Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:56:50 (26527): wrapper (7.7.26015): starting
14:56:50 (26527): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 14:56:50] Arguments: --nthreads 8
[2025-06-05 14:56:50] Threads: 8
[2025-06-05 14:56:50] Checking for CVMFS
[2025-06-05 14:56:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:56:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:56:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:56:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:56:52] 2.11.2.0 3391 34676 94184 146819 0 202 16275280 25165824 2592 130560 0 18354082 99.822 19926421 2025 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 14:56:52] CVMFS is ok
[2025-06-05 14:56:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:56:52] Checking for apptainer binary...
[2025-06-05 14:56:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:56:52] Running /usr/bin/apptainer --version
[2025-06-05 14:56:52] apptainer version 1.3.2-1.el7
[2025-06-05 14:56:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:56:53] cg-vwn306.simple-grid.lan
[2025-06-05 14:56:53] apptainer works
[2025-06-05 14:56:53] Set ATHENA_PROC_NUMBER=8
[2025-06-05 14:56:53] Set ATHENA_CORE_NUMBER=8
[2025-06-05 14:56:53] Starting ATLAS job with PandaID=6667667080
[2025-06-05 14:56:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 00:06:09]  *** The last 200 lines of the pilot log: ***
[2025-06-06 00:06:09] 2025-06-05 18:05:42,483 | INFO     | intersect: -11940930712.414185
[2025-06-06 00:06:09] 2025-06-05 18:05:42,483 | INFO     | chi2: 1.670940751442253
[2025-06-06 00:06:09] 2025-06-05 18:05:42,483 | INFO     | current chi2=1.670940751442253 (change=-0.027040156376566628 %)
[2025-06-06 00:06:09] 2025-06-05 18:05:42,483 | INFO     | right removable region: 295
[2025-06-06 00:06:09] 2025-06-05 18:05:42,484 | INFO     | sum of square deviations: 8041713570.0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,487 | INFO     | sum of deviations: 3387227398.000005
[2025-06-06 00:06:09] 2025-06-05 18:05:42,487 | INFO     | mean x: 1749137636.5
[2025-06-06 00:06:09] 2025-06-05 18:05:42,487 | INFO     | mean y: 2504554.9797297297
[2025-06-06 00:06:09] 2025-06-05 18:05:42,487 | INFO     | -- intersect: -734244755.18325
[2025-06-06 00:06:09] 2025-06-05 18:05:42,487 | INFO     | intersect: -734244755.18325
[2025-06-06 00:06:09] 2025-06-05 18:05:42,488 | INFO     | chi2: 0.06466898814656757
[2025-06-06 00:06:09] 2025-06-05 18:05:42,488 | INFO     | current chi2=0.06466898814656757 (change=96.12873917365076 %)
[2025-06-06 00:06:09] 2025-06-05 18:05:42,489 | INFO     | sum of square deviations: 7641036290.0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,491 | INFO     | sum of deviations: 6235755561.000001
[2025-06-06 00:06:09] 2025-06-05 18:05:42,492 | INFO     | mean x: 1749137789.0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,492 | INFO     | mean y: 2503450.711340206
[2025-06-06 00:06:09] 2025-06-05 18:05:42,492 | INFO     | -- intersect: -1424946345.4617908
[2025-06-06 00:06:09] 2025-06-05 18:05:42,492 | INFO     | intersect: -1424946345.4617908
[2025-06-06 00:06:09] 2025-06-05 18:05:42,492 | INFO     | chi2: 0.047428934225973954
[2025-06-06 00:06:09] 2025-06-05 18:05:42,493 | INFO     | current chi2=0.047428934225973954 (change=26.658920163587972 %)
[2025-06-06 00:06:09] 2025-06-05 18:05:42,493 | INFO     | sum of square deviations: 7253894147.5
[2025-06-06 00:06:09] 2025-06-05 18:05:42,496 | INFO     | sum of deviations: 15947904904.000006
[2025-06-06 00:06:09] 2025-06-05 18:05:42,496 | INFO     | mean x: 1749137941.5
[2025-06-06 00:06:09] 2025-06-05 18:05:42,496 | INFO     | mean y: 2499623.7762237764
[2025-06-06 00:06:09] 2025-06-05 18:05:42,496 | INFO     | -- intersect: -3843032856.8203063
[2025-06-06 00:06:09] 2025-06-05 18:05:42,496 | INFO     | intersect: -3843032856.8203063
[2025-06-06 00:06:09] 2025-06-05 18:05:42,497 | INFO     | chi2: 0.0034980365615202113
[2025-06-06 00:06:09] 2025-06-05 18:05:42,497 | INFO     | current chi2=0.0034980365615202113 (change=92.62467812400358 %)
[2025-06-06 00:06:09] 2025-06-05 18:05:42,497 | INFO     | sum of square deviations: 6880054580.0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,500 | INFO     | sum of deviations: 13748554967.000004
[2025-06-06 00:06:09] 2025-06-05 18:05:42,500 | INFO     | mean x: 1749138094.0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,500 | INFO     | mean y: 2500520.0533807827
[2025-06-06 00:06:09] 2025-06-05 18:05:42,500 | INFO     | -- intersect: -3492838208.8194094
[2025-06-06 00:06:09] 2025-06-05 18:05:42,500 | INFO     | intersect: -3492838208.8194094
[2025-06-06 00:06:09] 2025-06-05 18:05:42,501 | INFO     | chi2: 0.0026098427658215267
[2025-06-06 00:06:09] 2025-06-05 18:05:42,501 | INFO     | current chi2=0.0026098427658215267 (change=25.391209613677812 %)
[2025-06-06 00:06:09] 2025-06-05 18:05:42,502 | INFO     | sum of square deviations: 6519285025.0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,504 | INFO     | sum of deviations: 12304150912.000004
[2025-06-06 00:06:09] 2025-06-05 18:05:42,504 | INFO     | mean x: 1749138246.5
[2025-06-06 00:06:09] 2025-06-05 18:05:42,505 | INFO     | mean y: 2501130.2391304346
[2025-06-06 00:06:09] 2025-06-05 18:05:42,505 | INFO     | -- intersect: -3298729122.519616
[2025-06-06 00:06:09] 2025-06-05 18:05:42,505 | INFO     | intersect: -3298729122.519616
[2025-06-06 00:06:09] 2025-06-05 18:05:42,505 | INFO     | chi2: 0.0023579403562835155
[2025-06-06 00:06:09] 2025-06-05 18:05:42,505 | INFO     | current chi2=0.0023579403562835155 (change=9.65201478176856 %)
[2025-06-06 00:06:09] 2025-06-05 18:05:42,505 | INFO     | left removable region: 50
[2025-06-06 00:06:09] 2025-06-05 18:05:42,506 | INFO     | sum of square deviations: 4560048290.0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,508 | INFO     | sum of deviations: 6284029801.999997
[2025-06-06 00:06:09] 2025-06-05 18:05:42,508 | INFO     | mean x: 1749138826.0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,508 | INFO     | mean y: 2503798.3673469387
[2025-06-06 00:06:09] 2025-06-05 18:05:42,508 | INFO     | -- intersect: -2407918155.8307056
[2025-06-06 00:06:09] 2025-06-05 18:05:42,508 | INFO     | intersect: -2407918155.8307056
[2025-06-06 00:06:09] 2025-06-05 18:05:42,509 | INFO     | chi2: 0.001268520093139909
[2025-06-06 00:06:09] 2025-06-05 18:05:42,509 | INFO     | -- intersect: -2407918155.8307056
[2025-06-06 00:06:09] 2025-06-05 18:05:42,509 | INFO     | current memory leak: 1.38 B/s (using 245 data points, chi2=0.00)
[2025-06-06 00:06:09] 2025-06-05 18:05:42,510 | INFO     | ..............................
[2025-06-06 00:06:09] 2025-06-05 18:05:42,510 | INFO     | . Timing measurements:
[2025-06-06 00:06:09] 2025-06-05 18:05:42,510 | INFO     | . get job = 0 s
[2025-06-06 00:06:09] 2025-06-05 18:05:42,510 | INFO     | . initial setup = 2 s
[2025-06-06 00:06:09] 2025-06-05 18:05:42,511 | INFO     | . payload setup = 21 s
[2025-06-06 00:06:09] 2025-06-05 18:05:42,511 | INFO     | . stage-in = 0 s
[2025-06-06 00:06:09] 2025-06-05 18:05:42,511 | INFO     | . payload execution = 18403 s
[2025-06-06 00:06:09] 2025-06-05 18:05:42,511 | INFO     | . stage-out = 1 s
[2025-06-06 00:06:09] 2025-06-05 18:05:42,511 | INFO     | . log creation = 0 s
[2025-06-06 00:06:09] 2025-06-05 18:05:42,511 | INFO     | ..............................
[2025-06-06 00:06:09] 2025-06-05 18:05:42,651 | INFO     | 
[2025-06-06 00:06:09] 2025-06-05 18:05:42,651 | INFO     | job summary report
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | --------------------------------------------------
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | PanDA job id: 6667667080
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | task id: 44871837
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | errors: (none)
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | pilot state: finished 
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | transexitcode: 0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | exeerrorcode: 0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | exeerrordiag: 
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | exitcode: 0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | exitmsg: OK
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | cpuconsumptiontime: 68937 s
[2025-06-06 00:06:09] 2025-06-05 18:05:42,652 | INFO     | nevents: 400
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | neventsw: 0
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | pid: 7402
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | pgrp: 7402
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | corecount: 8
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | event service: False
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | sizes: {0: 2397392, 1: 2397392, 12: 2397420, 13: 2397654, 22: 2397710, 18429: 2429496, 18431: 2438493, 18475: 2438607}
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | --------------------------------------------------
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | 
[2025-06-06 00:06:09] 2025-06-05 18:05:42,653 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-06 00:06:09] 2025-06-05 18:05:43,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,155 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 00:06:09] 2025-06-05 18:05:43,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,155 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 00:06:09] 2025-06-05 18:05:43,155 | INFO     | job 6667667080 has completed (purged errors)
[2025-06-06 00:06:09] 2025-06-05 18:05:43,155 | INFO     | overall cleanup function is called
[2025-06-06 00:06:09] 2025-06-05 18:05:44,165 | INFO     | --- collectZombieJob: --- 10, [7402]
[2025-06-06 00:06:09] 2025-06-05 18:05:44,165 | INFO     | zombie collector waiting for pid 7402
[2025-06-06 00:06:09] 2025-06-05 18:05:44,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 00:06:09] 2025-06-05 18:05:44,166 | INFO     | collected zombie processes
[2025-06-06 00:06:09] 2025-06-05 18:05:44,166 | INFO     | will attempt to kill all subprocesses of pid=7402
[2025-06-06 00:06:09] 2025-06-05 18:05:44,304 | INFO     | process IDs to be killed: [7402] (in reverse order)
[2025-06-06 00:06:09] 2025-06-05 18:05:44,955 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 00:06:09] 2025-06-05 18:05:44,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 00:06:09] 2025-06-05 18:05:44,959 | INFO     | did not find any defunct processes belonging to 7402
[2025-06-06 00:06:09] 2025-06-05 18:05:44,963 | INFO     | did not find any defunct processes belonging to 7402
[2025-06-06 00:06:09] 2025-06-05 18:05:44,967 | INFO     | ready for new job
[2025-06-06 00:06:09] 2025-06-05 18:05:44,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 00:06:09] 2025-06-05 18:05:44,969 | INFO     | **************************************
[2025-06-06 00:06:09] 2025-06-05 18:05:44,969 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 00:06:09] 2025-06-05 18:05:44,969 | INFO     | **************************************
[2025-06-06 00:06:09] 2025-06-05 18:05:44,970 | INFO     | 
[2025-06-06 00:06:09] 2025-06-05 18:05:44,970 | INFO     | pilot is running in a VM
[2025-06-06 00:06:09] 2025-06-05 18:05:44,970 | INFO     | architecture information:
[2025-06-06 00:06:09] 2025-06-05 18:05:44,975 | INFO     | executing command: cat /etc/os-release
[2025-06-06 00:06:09] 2025-06-05 18:05:45,114 | INFO     | cat /etc/os-release:
[2025-06-06 00:06:09] NAME="CentOS Linux"
[2025-06-06 00:06:09] VERSION="7 (Core)"
[2025-06-06 00:06:09] ID="centos"
[2025-06-06 00:06:09] ID_LIKE="rhel fedora"
[2025-06-06 00:06:09] VERSION_ID="7"
[2025-06-06 00:06:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 00:06:09] ANSI_COLOR="0;31"
[2025-06-06 00:06:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 00:06:09] HOME_URL="https://www.centos.org/"
[2025-06-06 00:06:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 00:06:09] 
[2025-06-06 00:06:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 00:06:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 00:06:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 00:06:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 00:06:09] 
[2025-06-06 00:06:09] 2025-06-05 18:05:45,114 | INFO     | **************************************
[2025-06-06 00:06:09] 2025-06-05 18:05:45,618 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-06 00:06:09] 2025-06-05 18:05:45,776 | INFO     | sufficient remaining disk space (497862836224 B)
[2025-06-06 00:06:09] 2025-06-05 18:05:45,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 00:06:09] 2025-06-05 18:05:45,777 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 00:06:09] 2025-06-05 18:05:45,777 | INFO     | update_server=False
[2025-06-06 00:06:09] 2025-06-05 18:05:45,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 00:06:09] 2025-06-05 18:05:45,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 00:06:09] 2025-06-05 18:05:45,835 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 00:06:09] 2025-06-05 18:05:45,835 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 00:06:09] 2025-06-05 18:05:45,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:06:09] 2025-06-05 18:05:45,836 | INFO     | will abort loop
[2025-06-06 00:06:09] 2025-06-05 18:05:46,161 | INFO     | all data control threads have been joined
[2025-06-06 00:06:09] 2025-06-05 18:05:46,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 00:06:09] 2025-06-05 18:05:46,674 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 00:06:09] 2025-06-05 18:05:46,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 00:06:09] 2025-06-05 18:05:46,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 00:06:09] 2025-06-05 18:05:46,783 | INFO     | [job] retrieve thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:46,809 | INFO     | all payload control threads have been joined
[2025-06-06 00:06:09] 2025-06-05 18:05:46,841 | INFO     | [job] job monitor thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:46,905 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:46,956 | INFO     | [data] copytool_in thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:47,168 | INFO     | [data] control thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:47,252 | INFO     | all job control threads have been joined
[2025-06-06 00:06:09] 2025-06-05 18:05:47,275 | INFO     | [payload] validate_post thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:47,342 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:47,542 | INFO     | [job] validate thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:47,602 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:47,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:06:09] 2025-06-05 18:05:47,815 | INFO     | [payload] control thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:48,258 | INFO     | [job] control thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:48,378 | INFO     | [payload] failed_post thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:48,555 | INFO     | [data] copytool_out thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:48,670 | INFO     | [job] queue monitor thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:49,787 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:56,132 | INFO     | job.realtimelogging is not enabled
[2025-06-06 00:06:09] 2025-06-05 18:05:57,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 00:06:09] 2025-06-05 18:05:58,983 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140188098647872)>', '<ExcThread(monitor, started 140187506034432)>']
[2025-06-06 00:06:09] 2025-06-05 18:05:59,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 00:06:09] 2025-06-05 18:05:59,752 | INFO     | [monitor] control thread has ended
[2025-06-06 00:06:09] 2025-06-05 18:06:04,009 | INFO     | all workflow threads have been joined
[2025-06-06 00:06:09] 2025-06-05 18:06:04,009 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 00:06:09] 2025-06-05 18:06:04,010 | INFO     | traces error code: 0
[2025-06-06 00:06:09] 2025-06-05 18:06:04,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 00:06:09] 2025-06-05 18:06:04,410 [wrapper] ==== pilot stdout END ====
[2025-06-06 00:06:09] 2025-06-05 18:06:04,486 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 00:06:09] 2025-06-05 18:06:04,555 [wrapper] pilotpid: 30175
[2025-06-06 00:06:09] 2025-06-05 18:06:04,656 [wrapper] Pilot exit status: 0
[2025-06-06 00:06:09] 2025-06-05 18:06:05,027 [wrapper] pandaids: 6667667080
[2025-06-06 00:06:09] 2025-06-05 18:06:05,512 [wrapper] cleanup supervisor_pilot 30142 30176
[2025-06-06 00:06:09] 2025-06-05 18:06:05,627 [wrapper] Test setup, not cleaning
[2025-06-06 00:06:09] 2025-06-05 18:06:05,748 [wrapper] apfmon messages muted
[2025-06-06 00:06:09] 2025-06-05 18:06:05,866 [wrapper] ==== wrapper stdout END ====
[2025-06-06 00:06:09] 2025-06-05 18:06:05,967 [wrapper] ==== wrapper stderr END ====
[2025-06-06 00:06:09]  *** Error codes and diagnostics ***
[2025-06-06 00:06:09]     "exeErrorCode": 0,
[2025-06-06 00:06:09]     "exeErrorDiag": "",
[2025-06-06 00:06:09]     "pilotErrorCode": 0,
[2025-06-06 00:06:09]     "pilotErrorDiag": "",
[2025-06-06 00:06:09]  *** Listing of results directory ***
[2025-06-06 00:06:09] total 413016
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc    503527 Apr  3 09:42 pilot3.tar.gz
[2025-06-06 00:06:09] -rwx------. 1 boinc boinc     37140 May 28 00:05 runpilot2-wrapper.sh
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc      5111 May 28 00:05 queuedata.json
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc       100 Jun  5 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 00:06:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 14:56 run_atlas
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc       105 Jun  5 14:56 job.xml
[2025-06-06 00:06:09] -rw-r--r--. 2 boinc boinc 221949135 Jun  5 14:56 EVNT.44871834._002904.pool.root.1
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc      6391 Jun  5 14:56 init_data.xml
[2025-06-06 00:06:09] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:56 start_atlas.sh
[2025-06-06 00:06:09] drwxrwx--x. 2 boinc boinc        68 Jun  5 14:56 shared
[2025-06-06 00:06:09] -rw-r--r--. 2 boinc boinc    517094 Jun  5 14:56 input.tar.gz
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc         0 Jun  5 14:56 boinc_lockfile
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc      2559 Jun  5 14:56 pandaJob.out
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc    983210 Jun  5 14:57 agis_schedconf.cvmfs.json
[2025-06-06 00:06:09] drwx------. 4 boinc boinc      4096 Jun  5 14:57 pilot3
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc 193103228 Jun  5 20:04 HITS.44871837._074084.pool.root.1
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc       531 Jun  5 20:04 boinc_task_state.xml
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc      1015 Jun  5 20:04 memory_monitor_summary.json
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc   1598969 Jun  5 20:04 agis_ddmendpoints.agis.ALL.json
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc    430422 Jun  5 20:04 log.44871837._074084.job.log.tgz.1
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc      7685 Jun  5 20:05 heartbeat.json
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc        95 Jun  5 20:05 pilot_heartbeat.json
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc      4674 Jun  5 20:06 pilotlog.txt
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc   1592254 Jun  5 20:06 log.44871837._074084.job.log.1
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc       357 Jun  5 20:06 output.list
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc       620 Jun  5 20:06 runtime_log
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc   2037760 Jun  5 20:06 result.tar.gz
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc      8659 Jun  5 20:06 runtime_log.err
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc       657 Jun  5 20:06 0VFNDmkbHe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm5TSKDmxpAvTo.diag
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc      8192 Jun  6 00:06 boinc_mmap_file
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc        28 Jun  6 00:06 wrapper_checkpoint.txt
[2025-06-06 00:06:09] -rw-r--r--. 1 boinc boinc     20504 Jun  6 00:06 stderr.txt
[2025-06-06 00:06:09] HITS file was successfully produced:
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc 193103228 Jun  5 20:04 shared/HITS.pool.root.1
[2025-06-06 00:06:09]  *** Contents of shared directory: ***
[2025-06-06 00:06:09] total 407844
[2025-06-06 00:06:09] -rw-r--r--. 2 boinc boinc 221949135 Jun  5 14:56 ATLAS.root_0
[2025-06-06 00:06:09] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:56 start_atlas.sh
[2025-06-06 00:06:09] -rw-r--r--. 2 boinc boinc    517094 Jun  5 14:56 input.tar.gz
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc 193103228 Jun  5 20:04 HITS.pool.root.1
[2025-06-06 00:06:09] -rw-------. 1 boinc boinc   2037760 Jun  5 20:06 result.tar.gz
00:06:11 (26527): run_atlas exited; CPU time 69159.652500
00:06:11 (26527): called boinc_finish(0)

</stderr_txt>
]]>

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