Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:36:15 (80525): wrapper (7.7.26015): starting
23:36:15 (80525): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 23:36:15] Arguments: --nthreads 9
[2025-06-04 23:36:15] Threads: 9
[2025-06-04 23:36:15] Checking for CVMFS
[2025-06-04 23:36:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:36:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:36:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:36:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:36:16] 2.11.2.0 6612 29691 235040 146804 1 93 18143418 18432001 10967 130560 0 67963025 99.525 66695307 28219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 23:36:16] CVMFS is ok
[2025-06-04 23:36:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:36:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:36:16] Further information can be found at the LHC@home message board.
[2025-06-04 23:36:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:36:16] Checking for apptainer binary...
[2025-06-04 23:36:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:36:16] Running /usr/bin/apptainer --version
[2025-06-04 23:36:16] apptainer version 1.3.2-1.el7
[2025-06-04 23:36:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:36:18] c-210-31-1.aglt2.org
[2025-06-04 23:36:18] apptainer works
[2025-06-04 23:36:18] Set ATHENA_PROC_NUMBER=9
[2025-06-04 23:36:18] Set ATHENA_CORE_NUMBER=9
[2025-06-04 23:36:18] Starting ATLAS job with PandaID=6680350811
[2025-06-04 23:36:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:12:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:12:35] 2025-06-05 06:12:22,660 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6680350811/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,660 | INFO     | extracted standard info from prmon json
[2025-06-05 02:12:35] 2025-06-05 06:12:22,660 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:12:35] 2025-06-05 06:12:22,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:12:35] 2025-06-05 06:12:22,661 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:12:35] 2025-06-05 06:12:22,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:12:35] 2025-06-05 06:12:22,662 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:12:35] 2025-06-05 06:12:22,663 | INFO     | sum of square deviations: 1110435020.1699293
[2025-06-05 02:12:35] 2025-06-05 06:12:22,663 | INFO     | sum of deviations: 9553393211.869284
[2025-06-05 02:12:35] 2025-06-05 06:12:22,663 | INFO     | mean x: 1749099268.3006537
[2025-06-05 02:12:35] 2025-06-05 06:12:22,663 | INFO     | mean y: 2490896.3071895423
[2025-06-05 02:12:35] 2025-06-05 06:12:22,663 | INFO     | -- intersect: -15045515311.306742
[2025-06-05 02:12:35] 2025-06-05 06:12:22,663 | INFO     | intersect: -15045515311.306742
[2025-06-05 02:12:35] 2025-06-05 06:12:22,663 | INFO     | chi2: 2.3948242497165544
[2025-06-05 02:12:35] 2025-06-05 06:12:22,664 | INFO     | sum of square deviations: 1005088934.7027025
[2025-06-05 02:12:35] 2025-06-05 06:12:22,664 | INFO     | sum of deviations: 19285123971.48648
[2025-06-05 02:12:35] 2025-06-05 06:12:22,664 | INFO     | mean x: 1749099115.8108108
[2025-06-05 02:12:35] 2025-06-05 06:12:22,664 | INFO     | mean y: 2504591.695945946
[2025-06-05 02:12:35] 2025-06-05 06:12:22,664 | INFO     | -- intersect: -33558299952.238686
[2025-06-05 02:12:35] 2025-06-05 06:12:22,664 | INFO     | intersect: -33558299952.238686
[2025-06-05 02:12:35] 2025-06-05 06:12:22,664 | INFO     | chi2: 1.6278363525079211
[2025-06-05 02:12:35] 2025-06-05 06:12:22,664 | INFO     | current chi2=1.6278363525079211 (change=32.02689705933168 %)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | sum of square deviations: 906626699.2027982
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | sum of deviations: 18607906775.055943
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | mean x: 1749098963.3216784
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | mean y: 2503542.4335664334
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | -- intersect: -35896583125.16138
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | intersect: -35896583125.16138
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | chi2: 1.6299188459273126
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | current chi2=1.6299188459273126 (change=-0.1279301458149093 %)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | right removable region: 142
[2025-06-05 02:12:35] 2025-06-05 06:12:22,665 | INFO     | sum of square deviations: 1005060874.7027025
[2025-06-05 02:12:35] 2025-06-05 06:12:22,666 | INFO     | sum of deviations: -15827492490.621624
[2025-06-05 02:12:35] 2025-06-05 06:12:22,666 | INFO     | mean x: 1749099420.8108108
[2025-06-05 02:12:35] 2025-06-05 06:12:22,666 | INFO     | mean y: 2527149.5135135134
[2025-06-05 02:12:35] 2025-06-05 06:12:22,666 | INFO     | -- intersect: 27546986042.535923
[2025-06-05 02:12:35] 2025-06-05 06:12:22,666 | INFO     | intersect: 27546986042.535923
[2025-06-05 02:12:35] 2025-06-05 06:12:22,666 | INFO     | chi2: 0.8427488077950376
[2025-06-05 02:12:35] 2025-06-05 06:12:22,666 | INFO     | current chi2=0.8427488077950376 (change=64.809575988936 %)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,666 | INFO     | sum of square deviations: 906588268.4615383
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | sum of deviations: -15707038383.461536
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | mean x: 1749099573.3076923
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | mean y: 2526892.3286713287
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | -- intersect: 30306442230.94377
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | intersect: 30306442230.94377
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | chi2: 0.8283379885821615
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | current chi2=0.8283379885821615 (change=1.7099780005124539 %)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | left removable region: 20
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | sum of square deviations: 562960772.6639338
[2025-06-05 02:12:35] 2025-06-05 06:12:22,667 | INFO     | sum of deviations: -1894325016.1885169
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | mean x: 1749099542.8114755
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | mean y: 2535684.9918032787
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | -- intersect: 5888137632.127164
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | intersect: 5888137632.127164
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | chi2: 0.021466835960275477
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | -- intersect: 5888137632.127164
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | current memory leak: -3.36 B/s (using 122 data points, chi2=0.02)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | ..............................
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | . Timing measurements:
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | . get job = 0 s
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | . initial setup = 2 s
[2025-06-05 02:12:35] 2025-06-05 06:12:22,668 | INFO     | . payload setup = 10 s
[2025-06-05 02:12:35] 2025-06-05 06:12:22,669 | INFO     | . stage-in = 0 s
[2025-06-05 02:12:35] 2025-06-05 06:12:22,669 | INFO     | . payload execution = 9298 s
[2025-06-05 02:12:35] 2025-06-05 06:12:22,669 | INFO     | . stage-out = 0 s
[2025-06-05 02:12:35] 2025-06-05 06:12:22,669 | INFO     | . log creation = 0 s
[2025-06-05 02:12:35] 2025-06-05 06:12:22,669 | INFO     | ..............................
[2025-06-05 02:12:35] 2025-06-05 06:12:22,724 | INFO     | 
[2025-06-05 02:12:35] 2025-06-05 06:12:22,724 | INFO     | job summary report
[2025-06-05 02:12:35] 2025-06-05 06:12:22,724 | INFO     | --------------------------------------------------
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | PanDA job id: 6680350811
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | task id: 45006595
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | errors: (none)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | pilot state: finished 
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | transexitcode: 0
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | exeerrorcode: 0
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | exeerrordiag: 
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | exitcode: 0
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | exitmsg: OK
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | cpuconsumptiontime: 36364 s
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | nevents: 400
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | neventsw: 0
[2025-06-05 02:12:35] 2025-06-05 06:12:22,725 | INFO     | pid: 102569
[2025-06-05 02:12:35] 2025-06-05 06:12:22,726 | INFO     | pgrp: 102569
[2025-06-05 02:12:35] 2025-06-05 06:12:22,726 | INFO     | corecount: 9
[2025-06-05 02:12:35] 2025-06-05 06:12:22,726 | INFO     | event service: False
[2025-06-05 02:12:35] 2025-06-05 06:12:22,726 | INFO     | sizes: {0: 2397239, 5: 2397445, 11: 2397501, 9312: 2425663, 9313: 2425662, 9314: 2434659, 9318: 2434843, 9331: 2435013}
[2025-06-05 02:12:35] 2025-06-05 06:12:22,726 | INFO     | --------------------------------------------------
[2025-06-05 02:12:35] 2025-06-05 06:12:22,726 | INFO     | 
[2025-06-05 02:12:35] 2025-06-05 06:12:22,726 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 02:12:35] 2025-06-05 06:12:22,754 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,755 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:12:35] 2025-06-05 06:12:22,756 | INFO     | job 6680350811 has completed (purged errors)
[2025-06-05 02:12:35] 2025-06-05 06:12:22,756 | INFO     | overall cleanup function is called
[2025-06-05 02:12:35] 2025-06-05 06:12:23,762 | INFO     | --- collectZombieJob: --- 10, [102569]
[2025-06-05 02:12:35] 2025-06-05 06:12:23,762 | INFO     | zombie collector waiting for pid 102569
[2025-06-05 02:12:35] 2025-06-05 06:12:23,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:12:35] 2025-06-05 06:12:23,763 | INFO     | collected zombie processes
[2025-06-05 02:12:35] 2025-06-05 06:12:23,763 | INFO     | will attempt to kill all subprocesses of pid=102569
[2025-06-05 02:12:35] 2025-06-05 06:12:23,899 | INFO     | process IDs to be killed: [102569] (in reverse order)
[2025-06-05 02:12:35] 2025-06-05 06:12:23,978 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:12:35] 2025-06-05 06:12:23,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:12:35] 2025-06-05 06:12:23,993 | INFO     | did not find any defunct processes belonging to 102569
[2025-06-05 02:12:35] 2025-06-05 06:12:23,998 | INFO     | did not find any defunct processes belonging to 102569
[2025-06-05 02:12:35] 2025-06-05 06:12:23,998 | INFO     | ready for new job
[2025-06-05 02:12:35] 2025-06-05 06:12:23,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:12:35] 2025-06-05 06:12:24,001 | INFO     | **************************************
[2025-06-05 02:12:35] 2025-06-05 06:12:24,001 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:12:35] 2025-06-05 06:12:24,001 | INFO     | **************************************
[2025-06-05 02:12:35] 2025-06-05 06:12:24,001 | INFO     | 
[2025-06-05 02:12:35] 2025-06-05 06:12:24,005 | INFO     | architecture information:
[2025-06-05 02:12:35] 2025-06-05 06:12:24,005 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:12:35] 2025-06-05 06:12:24,024 | INFO     | cat /etc/os-release:
[2025-06-05 02:12:35] NAME="CentOS Linux"
[2025-06-05 02:12:35] VERSION="7 (Core)"
[2025-06-05 02:12:35] ID="centos"
[2025-06-05 02:12:35] ID_LIKE="rhel fedora"
[2025-06-05 02:12:35] VERSION_ID="7"
[2025-06-05 02:12:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:12:35] ANSI_COLOR="0;31"
[2025-06-05 02:12:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:12:35] HOME_URL="https://www.centos.org/"
[2025-06-05 02:12:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:12:35] 
[2025-06-05 02:12:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:12:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:12:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:12:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:12:35] 
[2025-06-05 02:12:35] 2025-06-05 06:12:24,025 | INFO     | **************************************
[2025-06-05 02:12:35] 2025-06-05 06:12:24,527 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 02:12:35] 2025-06-05 06:12:24,553 | INFO     | sufficient remaining disk space (57017368576 B)
[2025-06-05 02:12:35] 2025-06-05 06:12:24,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:12:35] 2025-06-05 06:12:24,554 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:12:35] 2025-06-05 06:12:24,554 | INFO     | update_server=False
[2025-06-05 02:12:35] 2025-06-05 06:12:24,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:12:35] 2025-06-05 06:12:24,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:12:35] 2025-06-05 06:12:24,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:12:35] 2025-06-05 06:12:24,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:12:35] 2025-06-05 06:12:24,556 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:12:35] 2025-06-05 06:12:24,555 | INFO     | aborting loop
[2025-06-05 02:12:35] 2025-06-05 06:12:24,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:12:35] 2025-06-05 06:12:24,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:12:35] 2025-06-05 06:12:24,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:12:35] 2025-06-05 06:12:24,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:12:35] 2025-06-05 06:12:24,889 | INFO     | all data control threads have been joined
[2025-06-05 02:12:35] 2025-06-05 06:12:24,998 | INFO     | all job control threads have been joined
[2025-06-05 02:12:35] 2025-06-05 06:12:25,559 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:25,560 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:25,561 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:25,592 | INFO     | all payload control threads have been joined
[2025-06-05 02:12:35] 2025-06-05 06:12:25,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:25,835 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:25,898 | INFO     | [data] control thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:25,898 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:25,981 | INFO     | [job] validate thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:26,003 | INFO     | [job] control thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:26,201 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:26,340 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:26,502 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:26,561 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:26,598 | INFO     | [payload] control thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:26,975 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:28,806 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:12:35] 2025-06-05 06:12:29,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127363991360)>', '<ExcThread(monitor, started 140126755727104)>']
[2025-06-05 02:12:35] 2025-06-05 06:12:29,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:12:35] 2025-06-05 06:12:29,583 | INFO     | [monitor] control thread has ended
[2025-06-05 02:12:35] 2025-06-05 06:12:34,161 | INFO     | all workflow threads have been joined
[2025-06-05 02:12:35] 2025-06-05 06:12:34,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:12:35] 2025-06-05 06:12:34,162 | INFO     | traces error code: 0
[2025-06-05 02:12:35] 2025-06-05 06:12:34,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:12:35] 2025-06-05 06:12:34,367 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:12:35] 2025-06-05 06:12:34,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:12:35] 2025-06-05 06:12:34,375 [wrapper] pilotpid: 89575
[2025-06-05 02:12:35] 2025-06-05 06:12:34,409 [wrapper] Pilot exit status: 0
[2025-06-05 02:12:35] 2025-06-05 06:12:34,551 [wrapper] pandaids: 6680350811
[2025-06-05 02:12:35] 2025-06-05 06:12:34,634 [wrapper] cleanup supervisor_pilot  75966 89576
[2025-06-05 02:12:35] 2025-06-05 06:12:34,674 [wrapper] Test setup, not cleaning
[2025-06-05 02:12:35] 2025-06-05 06:12:34,679 [wrapper] apfmon messages muted
[2025-06-05 02:12:35] 2025-06-05 06:12:34,683 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:12:35] 2025-06-05 06:12:34,721 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:12:35]  *** Error codes and diagnostics ***
[2025-06-05 02:12:35]     "exeErrorCode": 0,
[2025-06-05 02:12:35]     "exeErrorDiag": "",
[2025-06-05 02:12:35]     "pilotErrorCode": 0,
[2025-06-05 02:12:35]     "pilotErrorDiag": "",
[2025-06-05 02:12:35]  *** Listing of results directory ***
[2025-06-05 02:12:35] total 388300
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 23:16 pilot3.tar.gz
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 23:33 queuedata.json
[2025-06-05 02:12:35] -rwx------ 1 boincer umatlas     37140 Jun  4 23:35 runpilot2-wrapper.sh
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas       100 Jun  4 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:12:35] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 23:36 run_atlas
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas       105 Jun  4 23:36 job.xml
[2025-06-05 02:12:35] -rw-r--r-- 2 boincer umatlas 213479454 Jun  4 23:36 EVNT.45006593._002169.pool.root.1
[2025-06-05 02:12:35] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 23:36 start_atlas.sh
[2025-06-05 02:12:35] drwxrwx--x 2 boincer umatlas      4096 Jun  4 23:36 shared
[2025-06-05 02:12:35] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 23:36 input.tar.gz
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas         0 Jun  4 23:36 boinc_lockfile
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas      2523 Jun  4 23:36 pandaJob.out
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas    987109 Jun  4 23:36 agis_schedconf.cvmfs.json
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas   1598969 Jun  4 23:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:12:35] drwx------ 4 boincer umatlas      4096 Jun  4 23:36 pilot3
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas      6354 Jun  5 02:02 init_data.xml
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas 177934299 Jun  5 02:11 HITS.45006595._057036.pool.root.1
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas       530 Jun  5 02:11 boinc_task_state.xml
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas      1057 Jun  5 02:12 memory_monitor_summary.json
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas    350593 Jun  5 02:12 log.45006595._057036.job.log.tgz.1
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas        95 Jun  5 02:12 pilot_heartbeat.json
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas      7748 Jun  5 02:12 heartbeat.json
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:12 boinc_mmap_file
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas        27 Jun  5 02:12 wrapper_checkpoint.txt
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas      4476 Jun  5 02:12 pilotlog.txt
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas    839523 Jun  5 02:12 log.45006595._057036.job.log.1
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas       357 Jun  5 02:12 output.list
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:12 runtime_log
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas   1208320 Jun  5 02:12 result.tar.gz
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas       660 Jun  5 02:12 ud2MDmLZGh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme4nKDmftWJWm.diag
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas      8669 Jun  5 02:12 runtime_log.err
[2025-06-05 02:12:35] -rw-r--r-- 1 boincer umatlas     20938 Jun  5 02:12 stderr.txt
[2025-06-05 02:12:35] HITS file was successfully produced:
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas 177934299 Jun  5 02:11 shared/HITS.pool.root.1
[2025-06-05 02:12:35]  *** Contents of shared directory: ***
[2025-06-05 02:12:35] total 383944
[2025-06-05 02:12:35] -rw-r--r-- 2 boincer umatlas 213479454 Jun  4 23:36 ATLAS.root_0
[2025-06-05 02:12:35] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 23:36 start_atlas.sh
[2025-06-05 02:12:35] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 23:36 input.tar.gz
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas 177934299 Jun  5 02:11 HITS.pool.root.1
[2025-06-05 02:12:35] -rw------- 1 boincer umatlas   1208320 Jun  5 02:12 result.tar.gz
02:12:36 (80525): run_atlas exited; CPU time 36464.394688
02:12:36 (80525): called boinc_finish(0)

</stderr_txt>
]]>

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