Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:57:27 (1242078): wrapper (7.7.26015): starting
22:57:27 (1242078): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:57:27] Arguments: --nthreads 8
[2025-06-04 22:57:27] Threads: 8
[2025-06-04 22:57:27] Checking for CVMFS
[2025-06-04 22:57:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:57:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:57:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:57:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:57:27] 2.12.6.0 6829 2206 176136 146802 0 313 28365521 32935936 7415 16776704 0 21631859 99.901 4316850 36066 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:57:27] CVMFS is ok
[2025-06-04 22:57:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:57:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:57:27] Further information can be found at the LHC@home message board.
[2025-06-04 22:57:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:57:27] Checking for apptainer binary...
[2025-06-04 22:57:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:57:27] Running /usr/bin/apptainer --version
[2025-06-04 22:57:27] apptainer version 1.4.1-1.el9
[2025-06-04 22:57:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:57:27] c6-8-25-3.aglt2.org
[2025-06-04 22:57:27] apptainer works
[2025-06-04 22:57:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:57:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:57:27] Starting ATLAS job with PandaID=6667820709
[2025-06-04 22:57:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:06:58]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:06:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 00:06:58]  is_altstaged=None
[2025-06-05 00:06:58]  is_tar=False
[2025-06-05 00:06:58]  lfn=log.44871837._075869.job.log.tgz.1
[2025-06-05 00:06:58]  mtime=0
[2025-06-05 00:06:58]  protocol_id=None
[2025-06-05 00:06:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 00:06:58]  replicas=None
[2025-06-05 00:06:58]  scope=mc23_13p6TeV
[2025-06-05 00:06:58]  status=None
[2025-06-05 00:06:58]  status_code=0
[2025-06-05 00:06:58]  storage_token=
[2025-06-05 00:06:58]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6667820709/log.44871837._075869.job.log.tgz.1
[2025-06-05 00:06:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/04/log.44871837._075869.job.log.tgz.1
[2025-06-05 00:06:58]  workdir=None
[2025-06-05 00:06:58] ]
[2025-06-05 00:06:58] 2025-06-05 04:06:36,801 | INFO     | transferring file log.44871837._075869.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6667820709/log.44871837._075869.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 00:06:58] 2025-06-05 04:06:36,801 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6667820709/log.44871837._075869.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._075869.job
[2025-06-05 00:06:58] 2025-06-05 04:06:36,813 | INFO     | adding to output.list: log.44871837._075869.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/04/log.44871837._075869.job.log.tg
[2025-06-05 00:06:58] 2025-06-05 04:06:36,813 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 00:06:58] 2025-06-05 04:06:36,814 | INFO     | summary of transferred files:
[2025-06-05 00:06:58] 2025-06-05 04:06:36,814 | INFO     |  -- lfn=log.44871837._075869.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 00:06:58] 2025-06-05 04:06:36,814 | INFO     | stage-out finished correctly
[2025-06-05 00:06:58] 2025-06-05 04:06:38,104 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 00:06:58] 2025-06-05 04:06:38,335 | INFO     | monitor loop #309: job 0:6667820709 is in state 'finished'
[2025-06-05 00:06:58] 2025-06-05 04:06:38,335 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:06:58] 2025-06-05 04:06:40,838 | INFO     | monitor loop #310: job 0:6667820709 is in state 'finished'
[2025-06-05 00:06:58] 2025-06-05 04:06:40,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:06:58] 2025-06-05 04:06:40,865 | INFO     | job 6667820709 has state=finished
[2025-06-05 00:06:58] 2025-06-05 04:06:40,866 | INFO     | preparing for final server update for job 6667820709 in state='finished'
[2025-06-05 00:06:58] 2025-06-05 04:06:40,866 | INFO     | this job has now completed (state=finished)
[2025-06-05 00:06:58] 2025-06-05 04:06:40,866 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 00:06:58] 2025-06-05 04:06:40,866 | INFO     | log transfer has been attempted: DONE
[2025-06-05 00:06:58] 2025-06-05 04:06:40,866 | INFO     | job 6667820709 has finished - writing final server update
[2025-06-05 00:06:58] 2025-06-05 04:06:40,867 | INFO     | total number of processed events: 400 (read)
[2025-06-05 00:06:58] 2025-06-05 04:06:40,883 | INFO     | executing command: lscpu
[2025-06-05 00:06:58] 2025-06-05 04:06:40,953 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 00:06:58] 2025-06-05 04:06:43,321 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 00:06:58] 2025-06-05 04:06:43,322 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667820709/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:06:58] 2025-06-05 04:06:43,322 | INFO     | extracted standard info from prmon json
[2025-06-05 00:06:58] 2025-06-05 04:06:43,323 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:06:58] 2025-06-05 04:06:43,323 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:06:58] 2025-06-05 04:06:43,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:06:58] 2025-06-05 04:06:43,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:06:58] 2025-06-05 04:06:43,325 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:06:58] 2025-06-05 04:06:43,325 | INFO     | sum of square deviations: 70364110.0
[2025-06-05 00:06:58] 2025-06-05 04:06:43,325 | INFO     | sum of deviations: -3627130638.0000024
[2025-06-05 00:06:58] 2025-06-05 04:06:43,325 | INFO     | mean x: 1749094407.0
[2025-06-05 00:06:58] 2025-06-05 04:06:43,325 | INFO     | mean y: 2283070.868852459
[2025-06-05 00:06:58] 2025-06-05 04:06:43,325 | INFO     | -- intersect: 90164638743.15897
[2025-06-05 00:06:58] 2025-06-05 04:06:43,326 | INFO     | intersect: 90164638743.15897
[2025-06-05 00:06:58] 2025-06-05 04:06:43,326 | INFO     | chi2: 0.037067274852970324
[2025-06-05 00:06:58] 2025-06-05 04:06:43,326 | INFO     | -- intersect: 90164638743.15897
[2025-06-05 00:06:58] 2025-06-05 04:06:43,326 | INFO     | current memory leak: -51.55 B/s (using 61 data points, chi2=0.04)
[2025-06-05 00:06:58] 2025-06-05 04:06:43,326 | INFO     | ..............................
[2025-06-05 00:06:58] 2025-06-05 04:06:43,326 | INFO     | . Timing measurements:
[2025-06-05 00:06:58] 2025-06-05 04:06:43,326 | INFO     | . get job = 0 s
[2025-06-05 00:06:58] 2025-06-05 04:06:43,326 | INFO     | . initial setup = 2 s
[2025-06-05 00:06:58] 2025-06-05 04:06:43,327 | INFO     | . payload setup = 3 s
[2025-06-05 00:06:58] 2025-06-05 04:06:43,327 | INFO     | . stage-in = 0 s
[2025-06-05 00:06:58] 2025-06-05 04:06:43,327 | INFO     | . payload execution = 4122 s
[2025-06-05 00:06:58] 2025-06-05 04:06:43,327 | INFO     | . stage-out = 0 s
[2025-06-05 00:06:58] 2025-06-05 04:06:43,327 | INFO     | . log creation = 0 s
[2025-06-05 00:06:58] 2025-06-05 04:06:43,327 | INFO     | ..............................
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | 
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | job summary report
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | --------------------------------------------------
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | PanDA job id: 6667820709
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | task id: 44871837
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | errors: (none)
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | pilot state: finished 
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | transexitcode: 0
[2025-06-05 00:06:58] 2025-06-05 04:06:43,560 | INFO     | exeerrorcode: 0
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | exeerrordiag: 
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | exitcode: 0
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | exitmsg: OK
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | cpuconsumptiontime: 31354 s
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | nevents: 400
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | neventsw: 0
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | pid: 1259199
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | pgrp: 1259199
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | corecount: 8
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | event service: False
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | sizes: {0: 2397392, 2: 2397598, 11: 2397626, 4128: 2423458, 4130: 2432399, 4131: 2432455, 4137: 2432753}
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | --------------------------------------------------
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | 
[2025-06-05 00:06:58] 2025-06-05 04:06:43,561 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 00:06:58] 2025-06-05 04:06:43,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | job 6667820709 has completed (purged errors)
[2025-06-05 00:06:58] 2025-06-05 04:06:43,573 | INFO     | overall cleanup function is called
[2025-06-05 00:06:58] 2025-06-05 04:06:44,300 | INFO     | PID=1252191 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:06:58] 2025-06-05 04:06:44,300 | INFO     | .. there are 14 such processes running
[2025-06-05 00:06:58] 2025-06-05 04:06:44,580 | INFO     | --- collectZombieJob: --- 10, [1259199]
[2025-06-05 00:06:58] 2025-06-05 04:06:44,580 | INFO     | zombie collector waiting for pid 1259199
[2025-06-05 00:06:58] 2025-06-05 04:06:44,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:06:58] 2025-06-05 04:06:44,580 | INFO     | collected zombie processes
[2025-06-05 00:06:58] 2025-06-05 04:06:44,580 | INFO     | will attempt to kill all subprocesses of pid=1259199
[2025-06-05 00:06:58] 2025-06-05 04:06:44,747 | INFO     | process IDs to be killed: [1259199] (in reverse order)
[2025-06-05 00:06:58] 2025-06-05 04:06:44,801 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:06:58] 2025-06-05 04:06:44,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:06:58] 2025-06-05 04:06:44,809 | INFO     | did not find any defunct processes belonging to 1259199
[2025-06-05 00:06:58] 2025-06-05 04:06:44,817 | INFO     | did not find any defunct processes belonging to 1259199
[2025-06-05 00:06:58] 2025-06-05 04:06:44,817 | INFO     | ready for new job
[2025-06-05 00:06:58] 2025-06-05 04:06:44,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:06:58] 2025-06-05 04:06:44,818 | INFO     | **************************************
[2025-06-05 00:06:58] 2025-06-05 04:06:44,818 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:06:58] 2025-06-05 04:06:44,818 | INFO     | **************************************
[2025-06-05 00:06:58] 2025-06-05 04:06:44,818 | INFO     | 
[2025-06-05 00:06:58] 2025-06-05 04:06:44,832 | INFO     | architecture information:
[2025-06-05 00:06:58] 2025-06-05 04:06:44,832 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:06:58] 2025-06-05 04:06:44,841 | INFO     | cat /etc/os-release:
[2025-06-05 00:06:58] NAME="CentOS Linux"
[2025-06-05 00:06:58] VERSION="7 (Core)"
[2025-06-05 00:06:58] ID="centos"
[2025-06-05 00:06:58] ID_LIKE="rhel fedora"
[2025-06-05 00:06:58] VERSION_ID="7"
[2025-06-05 00:06:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:06:58] ANSI_COLOR="0;31"
[2025-06-05 00:06:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:06:58] HOME_URL="https://www.centos.org/"
[2025-06-05 00:06:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:06:58] 
[2025-06-05 00:06:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:06:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:06:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:06:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:06:58] 
[2025-06-05 00:06:58] 2025-06-05 04:06:44,841 | INFO     | **************************************
[2025-06-05 00:06:58] 2025-06-05 04:06:45,344 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 00:06:58] 2025-06-05 04:06:45,356 | INFO     | sufficient remaining disk space (75890688000 B)
[2025-06-05 00:06:58] 2025-06-05 04:06:45,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:06:58] 2025-06-05 04:06:45,356 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:06:58] 2025-06-05 04:06:45,356 | INFO     | update_server=False
[2025-06-05 00:06:58] 2025-06-05 04:06:45,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:06:58] 2025-06-05 04:06:45,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:06:58] 2025-06-05 04:06:45,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:06:58] 2025-06-05 04:06:45,573 | INFO     | all payload control threads have been joined
[2025-06-05 00:06:58] 2025-06-05 04:06:45,626 | INFO     | all job control threads have been joined
[2025-06-05 00:06:58] 2025-06-05 04:06:45,851 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 00:06:58] 2025-06-05 04:06:45,851 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 00:06:58] 2025-06-05 04:06:45,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:06:58] 2025-06-05 04:06:45,852 | INFO     | will abort loop
[2025-06-05 00:06:58] 2025-06-05 04:06:46,299 | INFO     | all data control threads have been joined
[2025-06-05 00:06:58] 2025-06-05 04:06:46,305 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:06:58] 2025-06-05 04:06:46,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:06:58] 2025-06-05 04:06:46,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:06:58] 2025-06-05 04:06:46,362 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:46,362 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:46,472 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:46,511 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:46,579 | INFO     | [payload] control thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:46,631 | INFO     | [job] control thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:46,856 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:46,910 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:47,293 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:47,304 | INFO     | [data] control thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:47,358 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:47,390 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:47,589 | INFO     | [job] validate thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:47,780 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:47,787 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:48,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:06:58] 2025-06-05 04:06:52,698 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:06:58] 2025-06-05 04:06:53,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964560889664)>', '<ExcThread(monitor, started 139964209665792)>']
[2025-06-05 00:06:58] 2025-06-05 04:06:53,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:06:58] 2025-06-05 04:06:53,341 | INFO     | [monitor] control thread has ended
[2025-06-05 00:06:58] 2025-06-05 04:06:58,034 | INFO     | all workflow threads have been joined
[2025-06-05 00:06:58] 2025-06-05 04:06:58,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:06:58] 2025-06-05 04:06:58,035 | INFO     | traces error code: 0
[2025-06-05 00:06:58] 2025-06-05 04:06:58,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:06:58] 2025-06-05 04:06:58,173 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:06:58] 2025-06-05 04:06:58,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:06:58] 2025-06-05 04:06:58,176 [wrapper] pilotpid: 1252191
[2025-06-05 00:06:58] 2025-06-05 04:06:58,178 [wrapper] Pilot exit status: 0
[2025-06-05 00:06:58] 2025-06-05 04:06:58,184 [wrapper] pandaids: 6667820709
[2025-06-05 00:06:58] 2025-06-05 04:06:58,225 [wrapper] cleanup supervisor_pilot 1468637 1252192
[2025-06-05 00:06:58] 2025-06-05 04:06:58,227 [wrapper] Test setup, not cleaning
[2025-06-05 00:06:58] 2025-06-05 04:06:58,228 [wrapper] apfmon messages muted
[2025-06-05 00:06:58] 2025-06-05 04:06:58,230 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:06:58] 2025-06-05 04:06:58,231 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:06:58]  *** Error codes and diagnostics ***
[2025-06-05 00:06:58]     "exeErrorCode": 0,
[2025-06-05 00:06:58]     "exeErrorDiag": "",
[2025-06-05 00:06:58]     "pilotErrorCode": 0,
[2025-06-05 00:06:58]     "pilotErrorDiag": "",
[2025-06-05 00:06:58]  *** Listing of results directory ***
[2025-06-05 00:06:58] total 419128
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas    495897 May 27 19:30 pilot3.tar.gz
[2025-06-05 00:06:58] -rwx------. 1 boincer umatlas     37140 May 27 20:30 runpilot2-wrapper.sh
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas      5111 May 27 20:30 queuedata.json
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas       100 Jun  4 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:06:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 22:57 run_atlas
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas       105 Jun  4 22:57 job.xml
[2025-06-05 00:06:58] -rw-r--r--. 2 boincer umatlas 222850655 Jun  4 22:57 EVNT.44871834._002970.pool.root.1
[2025-06-05 00:06:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:57 start_atlas.sh
[2025-06-05 00:06:58] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 22:57 shared
[2025-06-05 00:06:58] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 22:57 input.tar.gz
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas         0 Jun  4 22:57 boinc_lockfile
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 22:57 pandaJob.out
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas    987109 Jun  4 22:57 agis_schedconf.cvmfs.json
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas   1598969 Jun  4 22:57 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:06:58] drwx------. 4 boincer umatlas      4096 Jun  4 22:57 pilot3
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas      6856 Jun  5 00:04 init_data.xml
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas        95 Jun  5 00:05 pilot_heartbeat.json
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas 201091021 Jun  5 00:06 HITS.44871837._075869.pool.root.1
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas       529 Jun  5 00:06 boinc_task_state.xml
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas      1042 Jun  5 00:06 memory_monitor_summary.json
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas    289085 Jun  5 00:06 log.44871837._075869.job.log.tgz.1
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 00:06 boinc_mmap_file
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas        27 Jun  5 00:06 wrapper_checkpoint.txt
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas      7727 Jun  5 00:06 heartbeat.json
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas      4539 Jun  5 00:06 pilotlog.txt
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas    413698 Jun  5 00:06 log.44871837._075869.job.log.1
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas       357 Jun  5 00:06 output.list
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas       620 Jun  5 00:06 runtime_log
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas    727040 Jun  5 00:06 result.tar.gz
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 00:06 runtime_log.err
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas       651 Jun  5 00:06 g7TNDmVrJe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfnaKDmyvdP7m.diag
[2025-06-05 00:06:58] -rw-r--r--. 1 boincer umatlas     21416 Jun  5 00:06 stderr.txt
[2025-06-05 00:06:58] HITS file was successfully produced:
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas 201091021 Jun  5 00:06 shared/HITS.pool.root.1
[2025-06-05 00:06:58]  *** Contents of shared directory: ***
[2025-06-05 00:06:58] total 415244
[2025-06-05 00:06:58] -rw-r--r--. 2 boincer umatlas 222850655 Jun  4 22:57 ATLAS.root_0
[2025-06-05 00:06:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:57 start_atlas.sh
[2025-06-05 00:06:58] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 22:57 input.tar.gz
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas 201091021 Jun  5 00:06 HITS.pool.root.1
[2025-06-05 00:06:58] -rw-------. 1 boincer umatlas    727040 Jun  5 00:06 result.tar.gz
00:07:00 (1242078): run_atlas exited; CPU time 31491.030211
00:07:00 (1242078): called boinc_finish(0)

</stderr_txt>
]]>

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