Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:40:20 (4115477): wrapper (7.7.26015): starting
22:40:20 (4115477): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 22:40:20] Arguments: --nthreads 12
[2025-06-04 22:40:20] Threads: 12
[2025-06-04 22:40:20] Checking for CVMFS
[2025-06-04 22:40:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:40:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:40:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:40:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:40:20] 2.12.6.0 8433 32353 471396 146802 2 318 28947505 40960000 8915 16776704 1 99834234 99.675 85515030 24943 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:40:20] CVMFS is ok
[2025-06-04 22:40:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:40:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:40:20] Further information can be found at the LHC@home message board.
[2025-06-04 22:40:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:40:20] Checking for apptainer binary...
[2025-06-04 22:40:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:40:20] Running /usr/bin/apptainer --version
[2025-06-04 22:40:21] apptainer version 1.4.1-1.el9
[2025-06-04 22:40:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:40:21] c6-5-7-1.aglt2.org
[2025-06-04 22:40:21] apptainer works
[2025-06-04 22:40:21] Set ATHENA_PROC_NUMBER=12
[2025-06-04 22:40:21] Set ATHENA_CORE_NUMBER=12
[2025-06-04 22:40:21] Starting ATLAS job with PandaID=6668730652
[2025-06-04 22:40:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:15:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:15:45]  is_altstaged=None
[2025-06-05 00:15:45]  is_tar=False
[2025-06-05 00:15:45]  lfn=log.44871837._088200.job.log.tgz.1
[2025-06-05 00:15:45]  mtime=0
[2025-06-05 00:15:45]  protocol_id=None
[2025-06-05 00:15:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 00:15:45]  replicas=None
[2025-06-05 00:15:45]  scope=mc23_13p6TeV
[2025-06-05 00:15:45]  status=None
[2025-06-05 00:15:45]  status_code=0
[2025-06-05 00:15:45]  storage_token=
[2025-06-05 00:15:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668730652/log.44871837._088200.job.log.tgz.1
[2025-06-05 00:15:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/5f/log.44871837._088200.job.log.tgz.1
[2025-06-05 00:15:45]  workdir=None
[2025-06-05 00:15:45] ]
[2025-06-05 00:15:45] 2025-06-05 04:15:17,332 | INFO     | transferring file log.44871837._088200.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668730652/log.44871837._088200.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 00:15:45] 2025-06-05 04:15:17,332 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668730652/log.44871837._088200.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._088200.job
[2025-06-05 00:15:45] 2025-06-05 04:15:17,352 | INFO     | adding to output.list: log.44871837._088200.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/5f/log.44871837._088200.job.log.tg
[2025-06-05 00:15:45] 2025-06-05 04:15:17,354 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 00:15:45] 2025-06-05 04:15:17,354 | INFO     | summary of transferred files:
[2025-06-05 00:15:45] 2025-06-05 04:15:17,354 | INFO     |  -- lfn=log.44871837._088200.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 00:15:45] 2025-06-05 04:15:17,354 | INFO     | stage-out finished correctly
[2025-06-05 00:15:45] 2025-06-05 04:15:19,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 00:15:45] 2025-06-05 04:15:19,229 | INFO     | monitor loop #407: job 0:6668730652 is in state 'finished'
[2025-06-05 00:15:45] 2025-06-05 04:15:19,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:15:45] 2025-06-05 04:15:20,990 | INFO     | job 6668730652 has state=finished
[2025-06-05 00:15:45] 2025-06-05 04:15:20,992 | INFO     | preparing for final server update for job 6668730652 in state='finished'
[2025-06-05 00:15:45] 2025-06-05 04:15:21,089 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-05 00:15:45] 2025-06-05 04:15:21,090 | INFO     | this job has now completed (state=finished)
[2025-06-05 00:15:45] 2025-06-05 04:15:21,090 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 00:15:45] 2025-06-05 04:15:21,090 | INFO     | log transfer has been attempted: DONE
[2025-06-05 00:15:45] 2025-06-05 04:15:21,090 | INFO     | job 6668730652 has finished - writing final server update
[2025-06-05 00:15:45] 2025-06-05 04:15:21,090 | INFO     | total number of processed events: 400 (read)
[2025-06-05 00:15:45] 2025-06-05 04:15:21,107 | INFO     | executing command: lscpu
[2025-06-05 00:15:45] 2025-06-05 04:15:21,183 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 00:15:45] 2025-06-05 04:15:21,735 | INFO     | monitor loop #408: job 0:6668730652 is in state 'finished'
[2025-06-05 00:15:45] 2025-06-05 04:15:21,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:15:45] 2025-06-05 04:15:24,239 | INFO     | monitor loop #409: job 0:6668730652 is in state 'finished'
[2025-06-05 00:15:45] 2025-06-05 04:15:24,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:15:45] 2025-06-05 04:15:25,204 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 00:15:45] 2025-06-05 04:15:25,205 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668730652/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:15:45] 2025-06-05 04:15:25,206 | INFO     | extracted standard info from prmon json
[2025-06-05 00:15:45] 2025-06-05 04:15:25,206 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:15:45] 2025-06-05 04:15:25,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:15:45] 2025-06-05 04:15:25,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:15:45] 2025-06-05 04:15:25,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:15:45] 2025-06-05 04:15:25,209 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:15:45] 2025-06-05 04:15:25,209 | INFO     | sum of square deviations: 197189311.8255817
[2025-06-05 00:15:45] 2025-06-05 04:15:25,210 | INFO     | sum of deviations: -18818631142.87209
[2025-06-05 00:15:45] 2025-06-05 04:15:25,210 | INFO     | mean x: 1749094153.639535
[2025-06-05 00:15:45] 2025-06-05 04:15:25,210 | INFO     | mean y: 2492617.197674419
[2025-06-05 00:15:45] 2025-06-05 04:15:25,210 | INFO     | -- intersect: 166926132680.46332
[2025-06-05 00:15:45] 2025-06-05 04:15:25,210 | INFO     | intersect: 166926132680.46332
[2025-06-05 00:15:45] 2025-06-05 04:15:25,210 | INFO     | chi2: 0.15673499928141202
[2025-06-05 00:15:45] 2025-06-05 04:15:25,210 | INFO     | -- intersect: 166926132680.46332
[2025-06-05 00:15:45] 2025-06-05 04:15:25,210 | INFO     | current memory leak: -95.43 B/s (using 86 data points, chi2=0.16)
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | ..............................
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | . Timing measurements:
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | . get job = 0 s
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | . initial setup = 2 s
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | . payload setup = 6 s
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | . stage-in = 0 s
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | . payload execution = 5660 s
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | . stage-out = 1 s
[2025-06-05 00:15:45] 2025-06-05 04:15:25,211 | INFO     | . log creation = 0 s
[2025-06-05 00:15:45] 2025-06-05 04:15:25,212 | INFO     | ..............................
[2025-06-05 00:15:45] 2025-06-05 04:15:25,305 | INFO     | 
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | job summary report
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | --------------------------------------------------
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | PanDA job id: 6668730652
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | task id: 44871837
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | errors: (none)
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | pilot state: finished 
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | transexitcode: 0
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | exeerrorcode: 0
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | exeerrordiag: 
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | exitcode: 0
[2025-06-05 00:15:45] 2025-06-05 04:15:25,306 | INFO     | exitmsg: OK
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | cpuconsumptiontime: 48861 s
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | nevents: 400
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | neventsw: 0
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | pid: 4127430
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | pgrp: 4127430
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | corecount: 12
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | event service: False
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 5670: 2424237, 5671: 2433178, 5673: 2433234, 5679: 2433532}
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | --------------------------------------------------
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | 
[2025-06-05 00:15:45] 2025-06-05 04:15:25,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 00:15:45] 2025-06-05 04:15:25,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,328 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:15:45] 2025-06-05 04:15:25,329 | INFO     | job 6668730652 has completed (purged errors)
[2025-06-05 00:15:45] 2025-06-05 04:15:25,329 | INFO     | overall cleanup function is called
[2025-06-05 00:15:45] 2025-06-05 04:15:26,335 | INFO     | --- collectZombieJob: --- 10, [4127430]
[2025-06-05 00:15:45] 2025-06-05 04:15:26,336 | INFO     | zombie collector waiting for pid 4127430
[2025-06-05 00:15:45] 2025-06-05 04:15:26,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:15:45] 2025-06-05 04:15:26,336 | INFO     | collected zombie processes
[2025-06-05 00:15:45] 2025-06-05 04:15:26,337 | INFO     | will attempt to kill all subprocesses of pid=4127430
[2025-06-05 00:15:45] 2025-06-05 04:15:26,599 | INFO     | process IDs to be killed: [4127430] (in reverse order)
[2025-06-05 00:15:45] 2025-06-05 04:15:26,678 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:15:45] 2025-06-05 04:15:26,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:15:45] 2025-06-05 04:15:26,689 | INFO     | did not find any defunct processes belonging to 4127430
[2025-06-05 00:15:45] 2025-06-05 04:15:26,698 | INFO     | did not find any defunct processes belonging to 4127430
[2025-06-05 00:15:45] 2025-06-05 04:15:26,699 | INFO     | ready for new job
[2025-06-05 00:15:45] 2025-06-05 04:15:26,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:15:45] 2025-06-05 04:15:26,702 | INFO     | **************************************
[2025-06-05 00:15:45] 2025-06-05 04:15:26,702 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:15:45] 2025-06-05 04:15:26,702 | INFO     | **************************************
[2025-06-05 00:15:45] 2025-06-05 04:15:26,702 | INFO     | 
[2025-06-05 00:15:45] 2025-06-05 04:15:26,706 | INFO     | architecture information:
[2025-06-05 00:15:45] 2025-06-05 04:15:26,706 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:15:45] 2025-06-05 04:15:26,721 | INFO     | cat /etc/os-release:
[2025-06-05 00:15:45] NAME="CentOS Linux"
[2025-06-05 00:15:45] VERSION="7 (Core)"
[2025-06-05 00:15:45] ID="centos"
[2025-06-05 00:15:45] ID_LIKE="rhel fedora"
[2025-06-05 00:15:45] VERSION_ID="7"
[2025-06-05 00:15:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:15:45] ANSI_COLOR="0;31"
[2025-06-05 00:15:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:15:45] HOME_URL="https://www.centos.org/"
[2025-06-05 00:15:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:15:45] 
[2025-06-05 00:15:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:15:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:15:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:15:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:15:45] 
[2025-06-05 00:15:45] 2025-06-05 04:15:26,722 | INFO     | **************************************
[2025-06-05 00:15:45] 2025-06-05 04:15:27,225 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 00:15:45] 2025-06-05 04:15:27,241 | INFO     | sufficient remaining disk space (75521589248 B)
[2025-06-05 00:15:45] 2025-06-05 04:15:27,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:15:45] 2025-06-05 04:15:27,242 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:15:45] 2025-06-05 04:15:27,242 | INFO     | update_server=False
[2025-06-05 00:15:45] 2025-06-05 04:15:27,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:15:45] 2025-06-05 04:15:27,242 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 00:15:45] 2025-06-05 04:15:27,244 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:15:45] 2025-06-05 04:15:27,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:15:45] 2025-06-05 04:15:27,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:15:45] 2025-06-05 04:15:27,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:15:45] 2025-06-05 04:15:27,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:15:45] 2025-06-05 04:15:27,754 | INFO     | aborting loop
[2025-06-05 00:15:45] 2025-06-05 04:15:27,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:15:45] 2025-06-05 04:15:28,074 | INFO     | all payload control threads have been joined
[2025-06-05 00:15:45] 2025-06-05 04:15:28,180 | INFO     | all job control threads have been joined
[2025-06-05 00:15:45] 2025-06-05 04:15:28,188 | INFO     | all data control threads have been joined
[2025-06-05 00:15:45] 2025-06-05 04:15:28,247 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:28,250 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:28,332 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:28,435 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:28,484 | INFO     | [job] validate thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:28,759 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:29,058 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:29,077 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:29,079 | INFO     | [payload] control thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:29,138 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:29,186 | INFO     | [job] control thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:29,192 | INFO     | [data] control thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:29,372 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:29,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:15:45] 2025-06-05 04:15:29,991 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:33,795 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:37,719 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:15:45] 2025-06-05 04:15:38,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:15:45] 2025-06-05 04:15:39,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791562458944)>', '<ExcThread(monitor, started 139790691321600)>']
[2025-06-05 00:15:45] 2025-06-05 04:15:40,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:15:45] 2025-06-05 04:15:40,312 | INFO     | [monitor] control thread has ended
[2025-06-05 00:15:45] 2025-06-05 04:15:44,840 | INFO     | all workflow threads have been joined
[2025-06-05 00:15:45] 2025-06-05 04:15:44,841 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:15:45] 2025-06-05 04:15:44,841 | INFO     | traces error code: 0
[2025-06-05 00:15:45] 2025-06-05 04:15:44,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:15:45] 2025-06-05 04:15:45,016 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:15:45] 2025-06-05 04:15:45,020 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:15:45] 2025-06-05 04:15:45,023 [wrapper] pilotpid: 4119044
[2025-06-05 00:15:45] 2025-06-05 04:15:45,025 [wrapper] Pilot exit status: 0
[2025-06-05 00:15:45] 2025-06-05 04:15:45,036 [wrapper] pandaids: 6668730652
[2025-06-05 00:15:45] 2025-06-05 04:15:45,088 [wrapper] cleanup supervisor_pilot  751786 4119045
[2025-06-05 00:15:45] 2025-06-05 04:15:45,091 [wrapper] Test setup, not cleaning
[2025-06-05 00:15:45] 2025-06-05 04:15:45,094 [wrapper] apfmon messages muted
[2025-06-05 00:15:45] 2025-06-05 04:15:45,097 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:15:45] 2025-06-05 04:15:45,100 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:15:45]  *** Error codes and diagnostics ***
[2025-06-05 00:15:45]     "exeErrorCode": 0,
[2025-06-05 00:15:45]     "exeErrorDiag": "",
[2025-06-05 00:15:45]     "pilotErrorCode": 0,
[2025-06-05 00:15:45]     "pilotErrorDiag": "",
[2025-06-05 00:15:45]  *** Listing of results directory ***
[2025-06-05 00:15:45] total 414988
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas    495897 May 28 13:58 pilot3.tar.gz
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas      5111 May 28 14:03 queuedata.json
[2025-06-05 00:15:45] -rwx------. 1 boincer umatlas     37140 May 28 14:03 runpilot2-wrapper.sh
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas       100 Jun  4 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:15:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 22:40 run_atlas
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas       105 Jun  4 22:40 job.xml
[2025-06-05 00:15:45] -rw-r--r--. 2 boincer umatlas 224060933 Jun  4 22:40 EVNT.44871834._003434.pool.root.1
[2025-06-05 00:15:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:40 start_atlas.sh
[2025-06-05 00:15:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 22:40 shared
[2025-06-05 00:15:45] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 22:40 input.tar.gz
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas         0 Jun  4 22:40 boinc_lockfile
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 22:40 pandaJob.out
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas    987109 Jun  4 22:40 agis_schedconf.cvmfs.json
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas   1598969 Jun  4 22:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:15:45] drwx------. 4 boincer umatlas      4096 Jun  4 22:40 pilot3
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas      6839 Jun  5 00:12 init_data.xml
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas       529 Jun  5 00:14 boinc_task_state.xml
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas 195232036 Jun  5 00:14 HITS.44871837._088200.pool.root.1
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas        95 Jun  5 00:15 pilot_heartbeat.json
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas      1054 Jun  5 00:15 memory_monitor_summary.json
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas    367190 Jun  5 00:15 log.44871837._088200.job.log.tgz.1
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas      7721 Jun  5 00:15 heartbeat.json
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 00:15 boinc_mmap_file
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas        27 Jun  5 00:15 wrapper_checkpoint.txt
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas      4548 Jun  5 00:15 pilotlog.txt
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas    543186 Jun  5 00:15 log.44871837._088200.job.log.1
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas       357 Jun  5 00:15 output.list
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas       620 Jun  5 00:15 runtime_log
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas    931840 Jun  5 00:15 result.tar.gz
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas      8661 Jun  5 00:15 runtime_log.err
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas       653 Jun  5 00:15 ea2KDmDJae7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQuTKDmNUqUTo.diag
[2025-06-05 00:15:45] -rw-r--r--. 1 boincer umatlas     21426 Jun  5 00:15 stderr.txt
[2025-06-05 00:15:45] HITS file was successfully produced:
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas 195232036 Jun  5 00:14 shared/HITS.pool.root.1
[2025-06-05 00:15:45]  *** Contents of shared directory: ***
[2025-06-05 00:15:45] total 410904
[2025-06-05 00:15:45] -rw-r--r--. 2 boincer umatlas 224060933 Jun  4 22:40 ATLAS.root_0
[2025-06-05 00:15:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:40 start_atlas.sh
[2025-06-05 00:15:45] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 22:40 input.tar.gz
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas 195232036 Jun  5 00:14 HITS.pool.root.1
[2025-06-05 00:15:45] -rw-------. 1 boincer umatlas    931840 Jun  5 00:15 result.tar.gz
00:16:06 (4115477): run_atlas exited; CPU time 48929.705865
00:16:06 (4115477): called boinc_finish(0)

</stderr_txt>
]]>

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