Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:23:35 (3028254): wrapper (7.7.26015): starting
02:23:35 (3028254): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 02:23:35] Arguments: --nthreads 12
[2025-06-05 02:23:35] Threads: 12
[2025-06-05 02:23:35] Checking for CVMFS
[2025-06-05 02:23:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:23:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:23:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:23:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:23:36] 2.12.6.0 665990 24378 426284 146809 1 66 31319384 32935937 11235 16776704 1 83741866 99.630 79089739 33909 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 02:23:36] CVMFS is ok
[2025-06-05 02:23:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:23:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:23:36] Further information can be found at the LHC@home message board.
[2025-06-05 02:23:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:23:36] Checking for apptainer binary...
[2025-06-05 02:23:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:23:36] Running /usr/bin/apptainer --version
[2025-06-05 02:23:36] apptainer version 1.4.1-1.el9
[2025-06-05 02:23:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:23:37] c6-6-39-1.aglt2.org
[2025-06-05 02:23:37] apptainer works
[2025-06-05 02:23:37] Set ATHENA_PROC_NUMBER=12
[2025-06-05 02:23:37] Set ATHENA_CORE_NUMBER=12
[2025-06-05 02:23:57] Starting ATLAS job with PandaID=6668326663
[2025-06-05 02:23:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:32:22]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:32:22] 2025-06-05 08:32:08,084 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668326663/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,084 | INFO     | extracted standard info from prmon json
[2025-06-05 04:32:22] 2025-06-05 08:32:08,084 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:32:22] 2025-06-05 08:32:08,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:32:22] 2025-06-05 08:32:08,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:32:22] 2025-06-05 08:32:08,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:32:22] 2025-06-05 08:32:08,093 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:32:22] 2025-06-05 08:32:08,093 | INFO     | sum of square deviations: 605575816.7519985
[2025-06-05 04:32:22] 2025-06-05 08:32:08,094 | INFO     | sum of deviations: -9508285482.78401
[2025-06-05 04:32:22] 2025-06-05 08:32:08,095 | INFO     | mean x: 1749108500.272
[2025-06-05 04:32:22] 2025-06-05 08:32:08,095 | INFO     | mean y: 2434282.376
[2025-06-05 04:32:22] 2025-06-05 08:32:08,095 | INFO     | -- intersect: 27465590011.00258
[2025-06-05 04:32:22] 2025-06-05 08:32:08,095 | INFO     | intersect: 27465590011.00258
[2025-06-05 04:32:22] 2025-06-05 08:32:08,095 | INFO     | chi2: 2.074480608969502
[2025-06-05 04:32:22] 2025-06-05 08:32:08,096 | INFO     | sum of square deviations: 535765341.46666616
[2025-06-05 04:32:22] 2025-06-05 08:32:08,097 | INFO     | sum of deviations: -5748218011.033336
[2025-06-05 04:32:22] 2025-06-05 08:32:08,097 | INFO     | mean x: 1749108347.7666667
[2025-06-05 04:32:22] 2025-06-05 08:32:08,097 | INFO     | mean y: 2442463.8916666666
[2025-06-05 04:32:22] 2025-06-05 08:32:08,097 | INFO     | -- intersect: 18768598707.51397
[2025-06-05 04:32:22] 2025-06-05 08:32:08,098 | INFO     | intersect: 18768598707.51397
[2025-06-05 04:32:22] 2025-06-05 08:32:08,098 | INFO     | chi2: 2.0694466472491166
[2025-06-05 04:32:22] 2025-06-05 08:32:08,098 | INFO     | current chi2=2.0694466472491166 (change=0.2426613051295665 %)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,098 | INFO     | right removable region: 119
[2025-06-05 04:32:22] 2025-06-05 08:32:08,098 | INFO     | sum of square deviations: 535759486.36666626
[2025-06-05 04:32:22] 2025-06-05 08:32:08,100 | INFO     | sum of deviations: -31141844092.899994
[2025-06-05 04:32:22] 2025-06-05 08:32:08,100 | INFO     | mean x: 1749108652.7833333
[2025-06-05 04:32:22] 2025-06-05 08:32:08,100 | INFO     | mean y: 2480909.35
[2025-06-05 04:32:22] 2025-06-05 08:32:08,100 | INFO     | -- intersect: 101672111317.42847
[2025-06-05 04:32:22] 2025-06-05 08:32:08,100 | INFO     | intersect: 101672111317.42847
[2025-06-05 04:32:22] 2025-06-05 08:32:08,100 | INFO     | chi2: 0.28937967784861374
[2025-06-05 04:32:22] 2025-06-05 08:32:08,100 | INFO     | current chi2=0.28937967784861374 (change=86.05049974449445 %)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,101 | INFO     | sum of square deviations: 471546370.6434771
[2025-06-05 04:32:22] 2025-06-05 08:32:08,102 | INFO     | sum of deviations: -31708395458.052162
[2025-06-05 04:32:22] 2025-06-05 08:32:08,102 | INFO     | mean x: 1749108805.269565
[2025-06-05 04:32:22] 2025-06-05 08:32:08,102 | INFO     | mean y: 2482100.356521739
[2025-06-05 04:32:22] 2025-06-05 08:32:08,102 | INFO     | -- intersect: 117618557950.89328
[2025-06-05 04:32:22] 2025-06-05 08:32:08,102 | INFO     | intersect: 117618557950.89328
[2025-06-05 04:32:22] 2025-06-05 08:32:08,103 | INFO     | chi2: 0.22622007499657978
[2025-06-05 04:32:22] 2025-06-05 08:32:08,103 | INFO     | current chi2=0.22622007499657978 (change=21.825859825953398 %)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,103 | INFO     | left removable region: 20
[2025-06-05 04:32:22] 2025-06-05 08:32:08,103 | INFO     | sum of square deviations: 300827984.18181884
[2025-06-05 04:32:22] 2025-06-05 08:32:08,104 | INFO     | sum of deviations: -21181608692.272736
[2025-06-05 04:32:22] 2025-06-05 08:32:08,104 | INFO     | mean x: 1749108927.2424242
[2025-06-05 04:32:22] 2025-06-05 08:32:08,104 | INFO     | mean y: 2477326.303030303
[2025-06-05 04:32:22] 2025-06-05 08:32:08,104 | INFO     | -- intersect: 123159041227.0131
[2025-06-05 04:32:22] 2025-06-05 08:32:08,104 | INFO     | intersect: 123159041227.0131
[2025-06-05 04:32:22] 2025-06-05 08:32:08,105 | INFO     | chi2: 0.216289556038179
[2025-06-05 04:32:22] 2025-06-05 08:32:08,105 | INFO     | -- intersect: 123159041227.0131
[2025-06-05 04:32:22] 2025-06-05 08:32:08,105 | INFO     | current memory leak: -70.41 B/s (using 99 data points, chi2=0.22)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,106 | INFO     | ..............................
[2025-06-05 04:32:22] 2025-06-05 08:32:08,117 | INFO     | . Timing measurements:
[2025-06-05 04:32:22] 2025-06-05 08:32:08,117 | INFO     | . get job = 0 s
[2025-06-05 04:32:22] 2025-06-05 08:32:08,118 | INFO     | . initial setup = 4 s
[2025-06-05 04:32:22] 2025-06-05 08:32:08,118 | INFO     | . payload setup = 15 s
[2025-06-05 04:32:22] 2025-06-05 08:32:08,118 | INFO     | . stage-in = 0 s
[2025-06-05 04:32:22] 2025-06-05 08:32:08,118 | INFO     | . payload execution = 7607 s
[2025-06-05 04:32:22] 2025-06-05 08:32:08,118 | INFO     | . stage-out = 1 s
[2025-06-05 04:32:22] 2025-06-05 08:32:08,118 | INFO     | . log creation = 0 s
[2025-06-05 04:32:22] 2025-06-05 08:32:08,118 | INFO     | ..............................
[2025-06-05 04:32:22] 2025-06-05 08:32:08,136 | INFO     | sufficient remaining disk space (76553388032 B)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,136 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,137 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6668326663: 4877961 B (within 2537553920 B limit)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,137 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6668326663/HITS.44871837._082972.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,137 | INFO     | total size of present files: 0 B (workdir size: 4877961 B)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,137 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6668326663/HITS.44871837._082972.pool.root.1 since it does not exist
[2025-06-05 04:32:22] 2025-06-05 08:32:08,339 | INFO     | 
[2025-06-05 04:32:22] 2025-06-05 08:32:08,339 | INFO     | job summary report
[2025-06-05 04:32:22] 2025-06-05 08:32:08,339 | INFO     | --------------------------------------------------
[2025-06-05 04:32:22] 2025-06-05 08:32:08,339 | INFO     | PanDA job id: 6668326663
[2025-06-05 04:32:22] 2025-06-05 08:32:08,339 | INFO     | task id: 44871837
[2025-06-05 04:32:22] 2025-06-05 08:32:08,339 | INFO     | errors: (none)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | pilot state: finished 
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | transexitcode: 0
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | exeerrorcode: 0
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | exeerrordiag: 
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | exitcode: 0
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | exitmsg: OK
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | cpuconsumptiontime: 49628 s
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | nevents: 400
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | neventsw: 0
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | pid: 3040292
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | pgrp: 3040292
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | corecount: 12
[2025-06-05 04:32:22] 2025-06-05 08:32:08,340 | INFO     | event service: False
[2025-06-05 04:32:22] 2025-06-05 08:32:08,341 | INFO     | sizes: {0: 2397165, 1: 2397420, 12: 2397420, 13: 2397654, 23: 2397710, 7627: 2425206, 7628: 2434147, 7629: 2434203, 7636: 2434401}
[2025-06-05 04:32:22] 2025-06-05 08:32:08,341 | INFO     | --------------------------------------------------
[2025-06-05 04:32:22] 2025-06-05 08:32:08,341 | INFO     | 
[2025-06-05 04:32:22] 2025-06-05 08:32:08,341 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 04:32:22] 2025-06-05 08:32:08,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,378 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:32:22] 2025-06-05 08:32:08,379 | INFO     | job 6668326663 has completed (purged errors)
[2025-06-05 04:32:22] 2025-06-05 08:32:08,379 | INFO     | overall cleanup function is called
[2025-06-05 04:32:22] 2025-06-05 08:32:08,639 | INFO     | number of running child processes to parent process 3040292: 1
[2025-06-05 04:32:22] 2025-06-05 08:32:08,639 | INFO     | maximum number of monitored processes: 6
[2025-06-05 04:32:22] 2025-06-05 08:32:08,639 | INFO     | aborting job monitoring since job object (job id=6668326663) has expired
[2025-06-05 04:32:22] 2025-06-05 08:32:09,386 | INFO     | --- collectZombieJob: --- 10, [3040292]
[2025-06-05 04:32:22] 2025-06-05 08:32:09,387 | INFO     | zombie collector waiting for pid 3040292
[2025-06-05 04:32:22] 2025-06-05 08:32:09,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:32:22] 2025-06-05 08:32:09,387 | INFO     | collected zombie processes
[2025-06-05 04:32:22] 2025-06-05 08:32:09,387 | INFO     | will attempt to kill all subprocesses of pid=3040292
[2025-06-05 04:32:22] 2025-06-05 08:32:09,671 | INFO     | process IDs to be killed: [3040292] (in reverse order)
[2025-06-05 04:32:22] 2025-06-05 08:32:09,779 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:32:22] 2025-06-05 08:32:09,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:32:22] 2025-06-05 08:32:09,803 | INFO     | did not find any defunct processes belonging to 3040292
[2025-06-05 04:32:22] 2025-06-05 08:32:09,820 | INFO     | did not find any defunct processes belonging to 3040292
[2025-06-05 04:32:22] 2025-06-05 08:32:09,820 | INFO     | ready for new job
[2025-06-05 04:32:22] 2025-06-05 08:32:09,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:32:22] 2025-06-05 08:32:09,822 | INFO     | **************************************
[2025-06-05 04:32:22] 2025-06-05 08:32:09,822 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:32:22] 2025-06-05 08:32:09,822 | INFO     | **************************************
[2025-06-05 04:32:22] 2025-06-05 08:32:09,822 | INFO     | 
[2025-06-05 04:32:22] 2025-06-05 08:32:09,838 | INFO     | architecture information:
[2025-06-05 04:32:22] 2025-06-05 08:32:09,846 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:32:22] 2025-06-05 08:32:09,877 | INFO     | cat /etc/os-release:
[2025-06-05 04:32:22] NAME="CentOS Linux"
[2025-06-05 04:32:22] VERSION="7 (Core)"
[2025-06-05 04:32:22] ID="centos"
[2025-06-05 04:32:22] ID_LIKE="rhel fedora"
[2025-06-05 04:32:22] VERSION_ID="7"
[2025-06-05 04:32:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:32:22] ANSI_COLOR="0;31"
[2025-06-05 04:32:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:32:22] HOME_URL="https://www.centos.org/"
[2025-06-05 04:32:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:32:22] 
[2025-06-05 04:32:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:32:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:32:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:32:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:32:22] 
[2025-06-05 04:32:22] 2025-06-05 08:32:09,877 | INFO     | **************************************
[2025-06-05 04:32:22] 2025-06-05 08:32:10,380 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 04:32:22] 2025-06-05 08:32:10,407 | INFO     | sufficient remaining disk space (76558630912 B)
[2025-06-05 04:32:22] 2025-06-05 08:32:10,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:32:22] 2025-06-05 08:32:10,408 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:32:22] 2025-06-05 08:32:10,408 | INFO     | update_server=False
[2025-06-05 04:32:22] 2025-06-05 08:32:10,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:32:22] 2025-06-05 08:32:10,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:32:22] 2025-06-05 08:32:10,409 | INFO     | aborting loop
[2025-06-05 04:32:22] 2025-06-05 08:32:10,897 | INFO     | all payload control threads have been joined
[2025-06-05 04:32:22] 2025-06-05 08:32:10,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:32:22] 2025-06-05 08:32:11,240 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:32:22] 2025-06-05 08:32:11,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:32:22] 2025-06-05 08:32:11,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:32:22] 2025-06-05 08:32:11,414 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:11,415 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:11,420 | INFO     | all data control threads have been joined
[2025-06-05 04:32:22] 2025-06-05 08:32:11,444 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:11,444 | INFO     | [job] validate thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:11,461 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:11,477 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:11,641 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:11,809 | INFO     | all job control threads have been joined
[2025-06-05 04:32:22] 2025-06-05 08:32:11,902 | INFO     | [payload] control thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:11,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:32:22] 2025-06-05 08:32:12,259 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:12,298 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:12,426 | INFO     | [data] control thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:12,613 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:12,815 | INFO     | [job] control thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:12,948 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:13,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:32:22] 2025-06-05 08:32:14,355 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:15,966 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:32:22] 2025-06-05 08:32:16,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101259032384)>', '<ExcThread(monitor, started 140100977526528)>']
[2025-06-05 04:32:22] 2025-06-05 08:32:17,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:32:22] 2025-06-05 08:32:17,274 | INFO     | [monitor] control thread has ended
[2025-06-05 04:32:22] 2025-06-05 08:32:21,778 | INFO     | all workflow threads have been joined
[2025-06-05 04:32:22] 2025-06-05 08:32:21,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:32:22] 2025-06-05 08:32:21,778 | INFO     | traces error code: 0
[2025-06-05 04:32:22] 2025-06-05 08:32:21,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:32:22] 2025-06-05 08:32:21,972 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:32:22] 2025-06-05 08:32:21,975 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:32:22] 2025-06-05 08:32:21,980 [wrapper] pilotpid: 3032598
[2025-06-05 04:32:22] 2025-06-05 08:32:21,984 [wrapper] Pilot exit status: 0
[2025-06-05 04:32:22] 2025-06-05 08:32:22,003 [wrapper] pandaids: 6668326663
[2025-06-05 04:32:22] 2025-06-05 08:32:22,066 [wrapper] cleanup supervisor_pilot 3375146 3032599
[2025-06-05 04:32:22] 2025-06-05 08:32:22,070 [wrapper] Test setup, not cleaning
[2025-06-05 04:32:22] 2025-06-05 08:32:22,078 [wrapper] apfmon messages muted
[2025-06-05 04:32:22] 2025-06-05 08:32:22,082 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:32:22] 2025-06-05 08:32:22,085 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:32:22]  *** Error codes and diagnostics ***
[2025-06-05 04:32:22]     "exeErrorCode": 0,
[2025-06-05 04:32:22]     "exeErrorDiag": "",
[2025-06-05 04:32:22]     "pilotErrorCode": 0,
[2025-06-05 04:32:22]     "pilotErrorDiag": "",
[2025-06-05 04:32:22]  *** Listing of results directory ***
[2025-06-05 04:32:22] total 412856
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas    495897 May 28 06:20 pilot3.tar.gz
[2025-06-05 04:32:22] -rwx------. 1 boincer umatlas     37140 May 28 06:34 runpilot2-wrapper.sh
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas      5111 May 28 06:34 queuedata.json
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas       100 Jun  5 02:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:32:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 02:23 run_atlas
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas       105 Jun  5 02:23 job.xml
[2025-06-05 04:32:22] -rw-r--r--. 2 boincer umatlas 222181578 Jun  5 02:23 EVNT.44871834._003238.pool.root.1
[2025-06-05 04:32:22] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 02:23 start_atlas.sh
[2025-06-05 04:32:22] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 02:23 shared
[2025-06-05 04:32:22] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 02:23 input.tar.gz
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas         0 Jun  5 02:23 boinc_lockfile
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 02:23 pandaJob.out
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas    986926 Jun  5 02:24 agis_schedconf.cvmfs.json
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas   1598969 Jun  5 02:24 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:32:22] drwx------. 4 boincer umatlas      4096 Jun  5 02:24 pilot3
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 04:29 init_data.xml
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas 194561025 Jun  5 04:31 HITS.44871837._082972.pool.root.1
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas        95 Jun  5 04:31 pilot_heartbeat.json
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas       530 Jun  5 04:31 boinc_task_state.xml
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas      1042 Jun  5 04:31 memory_monitor_summary.json
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas    406596 Jun  5 04:32 log.44871837._082972.job.log.tgz.1
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas      7729 Jun  5 04:32 heartbeat.json
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 04:32 boinc_mmap_file
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas        27 Jun  5 04:32 wrapper_checkpoint.txt
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas      4353 Jun  5 04:32 pilotlog.txt
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas    687075 Jun  5 04:32 log.44871837._082972.job.log.1
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas       357 Jun  5 04:32 output.list
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas       620 Jun  5 04:32 runtime_log
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas   1116160 Jun  5 04:32 result.tar.gz
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 04:32 runtime_log.err
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas       654 Jun  5 04:32 m6sNDm0HTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTLTKDmitudYn.diag
[2025-06-05 04:32:22] -rw-r--r--. 1 boincer umatlas     21348 Jun  5 04:32 stderr.txt
[2025-06-05 04:32:22] HITS file was successfully produced:
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas 194561025 Jun  5 04:31 shared/HITS.pool.root.1
[2025-06-05 04:32:22]  *** Contents of shared directory: ***
[2025-06-05 04:32:22] total 408592
[2025-06-05 04:32:22] -rw-r--r--. 2 boincer umatlas 222181578 Jun  5 02:23 ATLAS.root_0
[2025-06-05 04:32:22] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 02:23 start_atlas.sh
[2025-06-05 04:32:22] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 02:23 input.tar.gz
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas 194561025 Jun  5 04:31 HITS.pool.root.1
[2025-06-05 04:32:22] -rw-------. 1 boincer umatlas   1116160 Jun  5 04:32 result.tar.gz
04:32:23 (3028254): run_atlas exited; CPU time 49723.572603
04:32:23 (3028254): called boinc_finish(0)

</stderr_txt>
]]>

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