Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:36:39 (120646): wrapper (7.7.26015): starting
22:36:39 (120646): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:36:39] Arguments: --nthreads 8
[2025-06-04 22:36:39] Threads: 8
[2025-06-04 22:36:39] Checking for CVMFS
[2025-06-04 22:36:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:36:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:36:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:36:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:36:41] 2.11.2.0 7082 29631 201968 146802 1 71 16151326 18432001 19623 130560 0 124685410 99.598 102513161 31215 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 22:36:41] CVMFS is ok
[2025-06-04 22:36:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:36:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:36:41] Further information can be found at the LHC@home message board.
[2025-06-04 22:36:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:36:41] Checking for apptainer binary...
[2025-06-04 22:36:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:36:41] Running /usr/bin/apptainer --version
[2025-06-04 22:36:41] apptainer version 1.3.2-1.el7
[2025-06-04 22:36:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:36:48] c-211-35-3.aglt2.org
[2025-06-04 22:36:48] apptainer works
[2025-06-04 22:36:48] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:36:48] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:36:48] Starting ATLAS job with PandaID=6668789411
[2025-06-04 22:36:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:22:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:22:09] 2025-06-05 06:21:53,609 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:22:09] 2025-06-05 06:21:53,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:22:09] 2025-06-05 06:21:53,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:22:09] 2025-06-05 06:21:53,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:22:09] 2025-06-05 06:21:53,632 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:22:09] 2025-06-05 06:21:53,646 | INFO     | sum of square deviations: 3168492759.096772
[2025-06-05 02:22:09] 2025-06-05 06:21:53,648 | INFO     | sum of deviations: 19388985769.580666
[2025-06-05 02:22:09] 2025-06-05 06:21:53,648 | INFO     | mean x: 1749097861.064516
[2025-06-05 02:22:09] 2025-06-05 06:21:53,648 | INFO     | mean y: 2448304.3870967743
[2025-06-05 02:22:09] 2025-06-05 06:21:53,648 | INFO     | -- intersect: -10700821709.539454
[2025-06-05 02:22:09] 2025-06-05 06:21:53,648 | INFO     | intersect: -10700821709.539454
[2025-06-05 02:22:09] 2025-06-05 06:21:53,649 | INFO     | chi2: 5.29919621658722
[2025-06-05 02:22:09] 2025-06-05 06:21:53,666 | INFO     | sum of square deviations: 2954483714.075466
[2025-06-05 02:22:09] 2025-06-05 06:21:53,668 | INFO     | sum of deviations: 47677947882.62266
[2025-06-05 02:22:09] 2025-06-05 06:21:53,668 | INFO     | mean x: 1749097708.5660377
[2025-06-05 02:22:09] 2025-06-05 06:21:53,668 | INFO     | mean y: 2468176.169811321
[2025-06-05 02:22:09] 2025-06-05 06:21:53,668 | INFO     | -- intersect: -28223576527.793697
[2025-06-05 02:22:09] 2025-06-05 06:21:53,668 | INFO     | intersect: -28223576527.793697
[2025-06-05 02:22:09] 2025-06-05 06:21:53,669 | INFO     | chi2: 3.7612067653176475
[2025-06-05 02:22:09] 2025-06-05 06:21:53,669 | INFO     | current chi2=3.7612067653176475 (change=29.02307045086295 %)
[2025-06-05 02:22:09] 2025-06-05 06:21:53,669 | INFO     | sum of square deviations: 2750335319.0531535
[2025-06-05 02:22:09] 2025-06-05 06:21:53,686 | INFO     | sum of deviations: 46732946621.57967
[2025-06-05 02:22:09] 2025-06-05 06:21:53,687 | INFO     | mean x: 1749097556.067633
[2025-06-05 02:22:09] 2025-06-05 06:21:53,687 | INFO     | mean y: 2467470.1014492754
[2025-06-05 02:22:09] 2025-06-05 06:21:53,687 | INFO     | -- intersect: -29717720522.02476
[2025-06-05 02:22:09] 2025-06-05 06:21:53,687 | INFO     | intersect: -29717720522.02476
[2025-06-05 02:22:09] 2025-06-05 06:21:53,687 | INFO     | chi2: 3.766251466704106
[2025-06-05 02:22:09] 2025-06-05 06:21:53,687 | INFO     | current chi2=3.766251466704106 (change=-0.13412454303166907 %)
[2025-06-05 02:22:09] 2025-06-05 06:21:53,688 | INFO     | right removable region: 206
[2025-06-05 02:22:09] 2025-06-05 06:21:53,688 | INFO     | sum of square deviations: 2954475174.075466
[2025-06-05 02:22:09] 2025-06-05 06:21:53,689 | INFO     | sum of deviations: -43340226176.90566
[2025-06-05 02:22:09] 2025-06-05 06:21:53,689 | INFO     | mean x: 1749098013.5660377
[2025-06-05 02:22:09] 2025-06-05 06:21:53,689 | INFO     | mean y: 2492892.4575471696
[2025-06-05 02:22:09] 2025-06-05 06:21:53,690 | INFO     | -- intersect: 25660621340.68534
[2025-06-05 02:22:09] 2025-06-05 06:21:53,690 | INFO     | intersect: 25660621340.68534
[2025-06-05 02:22:09] 2025-06-05 06:21:53,706 | INFO     | chi2: 1.9995416108965456
[2025-06-05 02:22:09] 2025-06-05 06:21:53,706 | INFO     | current chi2=1.9995416108965456 (change=62.26707732320418 %)
[2025-06-05 02:22:09] 2025-06-05 06:21:53,713 | INFO     | sum of square deviations: 2750318239.0531535
[2025-06-05 02:22:09] 2025-06-05 06:21:53,714 | INFO     | sum of deviations: -55918848396.94202
[2025-06-05 02:22:09] 2025-06-05 06:21:53,714 | INFO     | mean x: 1749098166.067633
[2025-06-05 02:22:09] 2025-06-05 06:21:53,715 | INFO     | mean y: 2502221.7101449277
[2025-06-05 02:22:09] 2025-06-05 06:21:53,715 | INFO     | -- intersect: 35564770540.65831
[2025-06-05 02:22:09] 2025-06-05 06:21:53,715 | INFO     | intersect: 35564770540.65831
[2025-06-05 02:22:09] 2025-06-05 06:21:53,715 | INFO     | chi2: 1.8022942214733897
[2025-06-05 02:22:09] 2025-06-05 06:21:53,715 | INFO     | current chi2=1.8022942214733897 (change=9.864630390698146 %)
[2025-06-05 02:22:09] 2025-06-05 06:21:53,715 | INFO     | left removable region: 20
[2025-06-05 02:22:09] 2025-06-05 06:21:53,716 | INFO     | sum of square deviations: 1995307727.4462361
[2025-06-05 02:22:09] 2025-06-05 06:21:53,717 | INFO     | sum of deviations: -22026954293.827938
[2025-06-05 02:22:09] 2025-06-05 06:21:53,732 | INFO     | mean x: 1749098135.5752687
[2025-06-05 02:22:09] 2025-06-05 06:21:53,732 | INFO     | mean y: 2521269.559139785
[2025-06-05 02:22:09] 2025-06-05 06:21:53,732 | INFO     | -- intersect: 19311475050.36097
[2025-06-05 02:22:09] 2025-06-05 06:21:53,732 | INFO     | intersect: 19311475050.36097
[2025-06-05 02:22:09] 2025-06-05 06:21:53,733 | INFO     | chi2: 0.1333645270951618
[2025-06-05 02:22:09] 2025-06-05 06:21:53,733 | INFO     | -- intersect: 19311475050.36097
[2025-06-05 02:22:09] 2025-06-05 06:21:53,733 | INFO     | current memory leak: -11.04 B/s (using 186 data points, chi2=0.13)
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | ..............................
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | . Timing measurements:
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | . get job = 0 s
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | . initial setup = 4 s
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | . payload setup = 75 s
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | . stage-in = 0 s
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | . payload execution = 13243 s
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | . stage-out = 4 s
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | . log creation = 0 s
[2025-06-05 02:22:09] 2025-06-05 06:21:53,734 | INFO     | ..............................
[2025-06-05 02:22:09] 2025-06-05 06:21:54,358 | INFO     | 
[2025-06-05 02:22:09] 2025-06-05 06:21:54,358 | INFO     | job summary report
[2025-06-05 02:22:09] 2025-06-05 06:21:54,358 | INFO     | --------------------------------------------------
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | PanDA job id: 6668789411
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | task id: 44871837
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | errors: (none)
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | pilot state: finished 
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | transexitcode: 0
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | exeerrorcode: 0
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | exeerrordiag: 
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | exitcode: 0
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | exitmsg: OK
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | cpuconsumptiontime: 54872 s
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | nevents: 400
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | neventsw: 0
[2025-06-05 02:22:09] 2025-06-05 06:21:54,359 | INFO     | pid: 134682
[2025-06-05 02:22:09] 2025-06-05 06:21:54,360 | INFO     | pgrp: 134682
[2025-06-05 02:22:09] 2025-06-05 06:21:54,360 | INFO     | corecount: 8
[2025-06-05 02:22:09] 2025-06-05 06:21:54,360 | INFO     | event service: False
[2025-06-05 02:22:09] 2025-06-05 06:21:54,360 | INFO     | sizes: {0: 2396562, 1: 2397247, 2: 2397446, 13: 2397446, 24: 2397502, 26: 2397736, 35: 2397892, 13322: 2427884, 13323: 2427883, 13328: 2436880, 13330: 2436936, 133
[2025-06-05 02:22:09] 2025-06-05 06:21:54,360 | INFO     | --------------------------------------------------
[2025-06-05 02:22:09] 2025-06-05 06:21:54,360 | INFO     | 
[2025-06-05 02:22:09] 2025-06-05 06:21:54,360 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 02:22:09] 2025-06-05 06:21:54,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:22:09] 2025-06-05 06:21:54,615 | INFO     | job 6668789411 has completed (purged errors)
[2025-06-05 02:22:09] 2025-06-05 06:21:54,616 | INFO     | overall cleanup function is called
[2025-06-05 02:22:09] 2025-06-05 06:21:55,628 | INFO     | --- collectZombieJob: --- 10, [134682]
[2025-06-05 02:22:09] 2025-06-05 06:21:55,628 | INFO     | zombie collector waiting for pid 134682
[2025-06-05 02:22:09] 2025-06-05 06:21:55,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:22:09] 2025-06-05 06:21:55,628 | INFO     | collected zombie processes
[2025-06-05 02:22:09] 2025-06-05 06:21:55,628 | INFO     | will attempt to kill all subprocesses of pid=134682
[2025-06-05 02:22:09] 2025-06-05 06:21:56,187 | INFO     | process IDs to be killed: [134682] (in reverse order)
[2025-06-05 02:22:09] 2025-06-05 06:21:56,308 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:22:09] 2025-06-05 06:21:56,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:22:09] 2025-06-05 06:21:56,327 | INFO     | did not find any defunct processes belonging to 134682
[2025-06-05 02:22:09] 2025-06-05 06:21:56,350 | INFO     | did not find any defunct processes belonging to 134682
[2025-06-05 02:22:09] 2025-06-05 06:21:56,350 | INFO     | ready for new job
[2025-06-05 02:22:09] 2025-06-05 06:21:56,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:22:09] 2025-06-05 06:21:56,352 | INFO     | **************************************
[2025-06-05 02:22:09] 2025-06-05 06:21:56,352 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:22:09] 2025-06-05 06:21:56,352 | INFO     | **************************************
[2025-06-05 02:22:09] 2025-06-05 06:21:56,352 | INFO     | 
[2025-06-05 02:22:09] 2025-06-05 06:21:56,368 | INFO     | architecture information:
[2025-06-05 02:22:09] 2025-06-05 06:21:56,378 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:22:09] 2025-06-05 06:21:56,528 | INFO     | cat /etc/os-release:
[2025-06-05 02:22:09] NAME="CentOS Linux"
[2025-06-05 02:22:09] VERSION="7 (Core)"
[2025-06-05 02:22:09] ID="centos"
[2025-06-05 02:22:09] ID_LIKE="rhel fedora"
[2025-06-05 02:22:09] VERSION_ID="7"
[2025-06-05 02:22:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:22:09] ANSI_COLOR="0;31"
[2025-06-05 02:22:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:22:09] HOME_URL="https://www.centos.org/"
[2025-06-05 02:22:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:22:09] 
[2025-06-05 02:22:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:22:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:22:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:22:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:22:09] 
[2025-06-05 02:22:09] 2025-06-05 06:21:56,528 | INFO     | **************************************
[2025-06-05 02:22:09] 2025-06-05 06:21:57,047 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 02:22:09] 2025-06-05 06:21:57,215 | INFO     | sufficient remaining disk space (106015227904 B)
[2025-06-05 02:22:09] 2025-06-05 06:21:57,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:22:09] 2025-06-05 06:21:57,219 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:22:09] 2025-06-05 06:21:57,219 | INFO     | update_server=False
[2025-06-05 02:22:09] 2025-06-05 06:21:57,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:22:09] 2025-06-05 06:21:57,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:22:09] 2025-06-05 06:21:57,220 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:22:09] 2025-06-05 06:21:57,220 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:22:09] 2025-06-05 06:21:57,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:22:09] 2025-06-05 06:21:57,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:22:09] 2025-06-05 06:21:57,255 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 02:22:09] 2025-06-05 06:21:57,255 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 02:22:09] 2025-06-05 06:21:57,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:22:09] 2025-06-05 06:21:57,256 | INFO     | will abort loop
[2025-06-05 02:22:09] 2025-06-05 06:21:57,282 | INFO     | all job control threads have been joined
[2025-06-05 02:22:09] 2025-06-05 06:21:57,464 | INFO     | all data control threads have been joined
[2025-06-05 02:22:09] 2025-06-05 06:21:57,724 | INFO     | all payload control threads have been joined
[2025-06-05 02:22:09] 2025-06-05 06:21:58,225 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:58,261 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:58,271 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:58,288 | INFO     | [job] control thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:58,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:22:09] 2025-06-05 06:21:58,470 | INFO     | [data] control thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:58,564 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:58,730 | INFO     | [payload] control thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:58,851 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:58,855 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:59,056 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:59,108 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:59,357 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:21:59,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:22:09] 2025-06-05 06:21:59,600 | INFO     | [job] validate thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:22:00,358 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:22:00,378 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:22:01,229 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:22:09] 2025-06-05 06:22:02,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723455657792)>', '<ExcThread(monitor, started 139722265458432)>']
[2025-06-05 02:22:09] 2025-06-05 06:22:02,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:22:09] 2025-06-05 06:22:02,257 | INFO     | [monitor] control thread has ended
[2025-06-05 02:22:09] 2025-06-05 06:22:07,067 | INFO     | all workflow threads have been joined
[2025-06-05 02:22:09] 2025-06-05 06:22:07,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:22:09] 2025-06-05 06:22:07,067 | INFO     | traces error code: 0
[2025-06-05 02:22:09] 2025-06-05 06:22:07,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:22:09] 2025-06-05 06:22:07,393 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:22:09] 2025-06-05 06:22:07,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:22:09] 2025-06-05 06:22:07,452 [wrapper] pilotpid: 124752
[2025-06-05 02:22:09] 2025-06-05 06:22:07,466 [wrapper] Pilot exit status: 0
[2025-06-05 02:22:09] 2025-06-05 06:22:07,580 [wrapper] pandaids: 6668789411
[2025-06-05 02:22:09] 2025-06-05 06:22:07,905 [wrapper] cleanup supervisor_pilot  45483 124753
[2025-06-05 02:22:09] 2025-06-05 06:22:07,963 [wrapper] Test setup, not cleaning
[2025-06-05 02:22:09] 2025-06-05 06:22:08,026 [wrapper] apfmon messages muted
[2025-06-05 02:22:09] 2025-06-05 06:22:08,070 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:22:09] 2025-06-05 06:22:08,110 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:22:09]  *** Error codes and diagnostics ***
[2025-06-05 02:22:09]     "exeErrorCode": 0,
[2025-06-05 02:22:09]     "exeErrorDiag": "",
[2025-06-05 02:22:09]     "pilotErrorCode": 0,
[2025-06-05 02:22:09]     "pilotErrorDiag": "",
[2025-06-05 02:22:09]  *** Listing of results directory ***
[2025-06-05 02:22:09] total 413804
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas    495897 May 28 15:04 pilot3.tar.gz
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas      5111 May 28 15:04 queuedata.json
[2025-06-05 02:22:09] -rwx------ 1 boincer umatlas     37140 May 28 15:04 runpilot2-wrapper.sh
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas       100 Jun  4 22:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:22:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 22:36 run_atlas
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas       105 Jun  4 22:36 job.xml
[2025-06-05 02:22:09] -rw-r--r-- 2 boincer umatlas 225734719 Jun  4 22:36 EVNT.44871834._003470.pool.root.1
[2025-06-05 02:22:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 22:36 start_atlas.sh
[2025-06-05 02:22:09] drwxrwx--x 2 boincer umatlas      4096 Jun  4 22:36 shared
[2025-06-05 02:22:09] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 22:36 input.tar.gz
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas         0 Jun  4 22:36 boinc_lockfile
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 22:36 pandaJob.out
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas    987109 Jun  4 22:37 agis_schedconf.cvmfs.json
[2025-06-05 02:22:09] drwx------ 4 boincer umatlas      4096 Jun  4 22:38 pilot3
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas 191094645 Jun  5 02:19 HITS.44871837._089109.pool.root.1
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas       531 Jun  5 02:19 boinc_task_state.xml
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas      6300 Jun  5 02:20 init_data.xml
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas      1069 Jun  5 02:20 memory_monitor_summary.json
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas   1598969 Jun  5 02:21 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas    372251 Jun  5 02:21 log.44871837._089109.job.log.tgz.1
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas        95 Jun  5 02:21 pilot_heartbeat.json
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas      7769 Jun  5 02:21 heartbeat.json
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:21 boinc_mmap_file
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas        28 Jun  5 02:21 wrapper_checkpoint.txt
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas      4663 Jun  5 02:22 pilotlog.txt
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas   1168616 Jun  5 02:22 log.44871837._089109.job.log.1
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas       357 Jun  5 02:22 output.list
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:22 runtime_log
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas   1556480 Jun  5 02:22 result.tar.gz
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 02:22 runtime_log.err
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas       664 Jun  5 02:22 8I0MDmBGbe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmp0TKDmy8gkfn.diag
[2025-06-05 02:22:09] -rw-r--r-- 1 boincer umatlas     20948 Jun  5 02:22 stderr.txt
[2025-06-05 02:22:09] HITS file was successfully produced:
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas 191094645 Jun  5 02:19 shared/HITS.pool.root.1
[2025-06-05 02:22:09]  *** Contents of shared directory: ***
[2025-06-05 02:22:09] total 409104
[2025-06-05 02:22:09] -rw-r--r-- 2 boincer umatlas 225734719 Jun  4 22:36 ATLAS.root_0
[2025-06-05 02:22:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 22:36 start_atlas.sh
[2025-06-05 02:22:09] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 22:36 input.tar.gz
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas 191094645 Jun  5 02:19 HITS.pool.root.1
[2025-06-05 02:22:09] -rw------- 1 boincer umatlas   1556480 Jun  5 02:22 result.tar.gz
02:22:11 (120646): run_atlas exited; CPU time 55275.390317
02:22:11 (120646): called boinc_finish(0)

</stderr_txt>
]]>

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