Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:31:02 (2953163): wrapper (7.7.26015): starting
23:31:02 (2953163): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 23:31:02] Arguments: --nthreads 8
[2025-06-04 23:31:02] Threads: 8
[2025-06-04 23:31:02] Checking for CVMFS
[2025-06-04 23:31:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:31:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:31:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:31:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:31:03] 2.12.6.0 20986 114445 947036 146804 0 252 26520156 32935937 38590 130560 1 722226365 99.694 565237749 20374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 23:31:03] CVMFS is ok
[2025-06-04 23:31:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:31:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:31:03] Further information can be found at the LHC@home message board.
[2025-06-04 23:31:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:31:03] Checking for apptainer binary...
[2025-06-04 23:31:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:31:03] Running /usr/bin/apptainer --version
[2025-06-04 23:31:03] apptainer version 1.4.1-1.el9
[2025-06-04 23:31:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:31:03] lc-10-10.aglt2.org
[2025-06-04 23:31:03] apptainer works
[2025-06-04 23:31:03] Set ATHENA_PROC_NUMBER=8
[2025-06-04 23:31:03] Set ATHENA_CORE_NUMBER=8
[2025-06-04 23:31:03] Starting ATLAS job with PandaID=6668992056
[2025-06-04 23:31:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:59:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:59:51] 2025-06-05 05:59:35,833 | INFO     | extracted standard info from prmon json
[2025-06-05 01:59:51] 2025-06-05 05:59:35,833 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:59:51] 2025-06-05 05:59:35,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:59:51] 2025-06-05 05:59:35,834 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:59:51] 2025-06-05 05:59:35,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:59:51] 2025-06-05 05:59:35,837 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:59:51] 2025-06-05 05:59:35,837 | INFO     | sum of square deviations: 964964888.4726006
[2025-06-05 01:59:51] 2025-06-05 05:59:35,838 | INFO     | sum of deviations: 2408040236.7397194
[2025-06-05 01:59:51] 2025-06-05 05:59:35,838 | INFO     | mean x: 1749098730.5136986
[2025-06-05 01:59:51] 2025-06-05 05:59:35,838 | INFO     | mean y: 2151674.6301369863
[2025-06-05 01:59:51] 2025-06-05 05:59:35,838 | INFO     | -- intersect: -4362670477.369793
[2025-06-05 01:59:51] 2025-06-05 05:59:35,838 | INFO     | intersect: -4362670477.369793
[2025-06-05 01:59:51] 2025-06-05 05:59:35,839 | INFO     | chi2: 2.3640119089314275
[2025-06-05 01:59:51] 2025-06-05 05:59:35,839 | INFO     | sum of square deviations: 869177655.9716343
[2025-06-05 01:59:51] 2025-06-05 05:59:35,840 | INFO     | sum of deviations: 12024395563.312056
[2025-06-05 01:59:51] 2025-06-05 05:59:35,840 | INFO     | mean x: 1749098578.0141845
[2025-06-05 01:59:51] 2025-06-05 05:59:35,840 | INFO     | mean y: 2166610.843971631
[2025-06-05 01:59:51] 2025-06-05 05:59:35,840 | INFO     | -- intersect: -24195249230.17664
[2025-06-05 01:59:51] 2025-06-05 05:59:35,840 | INFO     | intersect: -24195249230.17664
[2025-06-05 01:59:51] 2025-06-05 05:59:35,840 | INFO     | chi2: 1.6885495589711779
[2025-06-05 01:59:51] 2025-06-05 05:59:35,840 | INFO     | current chi2=1.6885495589711779 (change=28.572713504881193 %)
[2025-06-05 01:59:51] 2025-06-05 05:59:35,841 | INFO     | sum of square deviations: 779948685.9705864
[2025-06-05 01:59:51] 2025-06-05 05:59:35,841 | INFO     | sum of deviations: 12096848209.338234
[2025-06-05 01:59:51] 2025-06-05 05:59:35,842 | INFO     | mean x: 1749098425.514706
[2025-06-05 01:59:51] 2025-06-05 05:59:35,842 | INFO     | mean y: 2166769.580882353
[2025-06-05 01:59:51] 2025-06-05 05:59:35,842 | INFO     | -- intersect: -27126000169.137226
[2025-06-05 01:59:51] 2025-06-05 05:59:35,842 | INFO     | intersect: -27126000169.137226
[2025-06-05 01:59:51] 2025-06-05 05:59:35,842 | INFO     | chi2: 1.686915629107161
[2025-06-05 01:59:51] 2025-06-05 05:59:35,842 | INFO     | current chi2=1.686915629107161 (change=0.09676528919959179 %)
[2025-06-05 01:59:51] 2025-06-05 05:59:35,842 | INFO     | right removable region: 135
[2025-06-05 01:59:51] 2025-06-05 05:59:35,843 | INFO     | sum of square deviations: 869176435.9716343
[2025-06-05 01:59:51] 2025-06-05 05:59:35,843 | INFO     | sum of deviations: -19146053038.319145
[2025-06-05 01:59:51] 2025-06-05 05:59:35,843 | INFO     | mean x: 1749098883.0141845
[2025-06-05 01:59:51] 2025-06-05 05:59:35,844 | INFO     | mean y: 2185602.659574468
[2025-06-05 01:59:51] 2025-06-05 05:59:35,844 | INFO     | -- intersect: 38531002765.1019
[2025-06-05 01:59:51] 2025-06-05 05:59:35,844 | INFO     | intersect: 38531002765.1019
[2025-06-05 01:59:51] 2025-06-05 05:59:35,844 | INFO     | chi2: 0.8286322874698792
[2025-06-05 01:59:51] 2025-06-05 05:59:35,844 | INFO     | current chi2=0.8286322874698792 (change=64.94804935883614 %)
[2025-06-05 01:59:51] 2025-06-05 05:59:35,844 | INFO     | sum of square deviations: 779946245.9705864
[2025-06-05 01:59:51] 2025-06-05 05:59:35,845 | INFO     | sum of deviations: -19585348815.51471
[2025-06-05 01:59:51] 2025-06-05 05:59:35,845 | INFO     | mean x: 1749099035.514706
[2025-06-05 01:59:51] 2025-06-05 05:59:35,845 | INFO     | mean y: 2186262.007352941
[2025-06-05 01:59:51] 2025-06-05 05:59:35,845 | INFO     | -- intersect: 43924078187.78472
[2025-06-05 01:59:51] 2025-06-05 05:59:35,845 | INFO     | intersect: 43924078187.78472
[2025-06-05 01:59:51] 2025-06-05 05:59:35,846 | INFO     | chi2: 0.7904538292319652
[2025-06-05 01:59:51] 2025-06-05 05:59:35,846 | INFO     | current chi2=0.7904538292319652 (change=4.60740654391913 %)
[2025-06-05 01:59:51] 2025-06-05 05:59:35,846 | INFO     | left removable region: 20
[2025-06-05 01:59:51] 2025-06-05 05:59:35,846 | INFO     | sum of square deviations: 471549887.96521753
[2025-06-05 01:59:51] 2025-06-05 05:59:35,847 | INFO     | sum of deviations: -5127024409.173913
[2025-06-05 01:59:51] 2025-06-05 05:59:35,847 | INFO     | mean x: 1749099005.0173912
[2025-06-05 01:59:51] 2025-06-05 05:59:35,847 | INFO     | mean y: 2195928.086956522
[2025-06-05 01:59:51] 2025-06-05 05:59:35,847 | INFO     | -- intersect: 19019639302.916985
[2025-06-05 01:59:51] 2025-06-05 05:59:35,847 | INFO     | intersect: 19019639302.916985
[2025-06-05 01:59:51] 2025-06-05 05:59:35,847 | INFO     | chi2: 0.08021683280724613
[2025-06-05 01:59:51] 2025-06-05 05:59:35,848 | INFO     | -- intersect: 19019639302.916985
[2025-06-05 01:59:51] 2025-06-05 05:59:35,848 | INFO     | current memory leak: -10.87 B/s (using 115 data points, chi2=0.08)
[2025-06-05 01:59:51] 2025-06-05 05:59:35,848 | INFO     | ..............................
[2025-06-05 01:59:51] 2025-06-05 05:59:35,848 | INFO     | . Timing measurements:
[2025-06-05 01:59:51] 2025-06-05 05:59:35,849 | INFO     | . get job = 0 s
[2025-06-05 01:59:51] 2025-06-05 05:59:35,849 | INFO     | . initial setup = 2 s
[2025-06-05 01:59:51] 2025-06-05 05:59:35,849 | INFO     | . payload setup = 8 s
[2025-06-05 01:59:51] 2025-06-05 05:59:35,849 | INFO     | . stage-in = 0 s
[2025-06-05 01:59:51] 2025-06-05 05:59:35,849 | INFO     | . payload execution = 8862 s
[2025-06-05 01:59:51] 2025-06-05 05:59:35,849 | INFO     | . stage-out = 0 s
[2025-06-05 01:59:51] 2025-06-05 05:59:35,849 | INFO     | . log creation = 0 s
[2025-06-05 01:59:51] 2025-06-05 05:59:35,849 | INFO     | ..............................
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | 
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | job summary report
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | --------------------------------------------------
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | PanDA job id: 6668992056
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | task id: 44871837
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | errors: (none)
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | pilot state: finished 
[2025-06-05 01:59:51] 2025-06-05 05:59:35,991 | INFO     | transexitcode: 0
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | exeerrorcode: 0
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | exeerrordiag: 
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | exitcode: 0
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | exitmsg: OK
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | cpuconsumptiontime: 55495 s
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | nevents: 400
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | neventsw: 0
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | pid: 2980885
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | pgrp: 2980885
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | corecount: 8
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | event service: False
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | sizes: {0: 2397392, 6: 2397598, 11: 2397626, 8876: 2425629, 8878: 2434626, 8883: 2434740}
[2025-06-05 01:59:51] 2025-06-05 05:59:35,992 | INFO     | --------------------------------------------------
[2025-06-05 01:59:51] 2025-06-05 05:59:35,993 | INFO     | 
[2025-06-05 01:59:51] 2025-06-05 05:59:35,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-05 01:59:51] 2025-06-05 05:59:36,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,017 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,017 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,017 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:59:51] 2025-06-05 05:59:36,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,019 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:59:51] 2025-06-05 05:59:36,019 | INFO     | job 6668992056 has completed (purged errors)
[2025-06-05 01:59:51] 2025-06-05 05:59:36,019 | INFO     | overall cleanup function is called
[2025-06-05 01:59:51] 2025-06-05 05:59:37,027 | INFO     | --- collectZombieJob: --- 10, [2980885]
[2025-06-05 01:59:51] 2025-06-05 05:59:37,027 | INFO     | zombie collector waiting for pid 2980885
[2025-06-05 01:59:51] 2025-06-05 05:59:37,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:59:51] 2025-06-05 05:59:37,027 | INFO     | collected zombie processes
[2025-06-05 01:59:51] 2025-06-05 05:59:37,027 | INFO     | will attempt to kill all subprocesses of pid=2980885
[2025-06-05 01:59:51] 2025-06-05 05:59:37,603 | INFO     | process IDs to be killed: [2980885] (in reverse order)
[2025-06-05 01:59:51] 2025-06-05 05:59:37,773 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:59:51] 2025-06-05 05:59:37,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:59:51] 2025-06-05 05:59:37,798 | INFO     | did not find any defunct processes belonging to 2980885
[2025-06-05 01:59:51] 2025-06-05 05:59:37,821 | INFO     | did not find any defunct processes belonging to 2980885
[2025-06-05 01:59:51] 2025-06-05 05:59:37,822 | INFO     | ready for new job
[2025-06-05 01:59:51] 2025-06-05 05:59:37,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:59:51] 2025-06-05 05:59:37,824 | INFO     | **************************************
[2025-06-05 01:59:51] 2025-06-05 05:59:37,824 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:59:51] 2025-06-05 05:59:37,824 | INFO     | **************************************
[2025-06-05 01:59:51] 2025-06-05 05:59:37,824 | INFO     | 
[2025-06-05 01:59:51] 2025-06-05 05:59:37,842 | INFO     | architecture information:
[2025-06-05 01:59:51] 2025-06-05 05:59:37,843 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:59:51] 2025-06-05 05:59:37,860 | INFO     | cat /etc/os-release:
[2025-06-05 01:59:51] NAME="CentOS Linux"
[2025-06-05 01:59:51] VERSION="7 (Core)"
[2025-06-05 01:59:51] ID="centos"
[2025-06-05 01:59:51] ID_LIKE="rhel fedora"
[2025-06-05 01:59:51] VERSION_ID="7"
[2025-06-05 01:59:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:59:51] ANSI_COLOR="0;31"
[2025-06-05 01:59:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:59:51] HOME_URL="https://www.centos.org/"
[2025-06-05 01:59:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:59:51] 
[2025-06-05 01:59:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:59:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:59:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:59:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:59:51] 
[2025-06-05 01:59:51] 2025-06-05 05:59:37,860 | INFO     | **************************************
[2025-06-05 01:59:51] 2025-06-05 05:59:38,363 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-05 01:59:51] 2025-06-05 05:59:38,384 | INFO     | sufficient remaining disk space (95961481216 B)
[2025-06-05 01:59:51] 2025-06-05 05:59:38,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:59:51] 2025-06-05 05:59:38,384 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:59:51] 2025-06-05 05:59:38,384 | INFO     | update_server=False
[2025-06-05 01:59:51] 2025-06-05 05:59:38,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:59:51] 2025-06-05 05:59:38,569 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 01:59:51] 2025-06-05 05:59:38,570 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 01:59:51] 2025-06-05 05:59:38,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:59:51] 2025-06-05 05:59:38,570 | INFO     | will abort loop
[2025-06-05 01:59:51] 2025-06-05 05:59:38,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:59:51] 2025-06-05 05:59:38,932 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:59:51] 2025-06-05 05:59:38,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:59:51] 2025-06-05 05:59:38,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:59:51] 2025-06-05 05:59:39,106 | INFO     | all data control threads have been joined
[2025-06-05 01:59:51] 2025-06-05 05:59:39,275 | INFO     | all payload control threads have been joined
[2025-06-05 01:59:51] 2025-06-05 05:59:39,391 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:39,475 | INFO     | all job control threads have been joined
[2025-06-05 01:59:51] 2025-06-05 05:59:39,575 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:39,600 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:39,651 | INFO     | [job] validate thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:39,784 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:39,807 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,111 | INFO     | [data] control thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,280 | INFO     | [payload] control thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,389 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,390 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,480 | INFO     | [job] control thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,495 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,598 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,602 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:40,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:59:51] 2025-06-05 05:59:41,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:59:51] 2025-06-05 05:59:41,973 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:45,192 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:59:51] 2025-06-05 05:59:45,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521988859712)>', '<ExcThread(monitor, started 140521062266624)>']
[2025-06-05 01:59:51] 2025-06-05 05:59:45,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:59:51] 2025-06-05 05:59:45,971 | INFO     | [monitor] control thread has ended
[2025-06-05 01:59:51] 2025-06-05 05:59:50,668 | INFO     | all workflow threads have been joined
[2025-06-05 01:59:51] 2025-06-05 05:59:50,668 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:59:51] 2025-06-05 05:59:50,669 | INFO     | traces error code: 0
[2025-06-05 01:59:51] 2025-06-05 05:59:50,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:59:51] 2025-06-05 05:59:50,856 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:59:51] 2025-06-05 05:59:50,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:59:51] 2025-06-05 05:59:50,864 [wrapper] pilotpid: 2959004
[2025-06-05 01:59:51] 2025-06-05 05:59:50,867 [wrapper] Pilot exit status: 0
[2025-06-05 01:59:51] 2025-06-05 05:59:50,879 [wrapper] pandaids: 6668992056
[2025-06-05 01:59:51] 2025-06-05 05:59:50,992 [wrapper] cleanup supervisor_pilot  202623 2959005
[2025-06-05 01:59:51] 2025-06-05 05:59:50,996 [wrapper] Test setup, not cleaning
[2025-06-05 01:59:51] 2025-06-05 05:59:50,999 [wrapper] apfmon messages muted
[2025-06-05 01:59:51] 2025-06-05 05:59:51,002 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:59:51] 2025-06-05 05:59:51,005 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:59:51]  *** Error codes and diagnostics ***
[2025-06-05 01:59:51]     "exeErrorCode": 0,
[2025-06-05 01:59:51]     "exeErrorDiag": "",
[2025-06-05 01:59:51]     "pilotErrorCode": 0,
[2025-06-05 01:59:51]     "pilotErrorDiag": "",
[2025-06-05 01:59:51]  *** Listing of results directory ***
[2025-06-05 01:59:51] total 417024
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas    495897 May 28 19:59 pilot3.tar.gz
[2025-06-05 01:59:51] -rwx------. 1 boincer umatlas     37140 May 28 20:02 runpilot2-wrapper.sh
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas      5111 May 28 20:02 queuedata.json
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas       100 Jun  4 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:59:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 23:31 run_atlas
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas       105 Jun  4 23:31 job.xml
[2025-06-05 01:59:51] -rw-r--r--. 2 boincer umatlas 224311240 Jun  4 23:31 EVNT.44871834._003586.pool.root.1
[2025-06-05 01:59:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 23:31 start_atlas.sh
[2025-06-05 01:59:51] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 23:31 shared
[2025-06-05 01:59:51] -rw-r--r--. 2 boincer umatlas    508870 Jun  4 23:31 input.tar.gz
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas         0 Jun  4 23:31 boinc_lockfile
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 23:31 pandaJob.out
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas    987109 Jun  4 23:31 agis_schedconf.cvmfs.json
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas   1598969 Jun  4 23:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:59:51] drwx------. 4 boincer umatlas      4096 Jun  4 23:31 pilot3
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas      6865 Jun  5 01:55 init_data.xml
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas 196629577 Jun  5 01:58 HITS.44871837._092212.pool.root.1
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas       529 Jun  5 01:58 boinc_task_state.xml
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas        95 Jun  5 01:59 pilot_heartbeat.json
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 01:59 boinc_mmap_file
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas        27 Jun  5 01:59 wrapper_checkpoint.txt
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas      1043 Jun  5 01:59 memory_monitor_summary.json
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas    357239 Jun  5 01:59 log.44871837._092212.job.log.tgz.1
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas      7722 Jun  5 01:59 heartbeat.json
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas      4539 Jun  5 01:59 pilotlog.txt
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas    771937 Jun  5 01:59 log.44871837._092212.job.log.1
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas       357 Jun  5 01:59 output.list
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas       620 Jun  5 01:59 runtime_log
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas   1146880 Jun  5 01:59 result.tar.gz
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas       652 Jun  5 01:59 wsvLDm8tfe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuLdKDma9lDrn.diag
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 01:59 runtime_log.err
[2025-06-05 01:59:51] -rw-r--r--. 1 boincer umatlas     20838 Jun  5 01:59 stderr.txt
[2025-06-05 01:59:51] HITS file was successfully produced:
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas 196629577 Jun  5 01:58 shared/HITS.pool.root.1
[2025-06-05 01:59:51]  *** Contents of shared directory: ***
[2025-06-05 01:59:51] total 412724
[2025-06-05 01:59:51] -rw-r--r--. 2 boincer umatlas 224311240 Jun  4 23:31 ATLAS.root_0
[2025-06-05 01:59:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 23:31 start_atlas.sh
[2025-06-05 01:59:51] -rw-r--r--. 2 boincer umatlas    508870 Jun  4 23:31 input.tar.gz
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas 196629577 Jun  5 01:58 HITS.pool.root.1
[2025-06-05 01:59:51] -rw-------. 1 boincer umatlas   1146880 Jun  5 01:59 result.tar.gz
01:59:52 (2953163): run_atlas exited; CPU time 56029.295394
01:59:52 (2953163): called boinc_finish(0)

</stderr_txt>
]]>

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