Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:57:05 (1232096): wrapper (7.7.26015): starting
22:57:05 (1232096): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:57:05] Arguments: --nthreads 8
[2025-06-04 22:57:05] Threads: 8
[2025-06-04 22:57:05] Checking for CVMFS
[2025-06-04 22:57:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:57:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:57:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:57:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:57:05] 2.12.6.0 6829 2206 179184 146802 0 245 28365521 32935936 7323 16776704 0 21605555 99.901 4316850 36066 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:57:05] CVMFS is ok
[2025-06-04 22:57:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:57:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:57:05] Further information can be found at the LHC@home message board.
[2025-06-04 22:57:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:57:05] Checking for apptainer binary...
[2025-06-04 22:57:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:57:05] Running /usr/bin/apptainer --version
[2025-06-04 22:57:05] apptainer version 1.4.1-1.el9
[2025-06-04 22:57:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:57:05] c6-8-25-3.aglt2.org
[2025-06-04 22:57:05] apptainer works
[2025-06-04 22:57:05] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:57:05] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:57:05] Starting ATLAS job with PandaID=6665897102
[2025-06-04 22:57:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:08:04]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:08:04]  is_altstaged=None
[2025-06-05 00:08:04]  is_tar=False
[2025-06-05 00:08:04]  lfn=log.44871837._049564.job.log.tgz.1
[2025-06-05 00:08:04]  mtime=0
[2025-06-05 00:08:04]  protocol_id=None
[2025-06-05 00:08:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 00:08:04]  replicas=None
[2025-06-05 00:08:04]  scope=mc23_13p6TeV
[2025-06-05 00:08:04]  status=None
[2025-06-05 00:08:04]  status_code=0
[2025-06-05 00:08:04]  storage_token=
[2025-06-05 00:08:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665897102/log.44871837._049564.job.log.tgz.1
[2025-06-05 00:08:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/3a/log.44871837._049564.job.log.tgz.1
[2025-06-05 00:08:04]  workdir=None
[2025-06-05 00:08:04] ]
[2025-06-05 00:08:04] 2025-06-05 04:07:39,867 | INFO     | transferring file log.44871837._049564.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665897102/log.44871837._049564.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 00:08:04] 2025-06-05 04:07:39,868 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665897102/log.44871837._049564.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._049564.job
[2025-06-05 00:08:04] 2025-06-05 04:07:39,881 | INFO     | adding to output.list: log.44871837._049564.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/3a/log.44871837._049564.job.log.tg
[2025-06-05 00:08:04] 2025-06-05 04:07:39,882 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 00:08:04] 2025-06-05 04:07:39,882 | INFO     | summary of transferred files:
[2025-06-05 00:08:04] 2025-06-05 04:07:39,882 | INFO     |  -- lfn=log.44871837._049564.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 00:08:04] 2025-06-05 04:07:39,882 | INFO     | stage-out finished correctly
[2025-06-05 00:08:04] 2025-06-05 04:07:40,226 | INFO     | monitor loop #317: job 0:6665897102 is in state 'finished'
[2025-06-05 00:08:04] 2025-06-05 04:07:40,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:08:04] 2025-06-05 04:07:41,458 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 00:08:04] 2025-06-05 04:07:42,730 | INFO     | monitor loop #318: job 0:6665897102 is in state 'finished'
[2025-06-05 00:08:04] 2025-06-05 04:07:42,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:08:04] 2025-06-05 04:07:42,969 | INFO     | job 6665897102 has state=finished
[2025-06-05 00:08:04] 2025-06-05 04:07:42,969 | INFO     | preparing for final server update for job 6665897102 in state='finished'
[2025-06-05 00:08:04] 2025-06-05 04:07:42,970 | INFO     | this job has now completed (state=finished)
[2025-06-05 00:08:04] 2025-06-05 04:07:42,970 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 00:08:04] 2025-06-05 04:07:42,970 | INFO     | log transfer has been attempted: DONE
[2025-06-05 00:08:04] 2025-06-05 04:07:42,970 | INFO     | job 6665897102 has finished - writing final server update
[2025-06-05 00:08:04] 2025-06-05 04:07:42,970 | INFO     | total number of processed events: 400 (read)
[2025-06-05 00:08:04] 2025-06-05 04:07:42,987 | INFO     | executing command: lscpu
[2025-06-05 00:08:04] 2025-06-05 04:07:43,047 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 00:08:04] 2025-06-05 04:07:45,232 | INFO     | monitor loop #319: job 0:6665897102 is in state 'finished'
[2025-06-05 00:08:04] 2025-06-05 04:07:45,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:08:04] 2025-06-05 04:07:45,404 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 00:08:04] 2025-06-05 04:07:45,404 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665897102/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:08:04] 2025-06-05 04:07:45,405 | INFO     | extracted standard info from prmon json
[2025-06-05 00:08:04] 2025-06-05 04:07:45,405 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:08:04] 2025-06-05 04:07:45,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:08:04] 2025-06-05 04:07:45,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:08:04] 2025-06-05 04:07:45,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:08:04] 2025-06-05 04:07:45,407 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:08:04] 2025-06-05 04:07:45,408 | INFO     | sum of square deviations: 73882315.5
[2025-06-05 00:08:04] 2025-06-05 04:07:45,408 | INFO     | sum of deviations: -4144114757.5
[2025-06-05 00:08:04] 2025-06-05 04:07:45,408 | INFO     | mean x: 1749094415.5
[2025-06-05 00:08:04] 2025-06-05 04:07:45,408 | INFO     | mean y: 2251400.3387096776
[2025-06-05 00:08:04] 2025-06-05 04:07:45,408 | INFO     | -- intersect: 98110275363.58858
[2025-06-05 00:08:04] 2025-06-05 04:07:45,408 | INFO     | intersect: 98110275363.58858
[2025-06-05 00:08:04] 2025-06-05 04:07:45,408 | INFO     | chi2: 0.046624038127709495
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | -- intersect: 98110275363.58858
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | current memory leak: -56.09 B/s (using 62 data points, chi2=0.05)
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | ..............................
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | . Timing measurements:
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | . get job = 0 s
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | . initial setup = 2 s
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | . payload setup = 3 s
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | . stage-in = 0 s
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | . payload execution = 4207 s
[2025-06-05 00:08:04] 2025-06-05 04:07:45,409 | INFO     | . stage-out = 0 s
[2025-06-05 00:08:04] 2025-06-05 04:07:45,410 | INFO     | . log creation = 0 s
[2025-06-05 00:08:04] 2025-06-05 04:07:45,410 | INFO     | ..............................
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | 
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | job summary report
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | --------------------------------------------------
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | PanDA job id: 6665897102
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | task id: 44871837
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | errors: (none)
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | pilot state: finished 
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | transexitcode: 0
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | exeerrorcode: 0
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | exeerrordiag: 
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | exitcode: 0
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | exitmsg: OK
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | cpuconsumptiontime: 31675 s
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | nevents: 400
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | neventsw: 0
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | pid: 1242317
[2025-06-05 00:08:04] 2025-06-05 04:07:45,493 | INFO     | pgrp: 1242317
[2025-06-05 00:08:04] 2025-06-05 04:07:45,494 | INFO     | corecount: 8
[2025-06-05 00:08:04] 2025-06-05 04:07:45,494 | INFO     | event service: False
[2025-06-05 00:08:04] 2025-06-05 04:07:45,494 | INFO     | sizes: {0: 2397165, 1: 2397420, 3: 2397626, 11: 2397654, 4214: 2423515, 4215: 2423514, 4216: 2432639, 4218: 2432695, 4222: 2432865}
[2025-06-05 00:08:04] 2025-06-05 04:07:45,494 | INFO     | --------------------------------------------------
[2025-06-05 00:08:04] 2025-06-05 04:07:45,494 | INFO     | 
[2025-06-05 00:08:04] 2025-06-05 04:07:45,494 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:08:04] 2025-06-05 04:07:45,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:08:04] 2025-06-05 04:07:45,506 | INFO     | job 6665897102 has completed (purged errors)
[2025-06-05 00:08:04] 2025-06-05 04:07:45,506 | INFO     | overall cleanup function is called
[2025-06-05 00:08:04] 2025-06-05 04:07:46,512 | INFO     | --- collectZombieJob: --- 10, [1242317]
[2025-06-05 00:08:04] 2025-06-05 04:07:46,513 | INFO     | zombie collector waiting for pid 1242317
[2025-06-05 00:08:04] 2025-06-05 04:07:46,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:08:04] 2025-06-05 04:07:46,513 | INFO     | collected zombie processes
[2025-06-05 00:08:04] 2025-06-05 04:07:46,513 | INFO     | will attempt to kill all subprocesses of pid=1242317
[2025-06-05 00:08:04] 2025-06-05 04:07:46,684 | INFO     | process IDs to be killed: [1242317] (in reverse order)
[2025-06-05 00:08:04] 2025-06-05 04:07:46,739 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:08:04] 2025-06-05 04:07:46,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:08:04] 2025-06-05 04:07:46,747 | INFO     | did not find any defunct processes belonging to 1242317
[2025-06-05 00:08:04] 2025-06-05 04:07:46,754 | INFO     | did not find any defunct processes belonging to 1242317
[2025-06-05 00:08:04] 2025-06-05 04:07:46,754 | INFO     | ready for new job
[2025-06-05 00:08:04] 2025-06-05 04:07:46,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:08:04] 2025-06-05 04:07:46,756 | INFO     | **************************************
[2025-06-05 00:08:04] 2025-06-05 04:07:46,756 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:08:04] 2025-06-05 04:07:46,756 | INFO     | **************************************
[2025-06-05 00:08:04] 2025-06-05 04:07:46,756 | INFO     | 
[2025-06-05 00:08:04] 2025-06-05 04:07:46,770 | INFO     | architecture information:
[2025-06-05 00:08:04] 2025-06-05 04:07:46,770 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:08:04] 2025-06-05 04:07:46,780 | INFO     | cat /etc/os-release:
[2025-06-05 00:08:04] NAME="CentOS Linux"
[2025-06-05 00:08:04] VERSION="7 (Core)"
[2025-06-05 00:08:04] ID="centos"
[2025-06-05 00:08:04] ID_LIKE="rhel fedora"
[2025-06-05 00:08:04] VERSION_ID="7"
[2025-06-05 00:08:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:08:04] ANSI_COLOR="0;31"
[2025-06-05 00:08:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:08:04] HOME_URL="https://www.centos.org/"
[2025-06-05 00:08:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:08:04] 
[2025-06-05 00:08:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:08:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:08:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:08:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:08:04] 
[2025-06-05 00:08:04] 2025-06-05 04:07:46,780 | INFO     | **************************************
[2025-06-05 00:08:04] 2025-06-05 04:07:47,283 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 00:08:04] 2025-06-05 04:07:47,295 | INFO     | sufficient remaining disk space (76123471872 B)
[2025-06-05 00:08:04] 2025-06-05 04:07:47,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:08:04] 2025-06-05 04:07:47,296 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:08:04] 2025-06-05 04:07:47,296 | INFO     | update_server=False
[2025-06-05 00:08:04] 2025-06-05 04:07:47,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:08:04] 2025-06-05 04:07:47,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:08:04] 2025-06-05 04:07:47,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:08:04] 2025-06-05 04:07:47,681 | INFO     | all payload control threads have been joined
[2025-06-05 00:08:04] 2025-06-05 04:07:47,735 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 00:08:04] 2025-06-05 04:07:47,736 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 00:08:04] 2025-06-05 04:07:47,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:08:04] 2025-06-05 04:07:47,736 | INFO     | will abort loop
[2025-06-05 00:08:04] 2025-06-05 04:07:47,803 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:08:04] 2025-06-05 04:07:47,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:08:04] 2025-06-05 04:07:47,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:08:04] 2025-06-05 04:07:47,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:08:04] 2025-06-05 04:07:48,094 | INFO     | all data control threads have been joined
[2025-06-05 00:08:04] 2025-06-05 04:07:48,300 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:48,301 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:48,566 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:48,687 | INFO     | [payload] control thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:48,740 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:48,771 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:48,899 | INFO     | all job control threads have been joined
[2025-06-05 00:08:04] 2025-06-05 04:07:49,099 | INFO     | [data] control thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:49,156 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:49,566 | INFO     | [job] validate thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:49,624 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:49,637 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:49,643 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:49,905 | INFO     | [job] control thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:50,005 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:51,552 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:58,284 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:08:04] 2025-06-05 04:07:59,290 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:08:04] 2025-06-05 04:07:59,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604988155712)>', '<ExcThread(monitor, started 140604629554944)>']
[2025-06-05 00:08:04] 2025-06-05 04:07:59,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:08:04] 2025-06-05 04:07:59,863 | INFO     | [monitor] control thread has ended
[2025-06-05 00:08:04] 2025-06-05 04:08:04,354 | INFO     | all workflow threads have been joined
[2025-06-05 00:08:04] 2025-06-05 04:08:04,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:08:04] 2025-06-05 04:08:04,355 | INFO     | traces error code: 0
[2025-06-05 00:08:04] 2025-06-05 04:08:04,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:08:04] 2025-06-05 04:08:04,455 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:08:04] 2025-06-05 04:08:04,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:08:04] 2025-06-05 04:08:04,458 [wrapper] pilotpid: 1235710
[2025-06-05 00:08:04] 2025-06-05 04:08:04,460 [wrapper] Pilot exit status: 0
[2025-06-05 00:08:04] 2025-06-05 04:08:04,466 [wrapper] pandaids: 6665897102
[2025-06-05 00:08:04] 2025-06-05 04:08:04,505 [wrapper] cleanup supervisor_pilot 1466560 1235711
[2025-06-05 00:08:04] 2025-06-05 04:08:04,507 [wrapper] Test setup, not cleaning
[2025-06-05 00:08:04] 2025-06-05 04:08:04,508 [wrapper] apfmon messages muted
[2025-06-05 00:08:04] 2025-06-05 04:08:04,510 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:08:04] 2025-06-05 04:08:04,511 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:08:04]  *** Error codes and diagnostics ***
[2025-06-05 00:08:04]     "exeErrorCode": 0,
[2025-06-05 00:08:04]     "exeErrorDiag": "",
[2025-06-05 00:08:04]     "pilotErrorCode": 0,
[2025-06-05 00:08:04]     "pilotErrorDiag": "",
[2025-06-05 00:08:04]  *** Listing of results directory ***
[2025-06-05 00:08:04] total 421280
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas    495897 May 26 07:13 pilot3.tar.gz
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas      5111 May 26 07:14 queuedata.json
[2025-06-05 00:08:04] -rwx------. 1 boincer umatlas     37140 May 26 07:14 runpilot2-wrapper.sh
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas       100 Jun  4 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:08:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 22:57 run_atlas
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas       105 Jun  4 22:57 job.xml
[2025-06-05 00:08:04] -rw-r--r--. 2 boincer umatlas 225818982 Jun  4 22:57 EVNT.44871834._001975.pool.root.1
[2025-06-05 00:08:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:57 start_atlas.sh
[2025-06-05 00:08:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 22:57 shared
[2025-06-05 00:08:04] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 22:57 input.tar.gz
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas         0 Jun  4 22:57 boinc_lockfile
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 22:57 pandaJob.out
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas    987109 Jun  4 22:57 agis_schedconf.cvmfs.json
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas   1598969 Jun  4 22:57 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:08:04] drwx------. 4 boincer umatlas      4096 Jun  4 22:57 pilot3
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas      6856 Jun  5 00:04 init_data.xml
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas 200265965 Jun  5 00:07 HITS.44871837._049564.pool.root.1
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas       529 Jun  5 00:07 boinc_task_state.xml
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas        95 Jun  5 00:07 pilot_heartbeat.json
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas      1042 Jun  5 00:07 memory_monitor_summary.json
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas    315451 Jun  5 00:07 log.44871837._049564.job.log.tgz.1
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas      7725 Jun  5 00:07 heartbeat.json
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas        27 Jun  5 00:07 wrapper_checkpoint.txt
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 00:07 boinc_mmap_file
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas      4611 Jun  5 00:08 pilotlog.txt
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas    421592 Jun  5 00:08 log.44871837._049564.job.log.1
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas       357 Jun  5 00:08 output.list
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas       620 Jun  5 00:08 runtime_log
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas    757760 Jun  5 00:08 result.tar.gz
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas       653 Jun  5 00:08 XXjMDmlxkd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJZWKDmhMxUKo.diag
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 00:08 runtime_log.err
[2025-06-05 00:08:04] -rw-r--r--. 1 boincer umatlas     21392 Jun  5 00:08 stderr.txt
[2025-06-05 00:08:04] HITS file was successfully produced:
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas 200265965 Jun  5 00:07 shared/HITS.pool.root.1
[2025-06-05 00:08:04]  *** Contents of shared directory: ***
[2025-06-05 00:08:04] total 417364
[2025-06-05 00:08:04] -rw-r--r--. 2 boincer umatlas 225818982 Jun  4 22:57 ATLAS.root_0
[2025-06-05 00:08:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:57 start_atlas.sh
[2025-06-05 00:08:04] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 22:57 input.tar.gz
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas 200265965 Jun  5 00:07 HITS.pool.root.1
[2025-06-05 00:08:04] -rw-------. 1 boincer umatlas    757760 Jun  5 00:08 result.tar.gz
00:08:05 (1232096): run_atlas exited; CPU time 31808.810385
00:08:05 (1232096): called boinc_finish(0)

</stderr_txt>
]]>

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