Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:36:13 (80323): wrapper (7.7.26015): starting
23:36:13 (80323): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 23:36:13] Arguments: --nthreads 9
[2025-06-04 23:36:13] Threads: 9
[2025-06-04 23:36:13] Checking for CVMFS
[2025-06-04 23:36:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:36:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:36:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:36:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:36:14] 2.11.2.0 6612 29691 235028 146804 1 92 18143418 18432001 10967 130560 0 67963024 99.525 66695307 28219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 23:36:14] CVMFS is ok
[2025-06-04 23:36:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:36:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:36:14] Further information can be found at the LHC@home message board.
[2025-06-04 23:36:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:36:14] Checking for apptainer binary...
[2025-06-04 23:36:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:36:14] Running /usr/bin/apptainer --version
[2025-06-04 23:36:15] apptainer version 1.3.2-1.el7
[2025-06-04 23:36:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:36:18] c-210-31-1.aglt2.org
[2025-06-04 23:36:18] apptainer works
[2025-06-04 23:36:18] Set ATHENA_PROC_NUMBER=9
[2025-06-04 23:36:18] Set ATHENA_CORE_NUMBER=9
[2025-06-04 23:36:18] Starting ATLAS job with PandaID=6680350810
[2025-06-04 23:36:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:16:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:16:45] 2025-06-05 06:16:24,848 | INFO     | mean x: 1749099390.2738853
[2025-06-05 02:16:45] 2025-06-05 06:16:24,848 | INFO     | mean y: 2479123.2101910827
[2025-06-05 02:16:45] 2025-06-05 06:16:24,848 | INFO     | -- intersect: -18939445679.745426
[2025-06-05 02:16:45] 2025-06-05 06:16:24,848 | INFO     | intersect: -18939445679.745426
[2025-06-05 02:16:45] 2025-06-05 06:16:24,848 | INFO     | chi2: 2.463748441063322
[2025-06-05 02:16:45] 2025-06-05 06:16:24,849 | INFO     | sum of square deviations: 1088788011.8355253
[2025-06-05 02:16:45] 2025-06-05 06:16:24,850 | INFO     | sum of deviations: 23033887103.999996
[2025-06-05 02:16:45] 2025-06-05 06:16:24,850 | INFO     | mean x: 1749099237.7828948
[2025-06-05 02:16:45] 2025-06-05 06:16:24,851 | INFO     | mean y: 2492523.0
[2025-06-05 02:16:45] 2025-06-05 06:16:24,851 | INFO     | -- intersect: -37000628322.22632
[2025-06-05 02:16:45] 2025-06-05 06:16:24,851 | INFO     | intersect: -37000628322.22632
[2025-06-05 02:16:45] 2025-06-05 06:16:24,851 | INFO     | chi2: 1.6175394754203878
[2025-06-05 02:16:45] 2025-06-05 06:16:24,851 | INFO     | current chi2=1.6175394754203878 (change=34.34640288509818 %)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,851 | INFO     | sum of square deviations: 984836386.4217685
[2025-06-05 02:16:45] 2025-06-05 06:16:24,852 | INFO     | sum of deviations: 22007590014.489777
[2025-06-05 02:16:45] 2025-06-05 06:16:24,852 | INFO     | mean x: 1749099085.292517
[2025-06-05 02:16:45] 2025-06-05 06:16:24,853 | INFO     | mean y: 2491017.0816326533
[2025-06-05 02:16:45] 2025-06-05 06:16:24,853 | INFO     | -- intersect: -39083651711.352745
[2025-06-05 02:16:45] 2025-06-05 06:16:24,853 | INFO     | intersect: -39083651711.352745
[2025-06-05 02:16:45] 2025-06-05 06:16:24,853 | INFO     | chi2: 1.6194551166481128
[2025-06-05 02:16:45] 2025-06-05 06:16:24,853 | INFO     | current chi2=1.6194551166481128 (change=-0.11842933398748531 %)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,853 | INFO     | right removable region: 146
[2025-06-05 02:16:45] 2025-06-05 06:16:24,854 | INFO     | sum of square deviations: 1088761781.8355253
[2025-06-05 02:16:45] 2025-06-05 06:16:24,854 | INFO     | sum of deviations: -12762252745.822367
[2025-06-05 02:16:45] 2025-06-05 06:16:24,854 | INFO     | mean x: 1749099542.7828948
[2025-06-05 02:16:45] 2025-06-05 06:16:24,855 | INFO     | mean y: 2514037.914473684
[2025-06-05 02:16:45] 2025-06-05 06:16:24,855 | INFO     | -- intersect: 20505116916.722916
[2025-06-05 02:16:45] 2025-06-05 06:16:24,855 | INFO     | intersect: 20505116916.722916
[2025-06-05 02:16:45] 2025-06-05 06:16:24,855 | INFO     | chi2: 0.9321735435980167
[2025-06-05 02:16:45] 2025-06-05 06:16:24,855 | INFO     | current chi2=0.9321735435980167 (change=62.16441873441825 %)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,855 | INFO     | sum of square deviations: 984802225.564628
[2025-06-05 02:16:45] 2025-06-05 06:16:24,856 | INFO     | sum of deviations: -14526645373.625847
[2025-06-05 02:16:45] 2025-06-05 06:16:24,856 | INFO     | mean x: 1749099695.2789116
[2025-06-05 02:16:45] 2025-06-05 06:16:24,856 | INFO     | mean y: 2516541.088435374
[2025-06-05 02:16:45] 2025-06-05 06:16:24,856 | INFO     | -- intersect: 25803180204.15642
[2025-06-05 02:16:45] 2025-06-05 06:16:24,856 | INFO     | intersect: 25803180204.15642
[2025-06-05 02:16:45] 2025-06-05 06:16:24,857 | INFO     | chi2: 0.9079718284329236
[2025-06-05 02:16:45] 2025-06-05 06:16:24,857 | INFO     | current chi2=0.9079718284329236 (change=2.5962671147776892 %)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,857 | INFO     | left removable region: 20
[2025-06-05 02:16:45] 2025-06-05 06:16:24,857 | INFO     | sum of square deviations: 620150291.2142875
[2025-06-05 02:16:45] 2025-06-05 06:16:24,857 | INFO     | sum of deviations: -993253078.1428562
[2025-06-05 02:16:45] 2025-06-05 06:16:24,858 | INFO     | mean x: 1749099664.7857144
[2025-06-05 02:16:45] 2025-06-05 06:16:24,858 | INFO     | mean y: 2525478.365079365
[2025-06-05 02:16:45] 2025-06-05 06:16:24,858 | INFO     | -- intersect: 2803940958.8372808
[2025-06-05 02:16:45] 2025-06-05 06:16:24,858 | INFO     | sufficient remaining disk space (57231278080 B)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,858 | INFO     | intersect: 2803940958.8372808
[2025-06-05 02:16:45] 2025-06-05 06:16:24,859 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,859 | INFO     | chi2: 0.019516081401389215
[2025-06-05 02:16:45] 2025-06-05 06:16:24,859 | INFO     | -- intersect: 2803940958.8372808
[2025-06-05 02:16:45] 2025-06-05 06:16:24,859 | INFO     | current memory leak: -1.60 B/s (using 126 data points, chi2=0.02)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,860 | INFO     | ..............................
[2025-06-05 02:16:45] 2025-06-05 06:16:24,860 | INFO     | . Timing measurements:
[2025-06-05 02:16:45] 2025-06-05 06:16:24,860 | INFO     | . get job = 0 s
[2025-06-05 02:16:45] 2025-06-05 06:16:24,861 | INFO     | . initial setup = 2 s
[2025-06-05 02:16:45] 2025-06-05 06:16:24,861 | INFO     | . payload setup = 10 s
[2025-06-05 02:16:45] 2025-06-05 06:16:24,861 | INFO     | . stage-in = 0 s
[2025-06-05 02:16:45] 2025-06-05 06:16:24,861 | INFO     | . payload execution = 9550 s
[2025-06-05 02:16:45] 2025-06-05 06:16:24,861 | INFO     | . stage-out = 0 s
[2025-06-05 02:16:45] 2025-06-05 06:16:24,861 | INFO     | . log creation = 0 s
[2025-06-05 02:16:45] 2025-06-05 06:16:24,861 | INFO     | ..............................
[2025-06-05 02:16:45] 2025-06-05 06:16:24,958 | INFO     | 
[2025-06-05 02:16:45] 2025-06-05 06:16:24,959 | INFO     | job summary report
[2025-06-05 02:16:45] 2025-06-05 06:16:24,960 | INFO     | --------------------------------------------------
[2025-06-05 02:16:45] 2025-06-05 06:16:24,960 | INFO     | PanDA job id: 6680350810
[2025-06-05 02:16:45] 2025-06-05 06:16:24,959 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6680350810: 3783676 B (within 2537553920 B limit)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,961 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6680350810/HITS.45006595._057035.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,961 | INFO     | total size of present files: 0 B (workdir size: 3783676 B)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,961 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6680350810/HITS.45006595._057035.pool.root.1 since it does not exist
[2025-06-05 02:16:45] 2025-06-05 06:16:24,960 | INFO     | task id: 45006595
[2025-06-05 02:16:45] 2025-06-05 06:16:24,968 | INFO     | errors: (none)
[2025-06-05 02:16:45] 2025-06-05 06:16:24,968 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:16:45] 2025-06-05 06:16:24,968 | INFO     | pilot state: finished 
[2025-06-05 02:16:45] 2025-06-05 06:16:24,968 | INFO     | transexitcode: 0
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | exeerrorcode: 0
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | exeerrordiag: 
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | exitcode: 0
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | exitmsg: OK
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | cpuconsumptiontime: 37075 s
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | nevents: 400
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | neventsw: 0
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | pid: 102565
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | pgrp: 102565
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | corecount: 9
[2025-06-05 02:16:45] 2025-06-05 06:16:24,969 | INFO     | event service: False
[2025-06-05 02:16:45] 2025-06-05 06:16:24,970 | INFO     | sizes: {0: 2397241, 5: 2397447, 11: 2397503, 9565: 2425749, 9566: 2434690, 9567: 2434746, 9573: 2435044}
[2025-06-05 02:16:45] 2025-06-05 06:16:24,970 | INFO     | --------------------------------------------------
[2025-06-05 02:16:45] 2025-06-05 06:16:24,970 | INFO     | 
[2025-06-05 02:16:45] 2025-06-05 06:16:24,970 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 02:16:45] 2025-06-05 06:16:25,000 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,000 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,000 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,000 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | job 6680350810 has completed (purged errors)
[2025-06-05 02:16:45] 2025-06-05 06:16:25,001 | INFO     | overall cleanup function is called
[2025-06-05 02:16:45] 2025-06-05 06:16:25,104 | INFO     | number of running child processes to parent process 102565: 1
[2025-06-05 02:16:45] 2025-06-05 06:16:25,105 | INFO     | maximum number of monitored processes: 6
[2025-06-05 02:16:45] 2025-06-05 06:16:25,105 | INFO     | aborting job monitoring since job object (job id=6680350810) has expired
[2025-06-05 02:16:45] 2025-06-05 06:16:26,006 | INFO     | --- collectZombieJob: --- 10, [102565]
[2025-06-05 02:16:45] 2025-06-05 06:16:26,006 | INFO     | zombie collector waiting for pid 102565
[2025-06-05 02:16:45] 2025-06-05 06:16:26,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:16:45] 2025-06-05 06:16:26,007 | INFO     | collected zombie processes
[2025-06-05 02:16:45] 2025-06-05 06:16:26,007 | INFO     | will attempt to kill all subprocesses of pid=102565
[2025-06-05 02:16:45] 2025-06-05 06:16:26,169 | INFO     | process IDs to be killed: [102565] (in reverse order)
[2025-06-05 02:16:45] 2025-06-05 06:16:26,323 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:16:45] 2025-06-05 06:16:26,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:16:45] 2025-06-05 06:16:26,330 | INFO     | did not find any defunct processes belonging to 102565
[2025-06-05 02:16:45] 2025-06-05 06:16:26,336 | INFO     | did not find any defunct processes belonging to 102565
[2025-06-05 02:16:45] 2025-06-05 06:16:26,336 | INFO     | ready for new job
[2025-06-05 02:16:45] 2025-06-05 06:16:26,337 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:16:45] 2025-06-05 06:16:26,339 | INFO     | **************************************
[2025-06-05 02:16:45] 2025-06-05 06:16:26,339 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:16:45] 2025-06-05 06:16:26,339 | INFO     | **************************************
[2025-06-05 02:16:45] 2025-06-05 06:16:26,339 | INFO     | 
[2025-06-05 02:16:45] 2025-06-05 06:16:26,343 | INFO     | architecture information:
[2025-06-05 02:16:45] 2025-06-05 06:16:26,343 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:16:45] 2025-06-05 06:16:26,368 | INFO     | cat /etc/os-release:
[2025-06-05 02:16:45] NAME="CentOS Linux"
[2025-06-05 02:16:45] VERSION="7 (Core)"
[2025-06-05 02:16:45] ID="centos"
[2025-06-05 02:16:45] ID_LIKE="rhel fedora"
[2025-06-05 02:16:45] VERSION_ID="7"
[2025-06-05 02:16:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:16:45] ANSI_COLOR="0;31"
[2025-06-05 02:16:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:16:45] HOME_URL="https://www.centos.org/"
[2025-06-05 02:16:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:16:45] 
[2025-06-05 02:16:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:16:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:16:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:16:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:16:45] 
[2025-06-05 02:16:45] 2025-06-05 06:16:26,369 | INFO     | **************************************
[2025-06-05 02:16:45] 2025-06-05 06:16:26,872 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 02:16:45] 2025-06-05 06:16:26,914 | INFO     | sufficient remaining disk space (57235472384 B)
[2025-06-05 02:16:45] 2025-06-05 06:16:26,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:16:45] 2025-06-05 06:16:26,915 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:16:45] 2025-06-05 06:16:26,915 | INFO     | update_server=False
[2025-06-05 02:16:45] 2025-06-05 06:16:26,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:16:45] 2025-06-05 06:16:26,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:16:45] 2025-06-05 06:16:26,916 | INFO     | aborting loop
[2025-06-05 02:16:45] 2025-06-05 06:16:26,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:16:45] 2025-06-05 06:16:26,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:16:45] 2025-06-05 06:16:27,489 | INFO     | all payload control threads have been joined
[2025-06-05 02:16:45] 2025-06-05 06:16:27,500 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:16:45] 2025-06-05 06:16:27,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:16:45] 2025-06-05 06:16:27,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:16:45] 2025-06-05 06:16:27,683 | INFO     | all job control threads have been joined
[2025-06-05 02:16:45] 2025-06-05 06:16:27,773 | INFO     | all data control threads have been joined
[2025-06-05 02:16:45] 2025-06-05 06:16:27,920 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:27,928 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:27,934 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,018 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,428 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,456 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,465 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,493 | INFO     | [payload] control thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,637 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,689 | INFO     | [job] control thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,774 | INFO     | [data] control thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,898 | INFO     | [job] validate thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:28,922 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:29,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:16:45] 2025-06-05 06:16:29,439 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:33,412 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:37,034 | INFO     | job.realtimelogging is not enabled
[2025-06-05 02:16:45] 2025-06-05 06:16:38,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:16:45] 2025-06-05 06:16:39,531 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804328757056)>', '<ExcThread(monitor, started 139803467183872)>']
[2025-06-05 02:16:45] 2025-06-05 06:16:39,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:16:45] 2025-06-05 06:16:39,568 | INFO     | [monitor] control thread has ended
[2025-06-05 02:16:45] 2025-06-05 06:16:44,557 | INFO     | all workflow threads have been joined
[2025-06-05 02:16:45] 2025-06-05 06:16:44,557 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:16:45] 2025-06-05 06:16:44,558 | INFO     | traces error code: 0
[2025-06-05 02:16:45] 2025-06-05 06:16:44,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:16:45] 2025-06-05 06:16:44,763 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:16:45] 2025-06-05 06:16:44,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:16:45] 2025-06-05 06:16:44,770 [wrapper] pilotpid: 89553
[2025-06-05 02:16:45] 2025-06-05 06:16:44,773 [wrapper] Pilot exit status: 0
[2025-06-05 02:16:45] 2025-06-05 06:16:44,786 [wrapper] pandaids: 6680350810
[2025-06-05 02:16:45] 2025-06-05 06:16:44,850 [wrapper] cleanup supervisor_pilot  75967 89554
[2025-06-05 02:16:45] 2025-06-05 06:16:44,854 [wrapper] Test setup, not cleaning
[2025-06-05 02:16:45] 2025-06-05 06:16:44,857 [wrapper] apfmon messages muted
[2025-06-05 02:16:45] 2025-06-05 06:16:44,861 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:16:45] 2025-06-05 06:16:44,867 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:16:45]  *** Error codes and diagnostics ***
[2025-06-05 02:16:45]     "exeErrorCode": 0,
[2025-06-05 02:16:45]     "exeErrorDiag": "",
[2025-06-05 02:16:45]     "pilotErrorCode": 0,
[2025-06-05 02:16:45]     "pilotErrorDiag": "",
[2025-06-05 02:16:45]  *** Listing of results directory ***
[2025-06-05 02:16:45] total 387920
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 23:16 pilot3.tar.gz
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 23:33 queuedata.json
[2025-06-05 02:16:45] -rwx------ 1 boincer umatlas     37140 Jun  4 23:35 runpilot2-wrapper.sh
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:16:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 23:36 run_atlas
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 23:36 job.xml
[2025-06-05 02:16:45] -rw-r--r-- 2 boincer umatlas 216199708 Jun  4 23:36 EVNT.45006593._002079.pool.root.1
[2025-06-05 02:16:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 23:36 start_atlas.sh
[2025-06-05 02:16:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 23:36 shared
[2025-06-05 02:16:45] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 23:36 input.tar.gz
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 23:36 boinc_lockfile
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 23:36 pandaJob.out
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas    987109 Jun  4 23:36 agis_schedconf.cvmfs.json
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas   1598969 Jun  4 23:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:16:45] drwx------ 4 boincer umatlas      4096 Jun  4 23:36 pilot3
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas      6354 Jun  5 02:13 init_data.xml
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas 174754462 Jun  5 02:15 HITS.45006595._057035.pool.root.1
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas       530 Jun  5 02:15 boinc_task_state.xml
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas      1063 Jun  5 02:16 memory_monitor_summary.json
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas    363047 Jun  5 02:16 log.45006595._057035.job.log.tgz.1
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas        95 Jun  5 02:16 pilot_heartbeat.json
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas      7757 Jun  5 02:16 heartbeat.json
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:16 boinc_mmap_file
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas        27 Jun  5 02:16 wrapper_checkpoint.txt
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas      4425 Jun  5 02:16 pilotlog.txt
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas    860747 Jun  5 02:16 log.45006595._057035.job.log.1
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas       357 Jun  5 02:16 output.list
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:16 runtime_log
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas   1239040 Jun  5 02:16 result.tar.gz
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas      8669 Jun  5 02:16 runtime_log.err
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas       661 Jun  5 02:16 pC0MDmLZGh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd4nKDmMxtwFn.diag
[2025-06-05 02:16:45] -rw-r--r-- 1 boincer umatlas     21209 Jun  5 02:16 stderr.txt
[2025-06-05 02:16:45] HITS file was successfully produced:
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas 174754462 Jun  5 02:15 shared/HITS.pool.root.1
[2025-06-05 02:16:45]  *** Contents of shared directory: ***
[2025-06-05 02:16:45] total 383528
[2025-06-05 02:16:45] -rw-r--r-- 2 boincer umatlas 216199708 Jun  4 23:36 ATLAS.root_0
[2025-06-05 02:16:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 23:36 start_atlas.sh
[2025-06-05 02:16:45] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 23:36 input.tar.gz
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas 174754462 Jun  5 02:15 HITS.pool.root.1
[2025-06-05 02:16:45] -rw------- 1 boincer umatlas   1239040 Jun  5 02:16 result.tar.gz
02:16:46 (80323): run_atlas exited; CPU time 37182.702638
02:16:46 (80323): called boinc_finish(0)

</stderr_txt>
]]>

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