Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:51:22 (21921): wrapper (7.7.26015): starting
04:51:22 (21921): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:51:22] Arguments: --nthreads 8
[2025-06-05 04:51:22] Threads: 8
[2025-06-05 04:51:22] Checking for CVMFS
[2025-06-05 04:51:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:51:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:51:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:51:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:51:23] 2.11.2.0 15360 34065 101648 146802 1 201 14048599 25165825 2546 130560 0 17809466 99.786 19356492 2149 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 04:51:23] CVMFS is ok
[2025-06-05 04:51:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:51:23] Checking for apptainer binary...
[2025-06-05 04:51:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:51:23] Running /usr/bin/apptainer --version
[2025-06-05 04:51:23] apptainer version 1.3.2-1.el7
[2025-06-05 04:51:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:51:25] cg-vwn250.simple-grid.lan
[2025-06-05 04:51:25] apptainer works
[2025-06-05 04:51:25] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:51:25] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:51:25] Starting ATLAS job with PandaID=6668229934
[2025-06-05 04:51:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:53:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:53:38] 2025-06-05 07:51:27,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:53:38] 2025-06-05 07:51:27,732 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:53:38] 2025-06-05 07:51:27,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:53:38] 2025-06-05 07:51:27,738 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:53:38] 2025-06-05 07:51:27,739 | INFO     | sum of square deviations: 7720081493.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,748 | INFO     | sum of deviations: 2765690834.0000114
[2025-06-05 09:53:38] 2025-06-05 07:51:27,756 | INFO     | mean x: 1749100865.5
[2025-06-05 09:53:38] 2025-06-05 07:51:27,756 | INFO     | mean y: 2491856.4315068494
[2025-06-05 09:53:38] 2025-06-05 07:51:27,757 | INFO     | -- intersect: -624117103.0517706
[2025-06-05 09:53:38] 2025-06-05 07:51:27,757 | INFO     | intersect: -624117103.0517706
[2025-06-05 09:53:38] 2025-06-05 07:51:27,757 | INFO     | chi2: 2.53654309363621
[2025-06-05 09:53:38] 2025-06-05 07:51:27,758 | INFO     | sum of square deviations: 7330250928.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,760 | INFO     | sum of deviations: 21978600303.000008
[2025-06-05 09:53:38] 2025-06-05 07:51:27,760 | INFO     | mean x: 1749100713.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,761 | INFO     | mean y: 2499267.2195121953
[2025-06-05 09:53:38] 2025-06-05 07:51:27,761 | INFO     | -- intersect: -5241903119.317635
[2025-06-05 09:53:38] 2025-06-05 07:51:27,761 | INFO     | intersect: -5241903119.317635
[2025-06-05 09:53:38] 2025-06-05 07:51:27,761 | INFO     | chi2: 1.7663831427354786
[2025-06-05 09:53:38] 2025-06-05 07:51:27,761 | INFO     | current chi2=1.7663831427354786 (change=30.362580980111957 %)
[2025-06-05 09:53:38] 2025-06-05 07:51:27,762 | INFO     | sum of square deviations: 6953769450.5
[2025-06-05 09:53:38] 2025-06-05 07:51:27,764 | INFO     | sum of deviations: 21492616505.500004
[2025-06-05 09:53:38] 2025-06-05 07:51:27,765 | INFO     | mean x: 1749100560.5
[2025-06-05 09:53:38] 2025-06-05 07:51:27,765 | INFO     | mean y: 2499070.3368794327
[2025-06-05 09:53:38] 2025-06-05 07:51:27,765 | INFO     | -- intersect: -5403597269.782444
[2025-06-05 09:53:38] 2025-06-05 07:51:27,765 | INFO     | intersect: -5403597269.782444
[2025-06-05 09:53:38] 2025-06-05 07:51:27,765 | INFO     | chi2: 1.7669265133333805
[2025-06-05 09:53:38] 2025-06-05 07:51:27,765 | INFO     | current chi2=1.7669265133333805 (change=-0.030761763105392904 %)
[2025-06-05 09:53:38] 2025-06-05 07:51:27,765 | INFO     | right removable region: 281
[2025-06-05 09:53:38] 2025-06-05 07:51:27,766 | INFO     | sum of square deviations: 7330250928.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,769 | INFO     | sum of deviations: -47321786329.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,769 | INFO     | mean x: 1749101018.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,769 | INFO     | mean y: 2511321.637630662
[2025-06-05 09:53:38] 2025-06-05 07:51:27,769 | INFO     | -- intersect: 11294155421.49598
[2025-06-05 09:53:38] 2025-06-05 07:51:27,769 | INFO     | intersect: 11294155421.49598
[2025-06-05 09:53:38] 2025-06-05 07:51:27,770 | INFO     | chi2: 0.9512465293561317
[2025-06-05 09:53:38] 2025-06-05 07:51:27,770 | INFO     | current chi2=0.9512465293561317 (change=62.49830993438824 %)
[2025-06-05 09:53:38] 2025-06-05 07:51:27,770 | INFO     | sum of square deviations: 6953769450.5
[2025-06-05 09:53:38] 2025-06-05 07:51:27,773 | INFO     | sum of deviations: -46820038362.5
[2025-06-05 09:53:38] 2025-06-05 07:51:27,773 | INFO     | mean x: 1749101170.5
[2025-06-05 09:53:38] 2025-06-05 07:51:27,773 | INFO     | mean y: 2511097.8333333335
[2025-06-05 09:53:38] 2025-06-05 07:51:27,773 | INFO     | -- intersect: 11779286914.986038
[2025-06-05 09:53:38] 2025-06-05 07:51:27,773 | INFO     | intersect: 11779286914.986038
[2025-06-05 09:53:38] 2025-06-05 07:51:27,774 | INFO     | chi2: 0.9368671918713098
[2025-06-05 09:53:38] 2025-06-05 07:51:27,774 | INFO     | current chi2=0.9368671918713098 (change=1.511631006375898 %)
[2025-06-05 09:53:38] 2025-06-05 07:51:27,774 | INFO     | left removable region: 20
[2025-06-05 09:53:38] 2025-06-05 07:51:27,774 | INFO     | sum of square deviations: 5513070810.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,776 | INFO     | sum of deviations: -8665554226.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,777 | INFO     | mean x: 1749101140.0
[2025-06-05 09:53:38] 2025-06-05 07:51:27,777 | INFO     | mean y: 2510811.6590038314
[2025-06-05 09:53:38] 2025-06-05 07:51:27,777 | INFO     | -- intersect: 2751782732.479556
[2025-06-05 09:53:38] 2025-06-05 07:51:27,777 | INFO     | intersect: 2751782732.479556
[2025-06-05 09:53:38] 2025-06-05 07:51:27,777 | INFO     | chi2: 0.08690076691121724
[2025-06-05 09:53:38] 2025-06-05 07:51:27,778 | INFO     | -- intersect: 2751782732.479556
[2025-06-05 09:53:38] 2025-06-05 07:51:27,778 | INFO     | current memory leak: -1.57 B/s (using 261 data points, chi2=0.09)
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | ..............................
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | . Timing measurements:
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | . get job = 0 s
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | . initial setup = 2 s
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | . payload setup = 27 s
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | . stage-in = 0 s
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | . payload execution = 17829 s
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | . stage-out = 4 s
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | . log creation = 1 s
[2025-06-05 09:53:38] 2025-06-05 07:51:27,779 | INFO     | ..............................
[2025-06-05 09:53:38] 2025-06-05 07:51:28,231 | INFO     | 
[2025-06-05 09:53:38] 2025-06-05 07:51:28,231 | INFO     | job summary report
[2025-06-05 09:53:38] 2025-06-05 07:51:28,231 | INFO     | --------------------------------------------------
[2025-06-05 09:53:38] 2025-06-05 07:51:28,231 | INFO     | PanDA job id: 6668229934
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | task id: 44871837
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | errors: (none)
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | pilot state: finished 
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | transexitcode: 0
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | exeerrorcode: 0
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | exeerrordiag: 
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | exitcode: 0
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | exitmsg: OK
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | cpuconsumptiontime: 68979 s
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | nevents: 400
[2025-06-05 09:53:38] 2025-06-05 07:51:28,232 | INFO     | neventsw: 0
[2025-06-05 09:53:38] 2025-06-05 07:51:28,233 | INFO     | pid: 3886
[2025-06-05 09:53:38] 2025-06-05 07:51:28,233 | INFO     | pgrp: 3886
[2025-06-05 09:53:38] 2025-06-05 07:51:28,233 | INFO     | corecount: 8
[2025-06-05 09:53:38] 2025-06-05 07:51:28,233 | INFO     | event service: False
[2025-06-05 09:53:38] 2025-06-05 07:51:28,233 | INFO     | sizes: {0: 2397222, 1: 2397421, 10: 2397627, 12: 2397655, 17861: 2429150, 17866: 2438277, 17959: 2438391}
[2025-06-05 09:53:38] 2025-06-05 07:51:28,233 | INFO     | --------------------------------------------------
[2025-06-05 09:53:38] 2025-06-05 07:51:28,233 | INFO     | 
[2025-06-05 09:53:38] 2025-06-05 07:51:28,233 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-05 09:53:38] 2025-06-05 07:51:28,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:53:38] 2025-06-05 07:51:28,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:53:38] 2025-06-05 07:51:28,632 | INFO     | job 6668229934 has completed (purged errors)
[2025-06-05 09:53:38] 2025-06-05 07:51:28,632 | INFO     | overall cleanup function is called
[2025-06-05 09:53:38] 2025-06-05 07:51:29,645 | INFO     | --- collectZombieJob: --- 10, [3886]
[2025-06-05 09:53:38] 2025-06-05 07:51:29,645 | INFO     | zombie collector waiting for pid 3886
[2025-06-05 09:53:38] 2025-06-05 07:51:29,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:53:38] 2025-06-05 07:51:29,646 | INFO     | collected zombie processes
[2025-06-05 09:53:38] 2025-06-05 07:51:29,646 | INFO     | will attempt to kill all subprocesses of pid=3886
[2025-06-05 09:53:38] 2025-06-05 07:51:29,764 | INFO     | process IDs to be killed: [3886] (in reverse order)
[2025-06-05 09:53:38] 2025-06-05 07:51:30,684 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:53:38] 2025-06-05 07:51:30,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:53:38] 2025-06-05 07:51:30,688 | INFO     | did not find any defunct processes belonging to 3886
[2025-06-05 09:53:38] 2025-06-05 07:51:30,691 | INFO     | did not find any defunct processes belonging to 3886
[2025-06-05 09:53:38] 2025-06-05 07:51:30,692 | INFO     | ready for new job
[2025-06-05 09:53:38] 2025-06-05 07:51:30,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:53:38] 2025-06-05 07:51:30,695 | INFO     | **************************************
[2025-06-05 09:53:38] 2025-06-05 07:51:30,695 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:53:38] 2025-06-05 07:51:30,695 | INFO     | **************************************
[2025-06-05 09:53:38] 2025-06-05 07:51:30,695 | INFO     | 
[2025-06-05 09:53:38] 2025-06-05 07:51:30,696 | INFO     | pilot is running in a VM
[2025-06-05 09:53:38] 2025-06-05 07:51:30,696 | INFO     | architecture information:
[2025-06-05 09:53:38] 2025-06-05 07:51:30,704 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:53:38] 2025-06-05 07:51:30,916 | INFO     | cat /etc/os-release:
[2025-06-05 09:53:38] NAME="CentOS Linux"
[2025-06-05 09:53:38] VERSION="7 (Core)"
[2025-06-05 09:53:38] ID="centos"
[2025-06-05 09:53:38] ID_LIKE="rhel fedora"
[2025-06-05 09:53:38] VERSION_ID="7"
[2025-06-05 09:53:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:53:38] ANSI_COLOR="0;31"
[2025-06-05 09:53:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:53:38] HOME_URL="https://www.centos.org/"
[2025-06-05 09:53:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:53:38] 
[2025-06-05 09:53:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:53:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:53:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:53:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:53:38] 
[2025-06-05 09:53:38] 2025-06-05 07:51:30,916 | INFO     | **************************************
[2025-06-05 09:53:38] 2025-06-05 07:51:31,420 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-05 09:53:38] 2025-06-05 07:51:31,638 | INFO     | sufficient remaining disk space (497058578432 B)
[2025-06-05 09:53:38] 2025-06-05 07:51:31,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:53:38] 2025-06-05 07:51:31,638 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:53:38] 2025-06-05 07:51:31,638 | INFO     | update_server=False
[2025-06-05 09:53:38] 2025-06-05 07:51:31,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:53:38] 2025-06-05 07:51:31,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:53:38] 2025-06-05 07:51:31,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:53:38] 2025-06-05 07:51:32,139 | INFO     | all job control threads have been joined
[2025-06-05 09:53:38] 2025-06-05 07:51:32,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:53:38] 2025-06-05 07:51:32,334 | INFO     | aborting loop
[2025-06-05 09:53:38] 2025-06-05 07:51:32,407 | INFO     | all data control threads have been joined
[2025-06-05 09:53:38] 2025-06-05 07:51:32,583 | INFO     | all payload control threads have been joined
[2025-06-05 09:53:38] 2025-06-05 07:51:32,651 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:32,659 | INFO     | PID=25577 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 09:53:38] 2025-06-05 07:51:32,660 | INFO     | .. there are 9 such processes running
[2025-06-05 09:53:38] 2025-06-05 07:51:32,660 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:53:38] 2025-06-05 07:51:32,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:53:38] 2025-06-05 07:51:32,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:53:38] 2025-06-05 07:51:32,720 | INFO     | [job] validate thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:32,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:53:38] 2025-06-05 07:51:32,961 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,051 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,075 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,145 | INFO     | [job] control thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,186 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,340 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,413 | INFO     | [data] control thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,589 | INFO     | [payload] control thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,654 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,895 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:33,925 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:34,074 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:35,656 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:42,620 | INFO     | job.realtimelogging is not enabled
[2025-06-05 09:53:38] 2025-06-05 07:51:43,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:53:38] 2025-06-05 07:51:44,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471425955648)>', '<ExcThread(monitor, started 140470957090560)>']
[2025-06-05 09:53:38] 2025-06-05 07:51:44,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:53:38] 2025-06-05 07:51:44,730 | INFO     | [monitor] control thread has ended
[2025-06-05 09:53:38] 2025-06-05 07:51:49,505 | INFO     | all workflow threads have been joined
[2025-06-05 09:53:38] 2025-06-05 07:51:49,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:53:38] 2025-06-05 07:51:49,506 | INFO     | traces error code: 0
[2025-06-05 09:53:38] 2025-06-05 07:51:49,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:53:38] 2025-06-05 07:51:49,910 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:53:38] 2025-06-05 07:51:49,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:53:38] 2025-06-05 07:51:50,034 [wrapper] pilotpid: 25577
[2025-06-05 09:53:38] 2025-06-05 07:51:50,106 [wrapper] Pilot exit status: 0
[2025-06-05 09:53:38] 2025-06-05 07:51:50,521 [wrapper] pandaids: 6668229934
[2025-06-05 09:53:38] 2025-06-05 07:51:51,217 [wrapper] cleanup supervisor_pilot   954 25578
[2025-06-05 09:53:38] 2025-06-05 07:51:51,253 [wrapper] Test setup, not cleaning
[2025-06-05 09:53:38] 2025-06-05 07:51:51,322 [wrapper] apfmon messages muted
[2025-06-05 09:53:38] 2025-06-05 07:51:51,371 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:53:38] 2025-06-05 07:51:51,443 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:53:38]  *** Error codes and diagnostics ***
[2025-06-05 09:53:38]     "exeErrorCode": 0,
[2025-06-05 09:53:38]     "exeErrorDiag": "",
[2025-06-05 09:53:38]     "pilotErrorCode": 0,
[2025-06-05 09:53:38]     "pilotErrorDiag": "",
[2025-06-05 09:53:38]  *** Listing of results directory ***
[2025-06-05 09:53:38] total 417096
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc    495897 May 28 09:31 pilot3.tar.gz
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc      5111 May 28 09:34 queuedata.json
[2025-06-05 09:53:38] -rwx------. 1 boinc boinc     37140 May 28 09:35 runpilot2-wrapper.sh
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc       100 Jun  5 04:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:53:38] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 04:51 run_atlas
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc       105 Jun  5 04:51 job.xml
[2025-06-05 09:53:38] -rw-r--r--. 2 boinc boinc 223249699 Jun  5 04:51 EVNT.44871834._003150.pool.root.1
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc      6393 Jun  5 04:51 init_data.xml
[2025-06-05 09:53:38] -rw-r--r--. 2 boinc boinc     15093 Jun  5 04:51 start_atlas.sh
[2025-06-05 09:53:38] drwxrwx--x. 2 boinc boinc        68 Jun  5 04:51 shared
[2025-06-05 09:53:38] -rw-r--r--. 2 boinc boinc    508883 Jun  5 04:51 input.tar.gz
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc         0 Jun  5 04:51 boinc_lockfile
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc      2559 Jun  5 04:51 pandaJob.out
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc    987109 Jun  5 04:51 agis_schedconf.cvmfs.json
[2025-06-05 09:53:38] drwx------. 4 boinc boinc      4096 Jun  5 04:51 pilot3
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc 196121302 Jun  5 09:48 HITS.44871837._080692.pool.root.1
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc       531 Jun  5 09:48 boinc_task_state.xml
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc      1014 Jun  5 09:49 memory_monitor_summary.json
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc   1598969 Jun  5 09:49 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc    420502 Jun  5 09:49 log.44871837._080692.job.log.tgz.1
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc        95 Jun  5 09:50 pilot_heartbeat.json
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc      7683 Jun  5 09:51 heartbeat.json
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc      4881 Jun  5 09:51 pilotlog.txt
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc   1534150 Jun  5 09:51 log.44871837._080692.job.log.1
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc       357 Jun  5 09:51 output.list
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc       620 Jun  5 09:51 runtime_log
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc   1976320 Jun  5 09:51 result.tar.gz
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc      8673 Jun  5 09:51 runtime_log.err
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc       656 Jun  5 09:51 H6OMDmrUQe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMATKDmtIugWo.diag
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc      8192 Jun  5 09:53 boinc_mmap_file
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc        28 Jun  5 09:53 wrapper_checkpoint.txt
[2025-06-05 09:53:38] -rw-r--r--. 1 boinc boinc     20513 Jun  5 09:53 stderr.txt
[2025-06-05 09:53:38] HITS file was successfully produced:
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc 196121302 Jun  5 09:48 shared/HITS.pool.root.1
[2025-06-05 09:53:38]  *** Contents of shared directory: ***
[2025-06-05 09:53:38] total 411996
[2025-06-05 09:53:38] -rw-r--r--. 2 boinc boinc 223249699 Jun  5 04:51 ATLAS.root_0
[2025-06-05 09:53:38] -rw-r--r--. 2 boinc boinc     15093 Jun  5 04:51 start_atlas.sh
[2025-06-05 09:53:38] -rw-r--r--. 2 boinc boinc    508883 Jun  5 04:51 input.tar.gz
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc 196121302 Jun  5 09:48 HITS.pool.root.1
[2025-06-05 09:53:38] -rw-------. 1 boinc boinc   1976320 Jun  5 09:51 result.tar.gz
09:53:40 (21921): run_atlas exited; CPU time 69210.514328
09:53:40 (21921): called boinc_finish(0)

</stderr_txt>
]]>

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