Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:31:17 (155038): wrapper (7.7.26015): starting
23:31:17 (155038): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 23:31:17] Arguments: --nthreads 9
[2025-06-04 23:31:17] Threads: 9
[2025-06-04 23:31:17] Checking for CVMFS
[2025-06-04 23:31:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:31:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:31:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:31:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:31:20] 2.11.2.0 5225 29686 256668 146804 1 282 13944716 18432001 11444 130560 0 59900977 99.427 71342904 29633 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 23:31:20] CVMFS is ok
[2025-06-04 23:31:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:31:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:31:20] Further information can be found at the LHC@home message board.
[2025-06-04 23:31:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:31:20] Checking for apptainer binary...
[2025-06-04 23:31:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:31:20] Running /usr/bin/apptainer --version
[2025-06-04 23:31:20] apptainer version 1.3.2-1.el7
[2025-06-04 23:31:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:31:28] c-210-33-2.aglt2.org
[2025-06-04 23:31:28] apptainer works
[2025-06-04 23:31:28] Set ATHENA_PROC_NUMBER=9
[2025-06-04 23:31:28] Set ATHENA_CORE_NUMBER=9
[2025-06-04 23:31:28] Starting ATLAS job with PandaID=6668862964
[2025-06-04 23:31:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:38:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:38:51] 2025-06-05 09:38:30,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:38:51] 2025-06-05 09:38:31,373 | INFO     | PID=162303 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 05:38:51] 2025-06-05 09:38:31,374 | INFO     | .. there are 10 such processes running
[2025-06-05 05:38:51] 2025-06-05 09:38:33,361 | INFO     | monitor loop #1397: job 0:6668862964 is in state 'finished'
[2025-06-05 05:38:51] 2025-06-05 09:38:33,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:38:51] 2025-06-05 09:38:35,866 | INFO     | monitor loop #1398: job 0:6668862964 is in state 'finished'
[2025-06-05 05:38:51] 2025-06-05 09:38:35,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:38:51] 2025-06-05 09:38:36,478 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 05:38:51] 2025-06-05 09:38:36,478 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668862964/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:38:51] 2025-06-05 09:38:36,478 | INFO     | extracted standard info from prmon json
[2025-06-05 05:38:51] 2025-06-05 09:38:36,479 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:38:51] 2025-06-05 09:38:36,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:38:51] 2025-06-05 09:38:36,479 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:38:51] 2025-06-05 09:38:36,479 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:38:51] 2025-06-05 09:38:36,485 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:38:51] 2025-06-05 09:38:36,486 | INFO     | sum of square deviations: 13990490367.941023
[2025-06-05 05:38:51] 2025-06-05 09:38:36,488 | INFO     | sum of deviations: 98443670074.5619
[2025-06-05 05:38:51] 2025-06-05 09:38:36,488 | INFO     | mean x: 1749105380.0926967
[2025-06-05 05:38:51] 2025-06-05 09:38:36,489 | INFO     | mean y: 2494069.8314606743
[2025-06-05 05:38:51] 2025-06-05 09:38:36,489 | INFO     | -- intersect: -12305034003.527098
[2025-06-05 05:38:51] 2025-06-05 09:38:36,489 | INFO     | intersect: -12305034003.527098
[2025-06-05 05:38:51] 2025-06-05 09:38:36,489 | INFO     | chi2: 4.5155168474801295
[2025-06-05 05:38:51] 2025-06-05 09:38:36,490 | INFO     | sum of square deviations: 13409294200.35901
[2025-06-05 05:38:51] 2025-06-05 09:38:36,492 | INFO     | sum of deviations: 121706759895.11084
[2025-06-05 05:38:51] 2025-06-05 09:38:36,493 | INFO     | mean x: 1749105227.5982907
[2025-06-05 05:38:51] 2025-06-05 09:38:36,493 | INFO     | mean y: 2500098.8518518517
[2025-06-05 05:38:51] 2025-06-05 09:38:36,493 | INFO     | -- intersect: -15872901453.669004
[2025-06-05 05:38:51] 2025-06-05 09:38:36,493 | INFO     | intersect: -15872901453.669004
[2025-06-05 05:38:51] 2025-06-05 09:38:36,493 | INFO     | chi2: 3.685543297585105
[2025-06-05 05:38:51] 2025-06-05 09:38:36,493 | INFO     | current chi2=3.685543297585105 (change=18.380477316969568 %)
[2025-06-05 05:38:51] 2025-06-05 09:38:36,493 | INFO     | right removable region: 350
[2025-06-05 05:38:51] 2025-06-05 09:38:36,494 | INFO     | sum of square deviations: 13409187206.159626
[2025-06-05 05:38:51] 2025-06-05 09:38:36,496 | INFO     | sum of deviations: -9676314861.099733
[2025-06-05 05:38:51] 2025-06-05 09:38:36,496 | INFO     | mean x: 1749105532.6011395
[2025-06-05 05:38:51] 2025-06-05 09:38:36,497 | INFO     | mean y: 2522392.749287749
[2025-06-05 05:38:51] 2025-06-05 09:38:36,497 | INFO     | -- intersect: 1264708951.750088
[2025-06-05 05:38:51] 2025-06-05 09:38:36,497 | INFO     | intersect: 1264708951.750088
[2025-06-05 05:38:51] 2025-06-05 09:38:36,497 | INFO     | chi2: 1.092761530168464
[2025-06-05 05:38:51] 2025-06-05 09:38:36,497 | INFO     | current chi2=1.092761530168464 (change=75.79985709103762 %)
[2025-06-05 05:38:51] 2025-06-05 09:38:36,498 | INFO     | sum of square deviations: 12844231099.043337
[2025-06-05 05:38:51] 2025-06-05 09:38:36,500 | INFO     | sum of deviations: -31487439086.56648
[2025-06-05 05:38:51] 2025-06-05 09:38:36,500 | INFO     | mean x: 1749105685.1069365
[2025-06-05 05:38:51] 2025-06-05 09:38:36,500 | INFO     | mean y: 2528249.0693641617
[2025-06-05 05:38:51] 2025-06-05 09:38:36,500 | INFO     | -- intersect: 4290434492.0420456
[2025-06-05 05:38:51] 2025-06-05 09:38:36,501 | INFO     | intersect: 4290434492.0420456
[2025-06-05 05:38:51] 2025-06-05 09:38:36,501 | INFO     | chi2: 0.8976098184392981
[2025-06-05 05:38:51] 2025-06-05 09:38:36,501 | INFO     | current chi2=0.8976098184392981 (change=17.85858179863639 %)
[2025-06-05 05:38:51] 2025-06-05 09:38:36,501 | INFO     | left removable region: 20
[2025-06-05 05:38:51] 2025-06-05 09:38:36,502 | INFO     | sum of square deviations: 11143418845.396982
[2025-06-05 05:38:51] 2025-06-05 09:38:36,504 | INFO     | sum of deviations: 1687982548.7727292
[2025-06-05 05:38:51] 2025-06-05 09:38:36,504 | INFO     | mean x: 1749105807.1303031
[2025-06-05 05:38:51] 2025-06-05 09:38:36,504 | INFO     | mean y: 2532349.772727273
[2025-06-05 05:38:51] 2025-06-05 09:38:36,504 | INFO     | -- intersect: -262418660.26783714
[2025-06-05 05:38:51] 2025-06-05 09:38:36,504 | INFO     | intersect: -262418660.26783714
[2025-06-05 05:38:51] 2025-06-05 09:38:36,505 | INFO     | chi2: 0.022912708890153732
[2025-06-05 05:38:51] 2025-06-05 09:38:36,505 | INFO     | -- intersect: -262418660.26783714
[2025-06-05 05:38:51] 2025-06-05 09:38:36,505 | INFO     | current memory leak: 0.15 B/s (using 330 data points, chi2=0.02)
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | ..............................
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | . Timing measurements:
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | . get job = 0 s
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | . initial setup = 6 s
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | . payload setup = 62 s
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | . stage-in = 0 s
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | . payload execution = 21778 s
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | . stage-out = 4 s
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | . log creation = 0 s
[2025-06-05 05:38:51] 2025-06-05 09:38:36,506 | INFO     | ..............................
[2025-06-05 05:38:51] 2025-06-05 09:38:37,200 | INFO     | 
[2025-06-05 05:38:51] 2025-06-05 09:38:37,200 | INFO     | job summary report
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | --------------------------------------------------
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | PanDA job id: 6668862964
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | task id: 44871837
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | errors: (none)
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | pilot state: finished 
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | transexitcode: 0
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | exeerrorcode: 0
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | exeerrordiag: 
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | exitcode: 0
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | exitmsg: OK
[2025-06-05 05:38:51] 2025-06-05 09:38:37,201 | INFO     | cpuconsumptiontime: 52999 s
[2025-06-05 05:38:51] 2025-06-05 09:38:37,202 | INFO     | nevents: 400
[2025-06-05 05:38:51] 2025-06-05 09:38:37,202 | INFO     | neventsw: 0
[2025-06-05 05:38:51] 2025-06-05 09:38:37,202 | INFO     | pid: 176858
[2025-06-05 05:38:51] 2025-06-05 09:38:37,202 | INFO     | pgrp: 176858
[2025-06-05 05:38:51] 2025-06-05 09:38:37,220 | INFO     | corecount: 9
[2025-06-05 05:38:51] 2025-06-05 09:38:37,220 | INFO     | event service: False
[2025-06-05 05:38:51] 2025-06-05 09:38:37,220 | INFO     | sizes: {0: 2397221, 1: 2397420, 2: 2397420, 13: 2397448, 24: 2397504, 34: 2397678, 35: 2397894, 45: 2397922, 21846: 2431412, 21853: 2440409, 21892: 2440523}
[2025-06-05 05:38:51] 2025-06-05 09:38:37,221 | INFO     | --------------------------------------------------
[2025-06-05 05:38:51] 2025-06-05 09:38:37,221 | INFO     | 
[2025-06-05 05:38:51] 2025-06-05 09:38:37,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 05:38:51] 2025-06-05 09:38:37,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:38:51] 2025-06-05 09:38:37,475 | INFO     | job 6668862964 has completed (purged errors)
[2025-06-05 05:38:51] 2025-06-05 09:38:37,475 | INFO     | overall cleanup function is called
[2025-06-05 05:38:51] 2025-06-05 09:38:38,483 | INFO     | --- collectZombieJob: --- 10, [176858]
[2025-06-05 05:38:51] 2025-06-05 09:38:38,483 | INFO     | zombie collector waiting for pid 176858
[2025-06-05 05:38:51] 2025-06-05 09:38:38,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:38:51] 2025-06-05 09:38:38,483 | INFO     | collected zombie processes
[2025-06-05 05:38:51] 2025-06-05 09:38:38,483 | INFO     | will attempt to kill all subprocesses of pid=176858
[2025-06-05 05:38:51] 2025-06-05 09:38:39,339 | INFO     | process IDs to be killed: [176858] (in reverse order)
[2025-06-05 05:38:51] 2025-06-05 09:38:39,468 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:38:51] 2025-06-05 09:38:39,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:38:51] 2025-06-05 09:38:39,475 | INFO     | did not find any defunct processes belonging to 176858
[2025-06-05 05:38:51] 2025-06-05 09:38:39,481 | INFO     | did not find any defunct processes belonging to 176858
[2025-06-05 05:38:51] 2025-06-05 09:38:39,481 | INFO     | ready for new job
[2025-06-05 05:38:51] 2025-06-05 09:38:39,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:38:51] 2025-06-05 09:38:39,483 | INFO     | **************************************
[2025-06-05 05:38:51] 2025-06-05 09:38:39,484 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:38:51] 2025-06-05 09:38:39,484 | INFO     | **************************************
[2025-06-05 05:38:51] 2025-06-05 09:38:39,484 | INFO     | 
[2025-06-05 05:38:51] 2025-06-05 09:38:39,487 | INFO     | architecture information:
[2025-06-05 05:38:51] 2025-06-05 09:38:39,487 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:38:51] 2025-06-05 09:38:39,548 | INFO     | cat /etc/os-release:
[2025-06-05 05:38:51] NAME="CentOS Linux"
[2025-06-05 05:38:51] VERSION="7 (Core)"
[2025-06-05 05:38:51] ID="centos"
[2025-06-05 05:38:51] ID_LIKE="rhel fedora"
[2025-06-05 05:38:51] VERSION_ID="7"
[2025-06-05 05:38:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:38:51] ANSI_COLOR="0;31"
[2025-06-05 05:38:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:38:51] HOME_URL="https://www.centos.org/"
[2025-06-05 05:38:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:38:51] 
[2025-06-05 05:38:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:38:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:38:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:38:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:38:51] 
[2025-06-05 05:38:51] 2025-06-05 09:38:39,549 | INFO     | **************************************
[2025-06-05 05:38:51] 2025-06-05 09:38:40,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 05:38:51] 2025-06-05 09:38:40,227 | INFO     | sufficient remaining disk space (56790876160 B)
[2025-06-05 05:38:51] 2025-06-05 09:38:40,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:38:51] 2025-06-05 09:38:40,228 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:38:51] 2025-06-05 09:38:40,228 | INFO     | update_server=False
[2025-06-05 05:38:51] 2025-06-05 09:38:40,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:38:51] 2025-06-05 09:38:40,228 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:38:51] 2025-06-05 09:38:40,228 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:38:51] 2025-06-05 09:38:40,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:38:51] 2025-06-05 09:38:40,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:38:51] 2025-06-05 09:38:40,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:38:51] 2025-06-05 09:38:40,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:38:51] 2025-06-05 09:38:40,229 | INFO     | aborting loop
[2025-06-05 05:38:51] 2025-06-05 09:38:40,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:38:51] 2025-06-05 09:38:40,687 | INFO     | all payload control threads have been joined
[2025-06-05 05:38:51] 2025-06-05 09:38:41,057 | INFO     | all data control threads have been joined
[2025-06-05 05:38:51] 2025-06-05 09:38:41,234 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:41,239 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:41,325 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:41,497 | INFO     | all job control threads have been joined
[2025-06-05 05:38:51] 2025-06-05 09:38:41,693 | INFO     | [payload] control thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:41,759 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:41,948 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:42,001 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:42,007 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:42,063 | INFO     | [data] control thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:42,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:42,183 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:42,188 | INFO     | [job] validate thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:42,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:38:51] 2025-06-05 09:38:42,503 | INFO     | [job] control thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:42,594 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:43,222 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:44,238 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:38:51] 2025-06-05 09:38:45,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746687600448)>', '<ExcThread(monitor, started 139745745168128)>']
[2025-06-05 05:38:51] 2025-06-05 09:38:46,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:38:51] 2025-06-05 09:38:46,269 | INFO     | [monitor] control thread has ended
[2025-06-05 05:38:51] 2025-06-05 09:38:50,393 | INFO     | all workflow threads have been joined
[2025-06-05 05:38:51] 2025-06-05 09:38:50,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:38:51] 2025-06-05 09:38:50,394 | INFO     | traces error code: 0
[2025-06-05 05:38:51] 2025-06-05 09:38:50,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:38:51] 2025-06-05 09:38:51,031 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:38:51] 2025-06-05 09:38:51,051 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:38:51] 2025-06-05 09:38:51,068 [wrapper] pilotpid: 162303
[2025-06-05 05:38:51] 2025-06-05 09:38:51,071 [wrapper] Pilot exit status: 0
[2025-06-05 05:38:51] 2025-06-05 09:38:51,141 [wrapper] pandaids: 6668862964
[2025-06-05 05:38:51] 2025-06-05 09:38:51,313 [wrapper] cleanup supervisor_pilot 168689 162304
[2025-06-05 05:38:51] 2025-06-05 09:38:51,321 [wrapper] Test setup, not cleaning
[2025-06-05 05:38:51] 2025-06-05 09:38:51,325 [wrapper] apfmon messages muted
[2025-06-05 05:38:51] 2025-06-05 09:38:51,329 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:38:51] 2025-06-05 09:38:51,333 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:38:51]  *** Error codes and diagnostics ***
[2025-06-05 05:38:51]     "exeErrorCode": 0,
[2025-06-05 05:38:51]     "exeErrorDiag": "",
[2025-06-05 05:38:51]     "pilotErrorCode": 0,
[2025-06-05 05:38:51]     "pilotErrorDiag": "",
[2025-06-05 05:38:51]  *** Listing of results directory ***
[2025-06-05 05:38:51] total 410316
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas    495897 May 28 15:50 pilot3.tar.gz
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas      5111 May 28 15:52 queuedata.json
[2025-06-05 05:38:51] -rwx------ 1 boincer umatlas     37140 May 28 15:53 runpilot2-wrapper.sh
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas       100 Jun  4 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:38:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 23:31 run_atlas
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas       105 Jun  4 23:31 job.xml
[2025-06-05 05:38:51] -rw-r--r-- 2 boincer umatlas 225710230 Jun  4 23:31 EVNT.44871834._003488.pool.root.1
[2025-06-05 05:38:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 23:31 start_atlas.sh
[2025-06-05 05:38:51] drwxrwx--x 2 boincer umatlas      4096 Jun  4 23:31 shared
[2025-06-05 05:38:51] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 23:31 input.tar.gz
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas         0 Jun  4 23:31 boinc_lockfile
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 23:31 pandaJob.out
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas    987109 Jun  4 23:32 agis_schedconf.cvmfs.json
[2025-06-05 05:38:51] drwx------ 4 boincer umatlas      4096 Jun  4 23:32 pilot3
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas      6270 Jun  5 05:27 init_data.xml
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas 186008805 Jun  5 05:36 HITS.44871837._089658.pool.root.1
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas       530 Jun  5 05:36 boinc_task_state.xml
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas      1057 Jun  5 05:37 memory_monitor_summary.json
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas   1598969 Jun  5 05:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas    476919 Jun  5 05:37 log.44871837._089658.job.log.tgz.1
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas        95 Jun  5 05:38 pilot_heartbeat.json
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas      7752 Jun  5 05:38 heartbeat.json
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 05:38 boinc_mmap_file
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas        28 Jun  5 05:38 wrapper_checkpoint.txt
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas      4476 Jun  5 05:38 pilotlog.txt
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas   1827225 Jun  5 05:38 log.44871837._089658.job.log.1
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas       357 Jun  5 05:38 output.list
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas       620 Jun  5 05:38 runtime_log
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas   2324480 Jun  5 05:38 result.tar.gz
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 05:38 runtime_log.err
[2025-06-05 05:38:51] -rw------- 1 boincer umatlas       664 Jun  5 05:38 gH8MDmd1be7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQycKDmBzqFIn.diag
[2025-06-05 05:38:51] -rw-r--r-- 1 boincer umatlas     21293 Jun  5 05:38 stderr.txt
[2025-06-05 05:38:52] HITS file was successfully produced:
[2025-06-05 05:38:52] -rw------- 1 boincer umatlas 186008805 Jun  5 05:36 shared/HITS.pool.root.1
[2025-06-05 05:38:52]  *** Contents of shared directory: ***
[2025-06-05 05:38:52] total 404868
[2025-06-05 05:38:52] -rw-r--r-- 2 boincer umatlas 225710230 Jun  4 23:31 ATLAS.root_0
[2025-06-05 05:38:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 23:31 start_atlas.sh
[2025-06-05 05:38:52] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 23:31 input.tar.gz
[2025-06-05 05:38:52] -rw------- 1 boincer umatlas 186008805 Jun  5 05:36 HITS.pool.root.1
[2025-06-05 05:38:52] -rw------- 1 boincer umatlas   2324480 Jun  5 05:38 result.tar.gz
05:38:53 (155038): run_atlas exited; CPU time 53351.958008
05:38:53 (155038): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN