Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:53:43 (16813): wrapper (7.7.26015): starting
09:53:43 (16813): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 09:53:43] Arguments: --nthreads 8
[2025-06-05 09:53:43] Threads: 8
[2025-06-05 09:53:43] Checking for CVMFS
[2025-06-05 09:53:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:53:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:53:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:53:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:53:46] 2.11.2.0 15360 34367 101252 146810 0 60 14290238 25165824 3135 130560 0 17994687 99.788 19434400 2154 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 09:53:46] CVMFS is ok
[2025-06-05 09:53:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:53:46] Checking for apptainer binary...
[2025-06-05 09:53:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:53:46] Running /usr/bin/apptainer --version
[2025-06-05 09:53:46] apptainer version 1.3.2-1.el7
[2025-06-05 09:53:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:24:20] cg-vwn250.simple-grid.lan
[2025-06-05 10:24:20] apptainer works
[2025-06-05 10:24:20] Set ATHENA_PROC_NUMBER=8
[2025-06-05 10:24:20] Set ATHENA_CORE_NUMBER=8
[2025-06-05 10:24:21] Starting ATLAS job with PandaID=6668532996
[2025-06-05 10:24:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:03:46]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:03:46] 2025-06-05 13:54:51,553 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6668532996/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:03:46] 2025-06-05 13:54:51,554 | INFO     | extracted standard info from prmon json
[2025-06-05 16:03:46] 2025-06-05 13:54:51,554 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:03:46] 2025-06-05 13:54:51,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:03:46] 2025-06-05 13:54:51,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:03:46] 2025-06-05 13:54:51,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:03:46] 2025-06-05 13:54:51,561 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:03:46] 2025-06-05 13:54:51,562 | INFO     | sum of square deviations: 9508390372.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,566 | INFO     | sum of deviations: 67864011702.00004
[2025-06-05 16:03:46] 2025-06-05 13:54:51,566 | INFO     | mean x: 1749122076.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,566 | INFO     | mean y: 2459973.1501597445
[2025-06-05 16:03:46] 2025-06-05 13:54:51,566 | INFO     | -- intersect: -12481508016.157652
[2025-06-05 16:03:46] 2025-06-05 13:54:51,566 | INFO     | intersect: -12481508016.157652
[2025-06-05 16:03:46] 2025-06-05 13:54:51,567 | INFO     | chi2: 7.499092889505609
[2025-06-05 16:03:46] 2025-06-05 13:54:51,568 | INFO     | sum of square deviations: 9059954057.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,571 | INFO     | sum of deviations: 109183894906.49998
[2025-06-05 16:03:46] 2025-06-05 13:54:51,571 | INFO     | mean x: 1749121923.5
[2025-06-05 16:03:46] 2025-06-05 13:54:51,571 | INFO     | mean y: 2473885.1915584416
[2025-06-05 16:03:46] 2025-06-05 13:54:51,571 | INFO     | -- intersect: -21076655553.276752
[2025-06-05 16:03:46] 2025-06-05 13:54:51,571 | INFO     | intersect: -21076655553.276752
[2025-06-05 16:03:46] 2025-06-05 13:54:51,572 | INFO     | chi2: 5.937951465119198
[2025-06-05 16:03:46] 2025-06-05 13:54:51,572 | INFO     | current chi2=5.937951465119198 (change=20.817736856828446 %)
[2025-06-05 16:03:46] 2025-06-05 13:54:51,572 | INFO     | right removable region: 307
[2025-06-05 16:03:46] 2025-06-05 13:54:51,573 | INFO     | sum of square deviations: 9059954057.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,576 | INFO     | sum of deviations: -40779983764.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,576 | INFO     | mean x: 1749122228.5
[2025-06-05 16:03:46] 2025-06-05 13:54:51,576 | INFO     | mean y: 2496893.6818181816
[2025-06-05 16:03:46] 2025-06-05 13:54:51,576 | INFO     | -- intersect: 7875514309.743699
[2025-06-05 16:03:46] 2025-06-05 13:54:51,576 | INFO     | intersect: 7875514309.743699
[2025-06-05 16:03:46] 2025-06-05 13:54:51,577 | INFO     | chi2: 2.8828489261967696
[2025-06-05 16:03:46] 2025-06-05 13:54:51,577 | INFO     | current chi2=2.8828489261967696 (change=61.5573647549947 %)
[2025-06-05 16:03:46] 2025-06-05 13:54:51,578 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,581 | INFO     | sum of deviations: -84265465880.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,581 | INFO     | mean x: 1749122381.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,582 | INFO     | mean y: 2512086.2772277226
[2025-06-05 16:03:46] 2025-06-05 13:54:51,582 | INFO     | -- intersect: 17089607480.958
[2025-06-05 16:03:46] 2025-06-05 13:54:51,582 | INFO     | intersect: 17089607480.958
[2025-06-05 16:03:46] 2025-06-05 13:54:51,582 | INFO     | chi2: 1.8909151337264034
[2025-06-05 16:03:46] 2025-06-05 13:54:51,582 | INFO     | current chi2=1.8909151337264034 (change=34.40810870998314 %)
[2025-06-05 16:03:46] 2025-06-05 13:54:51,583 | INFO     | sum of square deviations: 8205826414.5
[2025-06-05 16:03:46] 2025-06-05 13:54:51,586 | INFO     | sum of deviations: -86129661229.50003
[2025-06-05 16:03:46] 2025-06-05 13:54:51,586 | INFO     | mean x: 1749122533.5
[2025-06-05 16:03:46] 2025-06-05 13:54:51,586 | INFO     | mean y: 2512751.077181208
[2025-06-05 16:03:46] 2025-06-05 13:54:51,586 | INFO     | -- intersect: 18361581496.79587
[2025-06-05 16:03:46] 2025-06-05 13:54:51,586 | INFO     | intersect: 18361581496.79587
[2025-06-05 16:03:46] 2025-06-05 13:54:51,587 | INFO     | chi2: 1.8744210829175962
[2025-06-05 16:03:46] 2025-06-05 13:54:51,587 | INFO     | current chi2=1.8744210829175962 (change=0.8722787455988331 %)
[2025-06-05 16:03:46] 2025-06-05 13:54:51,587 | INFO     | left removable region: 30
[2025-06-05 16:03:46] 2025-06-05 13:54:51,588 | INFO     | sum of square deviations: 6590404498.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,590 | INFO     | sum of deviations: -16528238590.999998
[2025-06-05 16:03:46] 2025-06-05 13:54:51,591 | INFO     | mean x: 1749122808.0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,591 | INFO     | mean y: 2517041.2815884477
[2025-06-05 16:03:46] 2025-06-05 13:54:51,591 | INFO     | -- intersect: 4389185432.327573
[2025-06-05 16:03:46] 2025-06-05 13:54:51,591 | INFO     | intersect: 4389185432.327573
[2025-06-05 16:03:46] 2025-06-05 13:54:51,591 | INFO     | chi2: 0.1254910112756087
[2025-06-05 16:03:46] 2025-06-05 13:54:51,592 | INFO     | -- intersect: 4389185432.327573
[2025-06-05 16:03:46] 2025-06-05 13:54:51,592 | INFO     | current memory leak: -2.51 B/s (using 277 data points, chi2=0.13)
[2025-06-05 16:03:46] 2025-06-05 13:54:51,593 | INFO     | ..............................
[2025-06-05 16:03:46] 2025-06-05 13:54:51,593 | INFO     | . Timing measurements:
[2025-06-05 16:03:46] 2025-06-05 13:54:51,593 | INFO     | . get job = 0 s
[2025-06-05 16:03:46] 2025-06-05 13:54:51,593 | INFO     | . initial setup = 9 s
[2025-06-05 16:03:46] 2025-06-05 13:54:51,593 | INFO     | . payload setup = 170 s
[2025-06-05 16:03:46] 2025-06-05 13:54:51,593 | INFO     | . stage-in = 0 s
[2025-06-05 16:03:46] 2025-06-05 13:54:51,594 | INFO     | . payload execution = 19189 s
[2025-06-05 16:03:46] 2025-06-05 13:54:51,594 | INFO     | . stage-out = 3 s
[2025-06-05 16:03:46] 2025-06-05 13:54:51,594 | INFO     | . log creation = 1 s
[2025-06-05 16:03:46] 2025-06-05 13:54:51,594 | INFO     | ..............................
[2025-06-05 16:03:46] 2025-06-05 13:54:51,870 | INFO     | 
[2025-06-05 16:03:46] 2025-06-05 13:54:51,870 | INFO     | job summary report
[2025-06-05 16:03:46] 2025-06-05 13:54:51,870 | INFO     | --------------------------------------------------
[2025-06-05 16:03:46] 2025-06-05 13:54:51,870 | INFO     | PanDA job id: 6668532996
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | task id: 44871837
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | errors: (none)
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | pilot state: finished 
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | transexitcode: 0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | exeerrorcode: 0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | exeerrordiag: 
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | exitcode: 0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,871 | INFO     | exitmsg: OK
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | cpuconsumptiontime: 72814 s
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | nevents: 400
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | neventsw: 0
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | pid: 14413
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | pgrp: 14413
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | corecount: 8
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | event service: False
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | sizes: {0: 2397166, 1: 2397250, 2: 2397449, 12: 2397449, 23: 2397477, 34: 2397505, 45: 2397661, 55: 2397689, 66: 2397717, 77: 2397745, 86: 2398007, 88: 2398315, 19
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | --------------------------------------------------
[2025-06-05 16:03:46] 2025-06-05 13:54:51,872 | INFO     | 
[2025-06-05 16:03:46] 2025-06-05 13:54:51,873 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-05 16:03:46] 2025-06-05 13:54:52,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,177 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,179 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:03:46] 2025-06-05 13:54:52,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,179 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:03:46] 2025-06-05 13:54:52,179 | INFO     | job 6668532996 has completed (purged errors)
[2025-06-05 16:03:46] 2025-06-05 13:54:52,179 | INFO     | overall cleanup function is called
[2025-06-05 16:03:46] 2025-06-05 13:54:53,196 | INFO     | --- collectZombieJob: --- 10, [14413]
[2025-06-05 16:03:46] 2025-06-05 13:54:53,196 | INFO     | zombie collector waiting for pid 14413
[2025-06-05 16:03:46] 2025-06-05 13:54:53,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:03:46] 2025-06-05 13:54:53,197 | INFO     | collected zombie processes
[2025-06-05 16:03:46] 2025-06-05 13:54:53,197 | INFO     | will attempt to kill all subprocesses of pid=14413
[2025-06-05 16:03:46] 2025-06-05 13:54:53,323 | INFO     | process IDs to be killed: [14413] (in reverse order)
[2025-06-05 16:03:46] 2025-06-05 13:54:54,142 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:03:46] 2025-06-05 13:54:54,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:03:46] 2025-06-05 13:54:54,146 | INFO     | did not find any defunct processes belonging to 14413
[2025-06-05 16:03:46] 2025-06-05 13:54:54,150 | INFO     | did not find any defunct processes belonging to 14413
[2025-06-05 16:03:46] 2025-06-05 13:54:54,150 | INFO     | ready for new job
[2025-06-05 16:03:46] 2025-06-05 13:54:54,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:03:46] 2025-06-05 13:54:54,153 | INFO     | **************************************
[2025-06-05 16:03:46] 2025-06-05 13:54:54,153 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:03:46] 2025-06-05 13:54:54,153 | INFO     | **************************************
[2025-06-05 16:03:46] 2025-06-05 13:54:54,153 | INFO     | 
[2025-06-05 16:03:46] 2025-06-05 13:54:54,154 | INFO     | pilot is running in a VM
[2025-06-05 16:03:46] 2025-06-05 13:54:54,154 | INFO     | architecture information:
[2025-06-05 16:03:46] 2025-06-05 13:54:54,167 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:03:46] 2025-06-05 13:54:54,414 | INFO     | cat /etc/os-release:
[2025-06-05 16:03:46] NAME="CentOS Linux"
[2025-06-05 16:03:46] VERSION="7 (Core)"
[2025-06-05 16:03:46] ID="centos"
[2025-06-05 16:03:46] ID_LIKE="rhel fedora"
[2025-06-05 16:03:46] VERSION_ID="7"
[2025-06-05 16:03:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:03:46] ANSI_COLOR="0;31"
[2025-06-05 16:03:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:03:46] HOME_URL="https://www.centos.org/"
[2025-06-05 16:03:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:03:46] 
[2025-06-05 16:03:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:03:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:03:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:03:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:03:46] 
[2025-06-05 16:03:46] 2025-06-05 13:54:54,414 | INFO     | **************************************
[2025-06-05 16:03:46] 2025-06-05 13:54:54,918 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-05 16:03:46] 2025-06-05 13:54:55,172 | INFO     | sufficient remaining disk space (496656973824 B)
[2025-06-05 16:03:46] 2025-06-05 13:54:55,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:03:46] 2025-06-05 13:54:55,172 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:03:46] 2025-06-05 13:54:55,172 | INFO     | update_server=False
[2025-06-05 16:03:46] 2025-06-05 13:54:55,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:03:46] 2025-06-05 13:54:55,178 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:03:46] 2025-06-05 13:54:55,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:03:46] 2025-06-05 13:54:55,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:03:46] 2025-06-05 13:54:55,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:03:46] 2025-06-05 13:54:55,392 | INFO     | all job control threads have been joined
[2025-06-05 16:03:46] 2025-06-05 13:54:55,429 | INFO     | all payload control threads have been joined
[2025-06-05 16:03:46] 2025-06-05 13:54:55,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:03:46] 2025-06-05 13:54:55,532 | INFO     | aborting loop
[2025-06-05 16:03:46] 2025-06-05 13:54:56,178 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,199 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,227 | INFO     | all data control threads have been joined
[2025-06-05 16:03:46] 2025-06-05 13:54:56,398 | INFO     | [job] control thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,435 | INFO     | [payload] control thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:03:46] 2025-06-05 13:54:56,538 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,572 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,661 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,703 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:03:46] 2025-06-05 13:54:56,811 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,864 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:56,888 | INFO     | [job] validate thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:57,232 | INFO     | [data] control thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:57,369 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:57,434 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:54:57,742 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:55:00,453 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:03:46] 2025-06-05 13:55:02,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507563636544)>', '<ExcThread(monitor, started 140507254593280)>']
[2025-06-05 16:03:46] 2025-06-05 13:55:03,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:03:46] 2025-06-05 13:55:03,227 | INFO     | [monitor] control thread has ended
[2025-06-05 16:03:46] 2025-06-05 13:55:07,310 | INFO     | all workflow threads have been joined
[2025-06-05 16:03:46] 2025-06-05 13:55:07,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:03:46] 2025-06-05 13:55:07,311 | INFO     | traces error code: 0
[2025-06-05 16:03:46] 2025-06-05 13:55:07,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:03:46] 2025-06-05 13:55:07,666 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:03:46] 2025-06-05 13:55:07,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:03:46] 2025-06-05 13:55:07,688 [wrapper] pilotpid: 5783
[2025-06-05 16:03:46] 2025-06-05 13:55:07,753 [wrapper] Pilot exit status: 0
[2025-06-05 16:03:46] 2025-06-05 13:55:08,164 [wrapper] pandaids: 6668532996
[2025-06-05 16:03:46] 2025-06-05 13:55:08,578 [wrapper] cleanup supervisor_pilot 15434 5784
[2025-06-05 16:03:46] 2025-06-05 13:55:08,684 [wrapper] Test setup, not cleaning
[2025-06-05 16:03:46] 2025-06-05 13:55:08,814 [wrapper] apfmon messages muted
[2025-06-05 16:03:46] 2025-06-05 13:55:08,937 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:03:46] 2025-06-05 13:55:09,002 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:03:46]  *** Error codes and diagnostics ***
[2025-06-05 16:03:46]     "exeErrorCode": 0,
[2025-06-05 16:03:46]     "exeErrorDiag": "",
[2025-06-05 16:03:46]     "pilotErrorCode": 0,
[2025-06-05 16:03:46]     "pilotErrorDiag": "",
[2025-06-05 16:03:46]  *** Listing of results directory ***
[2025-06-05 16:03:46] total 424488
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc    495897 May 28 16:07 pilot3.tar.gz
[2025-06-05 16:03:46] -rwx------. 1 boinc boinc     37140 May 28 16:42 runpilot2-wrapper.sh
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc      5111 May 28 16:42 queuedata.json
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc       100 Jun  5 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:03:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 09:53 run_atlas
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc       105 Jun  5 09:53 job.xml
[2025-06-05 16:03:46] -rw-r--r--. 2 boinc boinc 224937091 Jun  5 09:53 EVNT.44871834._003349.pool.root.1
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc      6393 Jun  5 09:53 init_data.xml
[2025-06-05 16:03:46] -rw-r--r--. 2 boinc boinc     15093 Jun  5 09:53 start_atlas.sh
[2025-06-05 16:03:46] drwxrwx--x. 2 boinc boinc        68 Jun  5 09:53 shared
[2025-06-05 16:03:46] -rw-r--r--. 2 boinc boinc    508877 Jun  5 09:53 input.tar.gz
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc         0 Jun  5 09:53 boinc_lockfile
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc      2559 Jun  5 10:24 pandaJob.out
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc    983281 Jun  5 10:27 agis_schedconf.cvmfs.json
[2025-06-05 16:03:46] drwx------. 4 boinc boinc      4096 Jun  5 10:27 pilot3
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc 201706127 Jun  5 15:51 HITS.44871837._085888.pool.root.1
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc       531 Jun  5 15:52 boinc_task_state.xml
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc      1017 Jun  5 15:53 memory_monitor_summary.json
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc   1598969 Jun  5 15:53 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc    446342 Jun  5 15:53 log.44871837._085888.job.log.tgz.1
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc        95 Jun  5 15:54 pilot_heartbeat.json
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc      7690 Jun  5 15:54 heartbeat.json
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc      4417 Jun  5 15:55 pilotlog.txt
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc   1659589 Jun  5 15:55 log.44871837._085888.job.log.1
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc       357 Jun  5 15:55 output.list
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc       620 Jun  5 15:55 runtime_log
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc   2129920 Jun  5 15:55 result.tar.gz
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc      8673 Jun  5 15:55 runtime_log.err
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc       657 Jun  5 15:55 CUiLDmDAXe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYNcKDml4XN8m.diag
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc      8192 Jun  5 16:03 boinc_mmap_file
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc        28 Jun  5 16:03 wrapper_checkpoint.txt
[2025-06-05 16:03:46] -rw-r--r--. 1 boinc boinc     20528 Jun  5 16:03 stderr.txt
[2025-06-05 16:03:46] HITS file was successfully produced:
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc 201706127 Jun  5 15:51 shared/HITS.pool.root.1
[2025-06-05 16:03:46]  *** Contents of shared directory: ***
[2025-06-05 16:03:46] total 419244
[2025-06-05 16:03:46] -rw-r--r--. 2 boinc boinc 224937091 Jun  5 09:53 ATLAS.root_0
[2025-06-05 16:03:46] -rw-r--r--. 2 boinc boinc     15093 Jun  5 09:53 start_atlas.sh
[2025-06-05 16:03:46] -rw-r--r--. 2 boinc boinc    508877 Jun  5 09:53 input.tar.gz
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc 201706127 Jun  5 15:51 HITS.pool.root.1
[2025-06-05 16:03:46] -rw-------. 1 boinc boinc   2129920 Jun  5 15:55 result.tar.gz
16:03:48 (16813): run_atlas exited; CPU time 73080.992617
16:03:48 (16813): called boinc_finish(0)

</stderr_txt>
]]>

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