Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:31:24 (18484): wrapper (7.7.26015): starting
23:31:24 (18484): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 23:31:24] Arguments: --nthreads 12
[2025-06-04 23:31:24] Threads: 12
[2025-06-04 23:31:24] Checking for CVMFS
[2025-06-04 23:31:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:31:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:31:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:31:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:31:25] 2.11.2.0 2979 36585 95308 146804 2 1 19488599 20275200 1 130560 0 16284482 99.983 6348773 7667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 23:31:25] CVMFS is ok
[2025-06-04 23:31:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:31:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:31:25] Further information can be found at the LHC@home message board.
[2025-06-04 23:31:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:31:25] Checking for apptainer binary...
[2025-06-04 23:31:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:31:25] Running /usr/bin/apptainer --version
[2025-06-04 23:31:25] apptainer version 1.3.2-1.el7
[2025-06-04 23:31:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:31:26] c-205-7.aglt2.org
[2025-06-04 23:31:26] apptainer works
[2025-06-04 23:31:26] Set ATHENA_PROC_NUMBER=12
[2025-06-04 23:31:26] Set ATHENA_CORE_NUMBER=12
[2025-06-04 23:31:26] Starting ATLAS job with PandaID=6667667018
[2025-06-04 23:31:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:06:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:06:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 01:06:38]  replicas=None
[2025-06-05 01:06:38]  scope=mc23_13p6TeV
[2025-06-05 01:06:38]  status=None
[2025-06-05 01:06:38]  status_code=0
[2025-06-05 01:06:38]  storage_token=
[2025-06-05 01:06:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667667018/log.44871837._074022.job.log.tgz.1
[2025-06-05 01:06:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/12/log.44871837._074022.job.log.tgz.1
[2025-06-05 01:06:38]  workdir=None
[2025-06-05 01:06:38] ]
[2025-06-05 01:06:38] 2025-06-05 05:06:11,114 | INFO     | transferring file log.44871837._074022.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667667018/log.44871837._074022.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 01:06:38] 2025-06-05 05:06:11,114 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667667018/log.44871837._074022.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._074022.job
[2025-06-05 01:06:38] 2025-06-05 05:06:11,135 | INFO     | adding to output.list: log.44871837._074022.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/12/log.44871837._074022.job.log.tg
[2025-06-05 01:06:38] 2025-06-05 05:06:11,136 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 01:06:38] 2025-06-05 05:06:11,136 | INFO     | summary of transferred files:
[2025-06-05 01:06:38] 2025-06-05 05:06:11,136 | INFO     |  -- lfn=log.44871837._074022.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 01:06:38] 2025-06-05 05:06:11,137 | INFO     | stage-out finished correctly
[2025-06-05 01:06:38] 2025-06-05 05:06:12,112 | WARNING  | process 29533 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 01:06:38] 2025-06-05 05:06:12,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667667018/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:06:38] 2025-06-05 05:06:12,211 | INFO     | number of running child processes to parent process 29533: 1
[2025-06-05 01:06:38] 2025-06-05 05:06:12,211 | INFO     | maximum number of monitored processes: 6
[2025-06-05 01:06:38] 2025-06-05 05:06:12,464 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 01:06:38] 2025-06-05 05:06:14,712 | INFO     | monitor loop #422: job 0:6667667018 is in state 'finished'
[2025-06-05 01:06:38] 2025-06-05 05:06:14,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:06:38] 2025-06-05 05:06:15,241 | INFO     | job 6667667018 has state=finished
[2025-06-05 01:06:38] 2025-06-05 05:06:15,242 | INFO     | preparing for final server update for job 6667667018 in state='finished'
[2025-06-05 01:06:38] 2025-06-05 05:06:15,242 | INFO     | this job has now completed (state=finished)
[2025-06-05 01:06:38] 2025-06-05 05:06:15,242 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 01:06:38] 2025-06-05 05:06:15,243 | INFO     | log transfer has been attempted: DONE
[2025-06-05 01:06:38] 2025-06-05 05:06:15,243 | INFO     | job 6667667018 has finished - writing final server update
[2025-06-05 01:06:38] 2025-06-05 05:06:15,243 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:06:38] 2025-06-05 05:06:15,245 | INFO     | executing command: lscpu
[2025-06-05 01:06:38] 2025-06-05 05:06:15,281 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:06:38] 2025-06-05 05:06:17,215 | INFO     | monitor loop #423: job 0:6667667018 is in state 'finished'
[2025-06-05 01:06:38] 2025-06-05 05:06:17,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:06:38] 2025-06-05 05:06:19,718 | INFO     | monitor loop #424: job 0:6667667018 is in state 'finished'
[2025-06-05 01:06:38] 2025-06-05 05:06:19,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:06:38] 2025-06-05 05:06:19,939 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 01:06:38] 2025-06-05 05:06:19,939 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667667018/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:06:38] 2025-06-05 05:06:19,940 | INFO     | extracted standard info from prmon json
[2025-06-05 01:06:38] 2025-06-05 05:06:19,940 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:06:38] 2025-06-05 05:06:19,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:06:38] 2025-06-05 05:06:19,941 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:06:38] 2025-06-05 05:06:19,941 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:06:38] 2025-06-05 05:06:19,944 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:06:38] 2025-06-05 05:06:19,944 | INFO     | sum of square deviations: 197203697.5
[2025-06-05 01:06:38] 2025-06-05 05:06:19,945 | INFO     | sum of deviations: -11088701939.0
[2025-06-05 01:06:38] 2025-06-05 05:06:19,945 | INFO     | mean x: 1749097229.5
[2025-06-05 01:06:38] 2025-06-05 05:06:19,945 | INFO     | mean y: 2773241.302325581
[2025-06-05 01:06:38] 2025-06-05 05:06:19,945 | INFO     | -- intersect: 98353960800.83669
[2025-06-05 01:06:38] 2025-06-05 05:06:19,946 | INFO     | intersect: 98353960800.83669
[2025-06-05 01:06:38] 2025-06-05 05:06:19,946 | INFO     | chi2: 0.09904596112244947
[2025-06-05 01:06:38] 2025-06-05 05:06:19,946 | INFO     | -- intersect: 98353960800.83669
[2025-06-05 01:06:38] 2025-06-05 05:06:19,946 | INFO     | current memory leak: -56.23 B/s (using 86 data points, chi2=0.10)
[2025-06-05 01:06:38] 2025-06-05 05:06:19,947 | INFO     | ..............................
[2025-06-05 01:06:38] 2025-06-05 05:06:19,947 | INFO     | . Timing measurements:
[2025-06-05 01:06:38] 2025-06-05 05:06:19,947 | INFO     | . get job = 0 s
[2025-06-05 01:06:38] 2025-06-05 05:06:19,947 | INFO     | . initial setup = 2 s
[2025-06-05 01:06:38] 2025-06-05 05:06:19,947 | INFO     | . payload setup = 9 s
[2025-06-05 01:06:38] 2025-06-05 05:06:19,947 | INFO     | . stage-in = 0 s
[2025-06-05 01:06:38] 2025-06-05 05:06:19,947 | INFO     | . payload execution = 5639 s
[2025-06-05 01:06:38] 2025-06-05 05:06:19,948 | INFO     | . stage-out = 0 s
[2025-06-05 01:06:38] 2025-06-05 05:06:19,948 | INFO     | . log creation = 0 s
[2025-06-05 01:06:38] 2025-06-05 05:06:19,948 | INFO     | ..............................
[2025-06-05 01:06:38] 2025-06-05 05:06:20,032 | INFO     | 
[2025-06-05 01:06:38] 2025-06-05 05:06:20,033 | INFO     | job summary report
[2025-06-05 01:06:38] 2025-06-05 05:06:20,033 | INFO     | --------------------------------------------------
[2025-06-05 01:06:38] 2025-06-05 05:06:20,033 | INFO     | PanDA job id: 6667667018
[2025-06-05 01:06:38] 2025-06-05 05:06:20,033 | INFO     | task id: 44871837
[2025-06-05 01:06:38] 2025-06-05 05:06:20,033 | INFO     | errors: (none)
[2025-06-05 01:06:38] 2025-06-05 05:06:20,033 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:06:38] 2025-06-05 05:06:20,034 | INFO     | pilot state: finished 
[2025-06-05 01:06:38] 2025-06-05 05:06:20,034 | INFO     | transexitcode: 0
[2025-06-05 01:06:38] 2025-06-05 05:06:20,034 | INFO     | exeerrorcode: 0
[2025-06-05 01:06:38] 2025-06-05 05:06:20,034 | INFO     | exeerrordiag: 
[2025-06-05 01:06:38] 2025-06-05 05:06:20,034 | INFO     | exitcode: 0
[2025-06-05 01:06:38] 2025-06-05 05:06:20,034 | INFO     | exitmsg: OK
[2025-06-05 01:06:38] 2025-06-05 05:06:20,035 | INFO     | cpuconsumptiontime: 61025 s
[2025-06-05 01:06:38] 2025-06-05 05:06:20,035 | INFO     | nevents: 400
[2025-06-05 01:06:38] 2025-06-05 05:06:20,035 | INFO     | neventsw: 0
[2025-06-05 01:06:38] 2025-06-05 05:06:20,035 | INFO     | pid: 29533
[2025-06-05 01:06:38] 2025-06-05 05:06:20,035 | INFO     | pgrp: 29533
[2025-06-05 01:06:38] 2025-06-05 05:06:20,035 | INFO     | corecount: 12
[2025-06-05 01:06:38] 2025-06-05 05:06:20,036 | INFO     | event service: False
[2025-06-05 01:06:38] 2025-06-05 05:06:20,036 | INFO     | sizes: {0: 2397341, 5: 2397547, 11: 2397603, 5653: 2424182, 5654: 2433123, 5656: 2433179, 5663: 2433477}
[2025-06-05 01:06:38] 2025-06-05 05:06:20,036 | INFO     | --------------------------------------------------
[2025-06-05 01:06:38] 2025-06-05 05:06:20,036 | INFO     | 
[2025-06-05 01:06:38] 2025-06-05 05:06:20,036 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 01:06:38] 2025-06-05 05:06:20,059 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,060 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,060 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,062 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:06:38] 2025-06-05 05:06:20,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:06:38] 2025-06-05 05:06:20,063 | INFO     | job 6667667018 has completed (purged errors)
[2025-06-05 01:06:38] 2025-06-05 05:06:20,063 | INFO     | overall cleanup function is called
[2025-06-05 01:06:38] 2025-06-05 05:06:21,071 | INFO     | --- collectZombieJob: --- 10, [29533]
[2025-06-05 01:06:38] 2025-06-05 05:06:21,071 | INFO     | zombie collector waiting for pid 29533
[2025-06-05 01:06:38] 2025-06-05 05:06:21,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:06:38] 2025-06-05 05:06:21,072 | INFO     | collected zombie processes
[2025-06-05 01:06:38] 2025-06-05 05:06:21,072 | INFO     | will attempt to kill all subprocesses of pid=29533
[2025-06-05 01:06:38] 2025-06-05 05:06:21,161 | INFO     | process IDs to be killed: [29533] (in reverse order)
[2025-06-05 01:06:38] 2025-06-05 05:06:21,208 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:06:38] 2025-06-05 05:06:21,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:06:38] 2025-06-05 05:06:21,212 | INFO     | did not find any defunct processes belonging to 29533
[2025-06-05 01:06:38] 2025-06-05 05:06:21,215 | INFO     | did not find any defunct processes belonging to 29533
[2025-06-05 01:06:38] 2025-06-05 05:06:21,216 | INFO     | ready for new job
[2025-06-05 01:06:38] 2025-06-05 05:06:21,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:06:38] 2025-06-05 05:06:21,217 | INFO     | **************************************
[2025-06-05 01:06:38] 2025-06-05 05:06:21,217 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:06:38] 2025-06-05 05:06:21,217 | INFO     | **************************************
[2025-06-05 01:06:38] 2025-06-05 05:06:21,218 | INFO     | 
[2025-06-05 01:06:38] 2025-06-05 05:06:21,218 | INFO     | architecture information:
[2025-06-05 01:06:38] 2025-06-05 05:06:21,219 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:06:38] 2025-06-05 05:06:21,232 | INFO     | cat /etc/os-release:
[2025-06-05 01:06:38] NAME="CentOS Linux"
[2025-06-05 01:06:38] VERSION="7 (Core)"
[2025-06-05 01:06:38] ID="centos"
[2025-06-05 01:06:38] ID_LIKE="rhel fedora"
[2025-06-05 01:06:38] VERSION_ID="7"
[2025-06-05 01:06:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:06:38] ANSI_COLOR="0;31"
[2025-06-05 01:06:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:06:38] HOME_URL="https://www.centos.org/"
[2025-06-05 01:06:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:06:38] 
[2025-06-05 01:06:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:06:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:06:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:06:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:06:38] 
[2025-06-05 01:06:38] 2025-06-05 05:06:21,232 | INFO     | **************************************
[2025-06-05 01:06:38] 2025-06-05 05:06:21,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 01:06:38] 2025-06-05 05:06:21,751 | INFO     | sufficient remaining disk space (29376905216 B)
[2025-06-05 01:06:38] 2025-06-05 05:06:21,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:06:38] 2025-06-05 05:06:21,752 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:06:38] 2025-06-05 05:06:21,752 | INFO     | update_server=False
[2025-06-05 01:06:38] 2025-06-05 05:06:21,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:06:38] 2025-06-05 05:06:21,752 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:06:38] 2025-06-05 05:06:21,753 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:06:38] 2025-06-05 05:06:21,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:06:38] 2025-06-05 05:06:21,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:06:38] 2025-06-05 05:06:21,754 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:06:38] 2025-06-05 05:06:21,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:06:38] 2025-06-05 05:06:21,828 | INFO     | all payload control threads have been joined
[2025-06-05 01:06:38] 2025-06-05 05:06:22,221 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 01:06:38] 2025-06-05 05:06:22,221 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 01:06:38] 2025-06-05 05:06:22,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:06:38] 2025-06-05 05:06:22,235 | INFO     | will abort loop
[2025-06-05 01:06:38] 2025-06-05 05:06:22,756 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:22,758 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:22,825 | INFO     | all data control threads have been joined
[2025-06-05 01:06:38] 2025-06-05 05:06:22,834 | INFO     | [payload] control thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:22,903 | INFO     | [job] validate thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:22,946 | INFO     | all job control threads have been joined
[2025-06-05 01:06:38] 2025-06-05 05:06:23,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:06:38] 2025-06-05 05:06:23,173 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:23,240 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:23,292 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:23,604 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:23,620 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:23,733 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:23,760 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:23,831 | INFO     | [data] control thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:23,951 | INFO     | [job] control thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:24,207 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:27,059 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:32,209 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:06:38] 2025-06-05 05:06:33,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:06:38] 2025-06-05 05:06:33,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703468107584)>', '<ExcThread(monitor, started 140702516242176)>']
[2025-06-05 01:06:38] 2025-06-05 05:06:33,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:06:38] 2025-06-05 05:06:33,810 | INFO     | [monitor] control thread has ended
[2025-06-05 01:06:38] 2025-06-05 05:06:38,411 | INFO     | all workflow threads have been joined
[2025-06-05 01:06:38] 2025-06-05 05:06:38,411 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:06:38] 2025-06-05 05:06:38,411 | INFO     | traces error code: 0
[2025-06-05 01:06:38] 2025-06-05 05:06:38,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:06:38] 2025-06-05 05:06:38,500 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:06:38] 2025-06-05 05:06:38,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:06:38] 2025-06-05 05:06:38,508 [wrapper] pilotpid: 22899
[2025-06-05 01:06:38] 2025-06-05 05:06:38,511 [wrapper] Pilot exit status: 0
[2025-06-05 01:06:38] 2025-06-05 05:06:38,527 [wrapper] pandaids: 6667667018
[2025-06-05 01:06:38] 2025-06-05 05:06:38,565 [wrapper] cleanup supervisor_pilot 13466 22900
[2025-06-05 01:06:38] 2025-06-05 05:06:38,569 [wrapper] Test setup, not cleaning
[2025-06-05 01:06:38] 2025-06-05 05:06:38,573 [wrapper] apfmon messages muted
[2025-06-05 01:06:38] 2025-06-05 05:06:38,577 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:06:38] 2025-06-05 05:06:38,581 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:06:38]  *** Error codes and diagnostics ***
[2025-06-05 01:06:38]     "exeErrorCode": 0,
[2025-06-05 01:06:38]     "exeErrorDiag": "",
[2025-06-05 01:06:38]     "pilotErrorCode": 0,
[2025-06-05 01:06:38]     "pilotErrorDiag": "",
[2025-06-05 01:06:38]  *** Listing of results directory ***
[2025-06-05 01:06:38] total 423516
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas    495897 May 27 17:39 pilot3.tar.gz
[2025-06-05 01:06:38] -rwx------ 1 boincer umatlas     37140 May 27 18:00 runpilot2-wrapper.sh
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas      5111 May 27 18:00 queuedata.json
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas       100 Jun  4 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:06:38] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 23:31 run_atlas
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas       105 Jun  4 23:31 job.xml
[2025-06-05 01:06:38] -rw-r--r-- 2 boincer umatlas 225903002 Jun  4 23:31 EVNT.44871834._002902.pool.root.1
[2025-06-05 01:06:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 23:31 start_atlas.sh
[2025-06-05 01:06:38] drwxrwx--x 2 boincer umatlas      4096 Jun  4 23:31 shared
[2025-06-05 01:06:38] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 23:31 input.tar.gz
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas         0 Jun  4 23:31 boinc_lockfile
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 23:31 pandaJob.out
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas    987109 Jun  4 23:31 agis_schedconf.cvmfs.json
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas   1598969 Jun  4 23:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:06:38] drwx------ 4 boincer umatlas      4096 Jun  4 23:31 pilot3
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas      5867 Jun  5 01:03 init_data.xml
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas 202159533 Jun  5 01:05 HITS.44871837._074022.pool.root.1
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas       529 Jun  5 01:05 boinc_task_state.xml
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas        95 Jun  5 01:05 pilot_heartbeat.json
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas      1045 Jun  5 01:06 memory_monitor_summary.json
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas        27 Jun  5 01:06 wrapper_checkpoint.txt
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 01:06 boinc_mmap_file
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas    363554 Jun  5 01:06 log.44871837._074022.job.log.tgz.1
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas      7753 Jun  5 01:06 heartbeat.json
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas      4734 Jun  5 01:06 pilotlog.txt
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas    532062 Jun  5 01:06 log.44871837._074022.job.log.1
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas       357 Jun  5 01:06 output.list
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas       620 Jun  5 01:06 runtime_log
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas    911360 Jun  5 01:06 result.tar.gz
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas      8656 Jun  5 01:06 runtime_log.err
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas       658 Jun  5 01:06 PDIODmjWHe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmySSKDmVOe1Mm.diag
[2025-06-05 01:06:38] -rw-r--r-- 1 boincer umatlas     21786 Jun  5 01:06 stderr.txt
[2025-06-05 01:06:38] HITS file was successfully produced:
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas 202159533 Jun  5 01:05 shared/HITS.pool.root.1
[2025-06-05 01:06:38]  *** Contents of shared directory: ***
[2025-06-05 01:06:38] total 419448
[2025-06-05 01:06:38] -rw-r--r-- 2 boincer umatlas 225903002 Jun  4 23:31 ATLAS.root_0
[2025-06-05 01:06:38] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 23:31 start_atlas.sh
[2025-06-05 01:06:38] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 23:31 input.tar.gz
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas 202159533 Jun  5 01:05 HITS.pool.root.1
[2025-06-05 01:06:38] -rw------- 1 boincer umatlas    911360 Jun  5 01:06 result.tar.gz
01:06:40 (18484): run_atlas exited; CPU time 61009.906213
01:06:40 (18484): called boinc_finish(0)

</stderr_txt>
]]>

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