Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-05 01:08:47 (99622): Detected: vboxwrapper 26206
2025-06-05 01:08:47 (99622): Detected: BOINC client v8.0.2
2025-06-05 01:08:47 (99622): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-06-05 01:08:47 (99622): Detected: Sandbox Configuration Enabled
2025-06-05 01:08:47 (99622): Successfully copied 'init_data.xml' to the shared directory.
2025-06-05 01:08:47 (99622): Create VM. (boinc_cfbdccb683ae3b1b, slot#3)
2025-06-05 01:08:48 (99622): Setting Memory Size for VM. (4200MB)
2025-06-05 01:08:48 (99622): Setting CPU Count for VM. (2)
2025-06-05 01:08:48 (99622): Setting Chipset Options for VM.
2025-06-05 01:08:48 (99622): Setting Graphics Controller Options for VM.
2025-06-05 01:08:48 (99622): Setting Boot Options for VM.
2025-06-05 01:08:48 (99622): Setting Network Configuration for NAT.
2025-06-05 01:08:48 (99622): Enabling VM Network Access.
2025-06-05 01:08:48 (99622): Disabling USB Support for VM.
2025-06-05 01:08:48 (99622): Disabling COM Port Support for VM.
2025-06-05 01:08:48 (99622): Disabling Audio Support for VM.
2025-06-05 01:08:48 (99622): Disabling Clipboard Support for VM.
2025-06-05 01:08:48 (99622): Disabling Drag and Drop Support for VM.
2025-06-05 01:08:48 (99622): Adding storage controller(s) to VM.
2025-06-05 01:08:48 (99622): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-05 01:08:49 (99622): Adding VirtualBox Guest Additions to VM.
2025-06-05 01:08:50 (99622): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-05 01:08:50 (99622): forwarding host port 52811 to guest port 80
2025-06-05 01:08:50 (99622): Enabling remote desktop for VM.
2025-06-05 01:08:50 (99622): Required extension pack not installed, remote desktop not enabled.
2025-06-05 01:08:50 (99622): Enabling shared directory for VM.
2025-06-05 01:08:50 (99622): Starting VM using VBoxManage interface. (boinc_cfbdccb683ae3b1b, slot#3)
2025-06-05 01:08:53 (99622): Successfully started VM. (PID = '99692')
2025-06-05 01:08:53 (99622): Reporting VM Process ID to BOINC.
2025-06-05 01:08:53 (99622): Guest Log: BIOS: VirtualBox 7.0.14
2025-06-05 01:08:53 (99622): Guest Log: CPUID EDX: 0x178bfbff
2025-06-05 01:08:53 (99622): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-05 01:08:53 (99622): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-05 01:08:53 (99622): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-05 01:08:53 (99622): Detected: Web Application Enabled (http://localhost:52811)
2025-06-05 01:08:53 (99622): Preference change detected
2025-06-05 01:08:53 (99622): Setting CPU throttle for VM. (100%)
2025-06-05 01:08:53 (99622): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-05 01:08:55 (99622): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-05 01:08:55 (99622): Guest Log: BIOS: Booting from Hard Disk...
2025-06-05 01:08:59 (99622): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-05 01:08:59 (99622): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-05 01:08:59 (99622): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-05 01:09:11 (99622): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-05 01:09:11 (99622): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-05 01:09:36 (99622): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-05 01:09:36 (99622): Guest Log: 00:00:00.000158 main     Log opened 2025-06-05T05:09:34.292407000Z
2025-06-05 01:09:36 (99622): Guest Log: 00:00:00.000325 main     OS Product: Linux
2025-06-05 01:09:36 (99622): Guest Log: 00:00:00.000402 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-05 01:09:36 (99622): Guest Log: 00:00:00.000475 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-05 01:09:36 (99622): Guest Log: 00:00:00.000531 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-05 01:09:36 (99622): Guest Log: 00:00:00.000532 main     Process ID: 1270
2025-06-05 01:09:36 (99622): Guest Log: 00:00:00.000532 main     Package type: LINUX_64BITS_GENERIC
2025-06-05 01:09:36 (99622): Guest Log: 00:00:00.001795 main     5.2.32 r132073 started. Verbose level = 0
2025-06-05 01:09:36 (99622): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-05 01:09:36 (99622): Guest Log: [INFO] Mounting shared directory
2025-06-05 01:09:37 (99622): Guest Log: [INFO] Checking for init_data.xml
2025-06-05 01:09:45 (99622): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-05 01:09:45 (99622): Guest Log: [INFO] Detected branch: prod
2025-06-05 01:09:45 (99622): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-05 01:09:45 (99622): Guest Log: Copying input files
2025-06-05 01:09:51 (99622): Guest Log: Copied input files into RunAtlas.
2025-06-05 01:09:51 (99622): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-05 01:09:51 (99622): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-05 01:09:51 (99622): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-05 01:09:51 (99622): Guest Log: Further information can be found at the LHC@home message board.
2025-06-05 01:10:00 (99622): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-05 01:10:01 (99622): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-05 01:10:01 (99622): Guest Log: 2.6.3.0 1545 0 32108 146806 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-05 01:10:03 (99622): Guest Log: copied the webapp to /var/www
2025-06-05 01:10:03 (99622): Guest Log: ATHENA_PROC_NUMBER=2
2025-06-05 01:10:03 (99622): Guest Log: ATHENA_CORE_NUMBER=2
2025-06-05 01:10:04 (99622): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-05 01:10:04 (99622): Guest Log:  *** Starting ATLAS job. (PandaID=6667366072 taskID=44871837) ***
2025-06-05 02:48:09 (99622): Status Report: Elapsed Time: '6000.000000'
2025-06-05 02:48:09 (99622): Status Report: CPU Time: '11184.320000'
2025-06-05 04:27:24 (99622): Status Report: Elapsed Time: '12000.000000'
2025-06-05 04:27:25 (99622): Status Report: CPU Time: '22802.820000'
2025-06-05 06:06:49 (99622): Status Report: Elapsed Time: '18000.000000'
2025-06-05 06:06:49 (99622): Status Report: CPU Time: '34726.650000'
2025-06-05 06:39:22 (99622): Guest Log:  *** Job finished ***
2025-06-05 06:39:22 (99622): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:13,563 | INFO     | [data] queue_monitor thread has finished
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:19,913 | INFO     | job.realtimelogging is not enabled
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:20,915 | INFO     | [payload] run_realtimelog thread has finished
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:21,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797206345536)>', '<ExcThread(monitor, started 139796387182336)>']
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:21,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:21,459 | INFO     | [monitor] control thread has ended
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,054 | INFO     | all workflow threads have been joined
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,054 | INFO     | end of generic workflow (traces error code: 0)
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,054 | INFO     | traces error code: 0
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,402 [wrapper] ==== pilot stdout END ====
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,408 [wrapper] ==== wrapper stdout RESUME ====
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,415 [wrapper] pilotpid: 5820
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,421 [wrapper] Pilot exit status: 0
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,552 [wrapper] pandaids: 6667366072
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,594 [wrapper] cleanup supervisor_pilot 22434 5821
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,599 [wrapper] Test setup, not cleaning
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,609 [wrapper] apfmon messages muted
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,616 [wrapper] ==== wrapper stdout END ====
2025-06-05 06:39:22 (99622): Guest Log: 2025-06-05 10:38:26,624 [wrapper] ==== wrapper stderr END ====
2025-06-05 06:39:22 (99622): Guest Log:  *** Error codes and diagnostics ***
2025-06-05 06:39:22 (99622): Guest Log:     "exeErrorCode": 0,
2025-06-05 06:39:22 (99622): Guest Log:     "exeErrorDiag": "",
2025-06-05 06:39:22 (99622): Guest Log:     "pilotErrorCode": 0,
2025-06-05 06:39:22 (99622): Guest Log:     "pilotErrorDiag": "",
2025-06-05 06:39:22 (99622): Guest Log:  *** Listing of results directory ***
2025-06-05 06:39:22 (99622): Guest Log: total 197192
2025-06-05 06:39:22 (99622): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 17:43 pilot3.tar.gz
2025-06-05 06:39:22 (99622): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 17:46 queuedata.json
2025-06-05 06:39:22 (99622): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 17:49 runpilot2-wrapper.sh
2025-06-05 06:39:22 (99622): Guest Log: -rw-r-----. 1 atlas atlas     15093 Jun  5 05:09 start_atlas.sh
2025-06-05 06:39:22 (99622): Guest Log: -rw-r-----. 1 atlas atlas    508882 Jun  5 05:09 input.tar.gz
2025-06-05 06:39:22 (99622): Guest Log: -rw-r--r--. 1 atlas atlas      8549 Jun  5 05:09 init_data.xml
2025-06-05 06:39:22 (99622): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 05:09 EVNT.44871834._002797.pool.root.1 -> /data/./ATLAS.root_0
2025-06-05 06:39:22 (99622): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jun  5 05:10 pandaJob.out
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas    987109 Jun  5 05:10 agis_schedconf.cvmfs.json
2025-06-05 06:39:22 (99622): Guest Log: drwx------. 4 atlas atlas      4096 Jun  5 05:11 pilot3
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas 194184541 Jun  5 10:37 HITS.44871837._071196.pool.root.1
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas      1027 Jun  5 10:37 memory_monitor_summary.json
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  5 10:37 agis_ddmendpoints.agis.ALL.json
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas    331136 Jun  5 10:37 log.44871837._071196.job.log.tgz.1
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas      7722 Jun  5 10:38 heartbeat.json
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas        95 Jun  5 10:38 pilot_heartbeat.json
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas      4794 Jun  5 10:38 pilotlog.txt
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas   1660176 Jun  5 10:38 log.44871837._071196.job.log.1
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 10:38 output.list
2025-06-05 06:39:22 (99622): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  5 10:38 runtime_log
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas   2007040 Jun  5 10:38 result.tar.gz
2025-06-05 06:39:22 (99622): Guest Log: -rw-r--r--. 1 atlas atlas      8638 Jun  5 10:38 runtime_log.err
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas       672 Jun  5 10:38 PVQMDmQbDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSCSKDmf3GzVo.diag
2025-06-05 06:39:22 (99622): Guest Log: Looking for outputfile HITS.44871837._071196.pool.root.1
2025-06-05 06:39:22 (99622): Guest Log: HITS file was successfully produced
2025-06-05 06:39:22 (99622): Guest Log: -rw-------. 1 atlas atlas 194184541 Jun  5 10:37 /home/atlas/RunAtlas/HITS.44871837._071196.pool.root.1
2025-06-05 06:39:23 (99622): Guest Log: Successfully finished the ATLAS job!
2025-06-05 06:39:23 (99622): Guest Log: Copying the results back to the shared directory!
2025-06-05 06:39:23 (99622): Guest Log:  *** Contents of shared directory: ***
2025-06-05 06:39:23 (99622): Guest Log: total 226748
2025-06-05 06:39:23 (99622): Guest Log: -rw-rw----. 1 root root 227524607 Jun  5 05:08 ATLAS.root_0
2025-06-05 06:39:23 (99622): Guest Log: -rw-rw-r--. 1 root root      8549 Jun  5 05:08 init_data.xml
2025-06-05 06:39:23 (99622): Guest Log: -rw-rw----. 1 root root    508882 Jun  5 05:08 input.tar.gz
2025-06-05 06:39:23 (99622): Guest Log: -rw-r--r--. 1 root root   2007040 Jun  5  2025 result.tar.gz
2025-06-05 06:39:23 (99622): Guest Log: -rw-rw----. 1 root root     15093 Jun  5 05:08 start_atlas.sh
2025-06-05 06:39:23 (99622): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-05 06:39:23 (99622): VM Completion File Detected.
2025-06-05 06:39:23 (99622): Powering off VM.
2025-06-05 06:39:24 (99622): Successfully stopped VM.
2025-06-05 06:39:24 (99622): Deregistering VM. (boinc_cfbdccb683ae3b1b, slot#3)
2025-06-05 06:39:24 (99622): Removing network bandwidth throttle group from VM.
2025-06-05 06:39:24 (99622): Removing VM from VirtualBox.
06:39:29 (99622): called boinc_finish(0)

</stderr_txt>
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