Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:20:01 (7556): wrapper (7.7.26015): starting
22:20:01 (7556): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:20:01] Arguments: --nthreads 8
[2025-06-04 22:20:01] Threads: 8
[2025-06-04 22:20:01] Checking for CVMFS
[2025-06-04 22:20:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:20:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:20:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:20:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:20:02] 2.11.2.0 5085 29614 297600 146802 1 61 15426598 18432000 12612 130560 0 101656500 99.481 102425290 34996 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 22:20:02] CVMFS is ok
[2025-06-04 22:20:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:20:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:20:02] Further information can be found at the LHC@home message board.
[2025-06-04 22:20:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:20:02] Checking for apptainer binary...
[2025-06-04 22:20:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:20:02] Running /usr/bin/apptainer --version
[2025-06-04 22:20:02] apptainer version 1.3.2-1.el7
[2025-06-04 22:20:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:20:04] c-211-39.aglt2.org
[2025-06-04 22:20:04] apptainer works
[2025-06-04 22:20:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:20:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:20:05] Starting ATLAS job with PandaID=6668688315
[2025-06-04 22:20:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:56:44]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:56:44] 2025-06-05 06:56:28,865 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:56:44] 2025-06-05 06:56:28,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:56:44] 2025-06-05 06:56:28,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:56:44] 2025-06-05 06:56:28,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:56:44] 2025-06-05 06:56:28,869 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:56:44] 2025-06-05 06:56:28,869 | INFO     | sum of square deviations: 5968717251.611932
[2025-06-05 02:56:44] 2025-06-05 06:56:28,871 | INFO     | sum of deviations: 49136513450.462685
[2025-06-05 02:56:44] 2025-06-05 06:56:28,871 | INFO     | mean x: 1749098359.641791
[2025-06-05 02:56:44] 2025-06-05 06:56:28,871 | INFO     | mean y: 2485176.869402985
[2025-06-05 02:56:44] 2025-06-05 06:56:28,871 | INFO     | -- intersect: -14396688289.005629
[2025-06-05 02:56:44] 2025-06-05 06:56:28,871 | INFO     | intersect: -14396688289.005629
[2025-06-05 02:56:44] 2025-06-05 06:56:28,872 | INFO     | chi2: 2.481271427717179
[2025-06-05 02:56:44] 2025-06-05 06:56:28,872 | INFO     | sum of square deviations: 5640852926.509502
[2025-06-05 02:56:44] 2025-06-05 06:56:28,873 | INFO     | sum of deviations: 47931797159.22815
[2025-06-05 02:56:44] 2025-06-05 06:56:28,874 | INFO     | mean x: 1749098207.1444867
[2025-06-05 02:56:44] 2025-06-05 06:56:28,874 | INFO     | mean y: 2484616.4676806084
[2025-06-05 02:56:44] 2025-06-05 06:56:28,874 | INFO     | -- intersect: -14860058613.904545
[2025-06-05 02:56:44] 2025-06-05 06:56:28,874 | INFO     | intersect: -14860058613.904545
[2025-06-05 02:56:44] 2025-06-05 06:56:28,874 | INFO     | chi2: 2.482806971393947
[2025-06-05 02:56:44] 2025-06-05 06:56:28,874 | INFO     | current chi2=2.482806971393947 (change=-0.06188535682212107 %)
[2025-06-05 02:56:44] 2025-06-05 06:56:28,874 | INFO     | right removable region: 262
[2025-06-05 02:56:44] 2025-06-05 06:56:28,874 | INFO     | sum of square deviations: 5640829746.509501
[2025-06-05 02:56:44] 2025-06-05 06:56:28,876 | INFO     | sum of deviations: -13611998955.882135
[2025-06-05 02:56:44] 2025-06-05 06:56:28,876 | INFO     | mean x: 1749098512.1444867
[2025-06-05 02:56:44] 2025-06-05 06:56:28,876 | INFO     | mean y: 2514221.391634981
[2025-06-05 02:56:44] 2025-06-05 06:56:28,876 | INFO     | -- intersect: 4223298785.183583
[2025-06-05 02:56:44] 2025-06-05 06:56:28,876 | INFO     | intersect: 4223298785.183583
[2025-06-05 02:56:44] 2025-06-05 06:56:28,877 | INFO     | chi2: 0.064047183826235
[2025-06-05 02:56:44] 2025-06-05 06:56:28,877 | INFO     | current chi2=0.064047183826235 (change=97.41877558775744 %)
[2025-06-05 02:56:44] 2025-06-05 06:56:28,877 | INFO     | sum of square deviations: 5325175028.903071
[2025-06-05 02:56:44] 2025-06-05 06:56:28,878 | INFO     | sum of deviations: -16952643591.519375
[2025-06-05 02:56:44] 2025-06-05 06:56:28,879 | INFO     | mean x: 1749098664.647287
[2025-06-05 02:56:44] 2025-06-05 06:56:28,879 | INFO     | mean y: 2515802.8294573645
[2025-06-05 02:56:44] 2025-06-05 06:56:28,879 | INFO     | -- intersect: 5570754613.240143
[2025-06-05 02:56:44] 2025-06-05 06:56:28,879 | INFO     | intersect: 5570754613.240143
[2025-06-05 02:56:44] 2025-06-05 06:56:28,879 | INFO     | chi2: 0.03281680552639456
[2025-06-05 02:56:44] 2025-06-05 06:56:28,879 | INFO     | current chi2=0.03281680552639456 (change=48.76151679763297 %)
[2025-06-05 02:56:44] 2025-06-05 06:56:28,880 | INFO     | sum of square deviations: 5021520536.292458
[2025-06-05 02:56:44] 2025-06-05 06:56:28,881 | INFO     | sum of deviations: -13670893216.27273
[2025-06-05 02:56:44] 2025-06-05 06:56:28,881 | INFO     | mean x: 1749098817.1501977
[2025-06-05 02:56:44] 2025-06-05 06:56:28,881 | INFO     | mean y: 2514153.4545454546
[2025-06-05 02:56:44] 2025-06-05 06:56:28,881 | INFO     | -- intersect: 4764367257.738385
[2025-06-05 02:56:44] 2025-06-05 06:56:28,881 | INFO     | intersect: 4764367257.738385
[2025-06-05 02:56:44] 2025-06-05 06:56:28,881 | INFO     | chi2: 0.029927671671873293
[2025-06-05 02:56:44] 2025-06-05 06:56:28,882 | INFO     | current chi2=0.029927671671873293 (change=8.803824163194477 %)
[2025-06-05 02:56:44] 2025-06-05 06:56:28,882 | INFO     | left removable region: 30
[2025-06-05 02:56:44] 2025-06-05 06:56:28,882 | INFO     | sum of square deviations: 3872008658.0991373
[2025-06-05 02:56:44] 2025-06-05 06:56:28,883 | INFO     | sum of deviations: -4847556213.633621
[2025-06-05 02:56:44] 2025-06-05 06:56:28,883 | INFO     | mean x: 1749099091.6594827
[2025-06-05 02:56:44] 2025-06-05 06:56:28,883 | INFO     | mean y: 2509107.2198275863
[2025-06-05 02:56:44] 2025-06-05 06:56:28,883 | INFO     | -- intersect: 2192291444.689425
[2025-06-05 02:56:44] 2025-06-05 06:56:28,884 | INFO     | intersect: 2192291444.689425
[2025-06-05 02:56:44] 2025-06-05 06:56:28,884 | INFO     | chi2: 0.019410678056183964
[2025-06-05 02:56:44] 2025-06-05 06:56:28,884 | INFO     | -- intersect: 2192291444.689425
[2025-06-05 02:56:44] 2025-06-05 06:56:28,884 | INFO     | current memory leak: -1.25 B/s (using 232 data points, chi2=0.02)
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | ..............................
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | . Timing measurements:
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | . get job = 0 s
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | . initial setup = 3 s
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | . payload setup = 54 s
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | . stage-in = 0 s
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | . payload execution = 16372 s
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | . stage-out = 2 s
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | . log creation = 0 s
[2025-06-05 02:56:44] 2025-06-05 06:56:28,885 | INFO     | ..............................
[2025-06-05 02:56:44] 2025-06-05 06:56:29,001 | INFO     | 
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | job summary report
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | --------------------------------------------------
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | PanDA job id: 6668688315
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | task id: 44871837
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | errors: (none)
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | pilot state: finished 
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | transexitcode: 0
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | exeerrorcode: 0
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | exeerrordiag: 
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | exitcode: 0
[2025-06-05 02:56:44] 2025-06-05 06:56:29,002 | INFO     | exitmsg: OK
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | cpuconsumptiontime: 44197 s
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | nevents: 400
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | neventsw: 0
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | pid: 29983
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | pgrp: 29983
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | corecount: 8
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | event service: False
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | sizes: {0: 2396563, 1: 2397248, 2: 2397447, 13: 2397447, 24: 2397503, 34: 2397531, 36: 2397893, 45: 2397921, 16430: 2429397, 16434: 2438338, 16435: 2438394, 16468:
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | --------------------------------------------------
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | 
[2025-06-05 02:56:44] 2025-06-05 06:56:29,003 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 02:56:44] 2025-06-05 06:56:29,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,270 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:56:44] 2025-06-05 06:56:29,271 | INFO     | job 6668688315 has completed (purged errors)
[2025-06-05 02:56:44] 2025-06-05 06:56:29,271 | INFO     | overall cleanup function is called
[2025-06-05 02:56:44] 2025-06-05 06:56:30,283 | INFO     | --- collectZombieJob: --- 10, [29983]
[2025-06-05 02:56:44] 2025-06-05 06:56:30,283 | INFO     | zombie collector waiting for pid 29983
[2025-06-05 02:56:44] 2025-06-05 06:56:30,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:56:44] 2025-06-05 06:56:30,283 | INFO     | collected zombie processes
[2025-06-05 02:56:44] 2025-06-05 06:56:30,283 | INFO     | will attempt to kill all subprocesses of pid=29983
[2025-06-05 02:56:44] 2025-06-05 06:56:30,499 | INFO     | process IDs to be killed: [29983] (in reverse order)
[2025-06-05 02:56:44] 2025-06-05 06:56:30,586 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:56:44] 2025-06-05 06:56:30,586 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:56:44] 2025-06-05 06:56:30,593 | INFO     | did not find any defunct processes belonging to 29983
[2025-06-05 02:56:44] 2025-06-05 06:56:30,598 | INFO     | did not find any defunct processes belonging to 29983
[2025-06-05 02:56:44] 2025-06-05 06:56:30,598 | INFO     | ready for new job
[2025-06-05 02:56:44] 2025-06-05 06:56:30,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:56:44] 2025-06-05 06:56:30,601 | INFO     | **************************************
[2025-06-05 02:56:44] 2025-06-05 06:56:30,601 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:56:44] 2025-06-05 06:56:30,601 | INFO     | **************************************
[2025-06-05 02:56:44] 2025-06-05 06:56:30,601 | INFO     | 
[2025-06-05 02:56:44] 2025-06-05 06:56:30,604 | INFO     | architecture information:
[2025-06-05 02:56:44] 2025-06-05 06:56:30,605 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:56:44] 2025-06-05 06:56:30,697 | INFO     | cat /etc/os-release:
[2025-06-05 02:56:44] NAME="CentOS Linux"
[2025-06-05 02:56:44] VERSION="7 (Core)"
[2025-06-05 02:56:44] ID="centos"
[2025-06-05 02:56:44] ID_LIKE="rhel fedora"
[2025-06-05 02:56:44] VERSION_ID="7"
[2025-06-05 02:56:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:56:44] ANSI_COLOR="0;31"
[2025-06-05 02:56:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:56:44] HOME_URL="https://www.centos.org/"
[2025-06-05 02:56:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:56:44] 
[2025-06-05 02:56:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:56:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:56:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:56:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:56:44] 
[2025-06-05 02:56:44] 2025-06-05 06:56:30,697 | INFO     | **************************************
[2025-06-05 02:56:44] 2025-06-05 06:56:31,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 02:56:44] 2025-06-05 06:56:31,273 | INFO     | PID=14941 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 02:56:44] 2025-06-05 06:56:31,274 | INFO     | .. there are 11 such processes running
[2025-06-05 02:56:44] 2025-06-05 06:56:31,293 | INFO     | sufficient remaining disk space (75502714880 B)
[2025-06-05 02:56:44] 2025-06-05 06:56:31,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:56:44] 2025-06-05 06:56:31,293 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:56:44] 2025-06-05 06:56:31,294 | INFO     | update_server=False
[2025-06-05 02:56:44] 2025-06-05 06:56:31,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:56:44] 2025-06-05 06:56:31,294 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:56:44] 2025-06-05 06:56:31,294 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:56:44] 2025-06-05 06:56:31,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:56:44] 2025-06-05 06:56:31,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:56:44] 2025-06-05 06:56:31,928 | INFO     | all payload control threads have been joined
[2025-06-05 02:56:44] 2025-06-05 06:56:32,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:56:44] 2025-06-05 06:56:32,157 | INFO     | aborting loop
[2025-06-05 02:56:44] 2025-06-05 06:56:32,299 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:32,333 | INFO     | all data control threads have been joined
[2025-06-05 02:56:44] 2025-06-05 06:56:32,506 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:32,562 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:32,597 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:32,745 | INFO     | all job control threads have been joined
[2025-06-05 02:56:44] 2025-06-05 06:56:32,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:56:44] 2025-06-05 06:56:32,935 | INFO     | [payload] control thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:33,131 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:33,162 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:33,334 | INFO     | [data] control thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:33,591 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:33,623 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:33,710 | INFO     | [job] validate thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:33,752 | INFO     | [job] control thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:33,836 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:34,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:56:44] 2025-06-05 06:56:34,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:56:44] 2025-06-05 06:56:34,789 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:35,020 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:38,013 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:56:44] 2025-06-05 06:56:38,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051306792768)>', '<ExcThread(monitor, started 140050855601920)>']
[2025-06-05 02:56:44] 2025-06-05 06:56:38,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:56:44] 2025-06-05 06:56:38,330 | INFO     | [monitor] control thread has ended
[2025-06-05 02:56:44] 2025-06-05 06:56:43,038 | INFO     | all workflow threads have been joined
[2025-06-05 02:56:44] 2025-06-05 06:56:43,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:56:44] 2025-06-05 06:56:43,039 | INFO     | traces error code: 0
[2025-06-05 02:56:44] 2025-06-05 06:56:43,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:56:44] 2025-06-05 06:56:43,190 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:56:44] 2025-06-05 06:56:43,204 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:56:44] 2025-06-05 06:56:43,219 [wrapper] pilotpid: 14941
[2025-06-05 02:56:44] 2025-06-05 06:56:43,227 [wrapper] Pilot exit status: 0
[2025-06-05 02:56:44] 2025-06-05 06:56:43,317 [wrapper] pandaids: 6668688315
[2025-06-05 02:56:44] 2025-06-05 06:56:43,467 [wrapper] cleanup supervisor_pilot 58570 14942
[2025-06-05 02:56:44] 2025-06-05 06:56:43,499 [wrapper] Test setup, not cleaning
[2025-06-05 02:56:44] 2025-06-05 06:56:43,526 [wrapper] apfmon messages muted
[2025-06-05 02:56:44] 2025-06-05 06:56:43,560 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:56:44] 2025-06-05 06:56:43,599 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:56:44]  *** Error codes and diagnostics ***
[2025-06-05 02:56:44]     "exeErrorCode": 0,
[2025-06-05 02:56:44]     "exeErrorDiag": "",
[2025-06-05 02:56:44]     "pilotErrorCode": 0,
[2025-06-05 02:56:44]     "pilotErrorDiag": "",
[2025-06-05 02:56:44]  *** Listing of results directory ***
[2025-06-05 02:56:44] total 410864
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas    495897 May 28 12:21 pilot3.tar.gz
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas      5111 May 28 12:26 queuedata.json
[2025-06-05 02:56:44] -rwx------ 1 boincer umatlas     37140 May 28 12:27 runpilot2-wrapper.sh
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas       100 Jun  4 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:56:44] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 22:20 run_atlas
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas       105 Jun  4 22:20 job.xml
[2025-06-05 02:56:44] -rw-r--r-- 2 boincer umatlas 222130299 Jun  4 22:20 EVNT.44871834._003389.pool.root.1
[2025-06-05 02:56:44] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 22:20 start_atlas.sh
[2025-06-05 02:56:44] drwxrwx--x 2 boincer umatlas      4096 Jun  4 22:20 shared
[2025-06-05 02:56:44] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 22:20 input.tar.gz
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas         0 Jun  4 22:20 boinc_lockfile
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 22:20 pandaJob.out
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas    987109 Jun  4 22:20 agis_schedconf.cvmfs.json
[2025-06-05 02:56:44] drwx------ 4 boincer umatlas      4096 Jun  4 22:20 pilot3
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas      6336 Jun  5 02:54 init_data.xml
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas 191115199 Jun  5 02:55 HITS.44871837._087003.pool.root.1
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas       531 Jun  5 02:55 boinc_task_state.xml
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas      1074 Jun  5 02:55 memory_monitor_summary.json
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas   1598969 Jun  5 02:55 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas    402645 Jun  5 02:55 log.44871837._087003.job.log.tgz.1
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas        95 Jun  5 02:56 pilot_heartbeat.json
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas      7746 Jun  5 02:56 heartbeat.json
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:56 boinc_mmap_file
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas        28 Jun  5 02:56 wrapper_checkpoint.txt
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas      4869 Jun  5 02:56 pilotlog.txt
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas   1422988 Jun  5 02:56 log.44871837._087003.job.log.1
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas       357 Jun  5 02:56 output.list
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:56 runtime_log
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas   1843200 Jun  5 02:56 result.tar.gz
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas       664 Jun  5 02:56 zzrNDmGoYe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfkTKDmc8XfEm.diag
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 02:56 runtime_log.err
[2025-06-05 02:56:44] -rw-r--r-- 1 boincer umatlas     21026 Jun  5 02:56 stderr.txt
[2025-06-05 02:56:44] HITS file was successfully produced:
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas 191115199 Jun  5 02:55 shared/HITS.pool.root.1
[2025-06-05 02:56:44]  *** Contents of shared directory: ***
[2025-06-05 02:56:44] total 405884
[2025-06-05 02:56:44] -rw-r--r-- 2 boincer umatlas 222130299 Jun  4 22:20 ATLAS.root_0
[2025-06-05 02:56:44] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 22:20 start_atlas.sh
[2025-06-05 02:56:44] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 22:20 input.tar.gz
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas 191115199 Jun  5 02:55 HITS.pool.root.1
[2025-06-05 02:56:44] -rw------- 1 boincer umatlas   1843200 Jun  5 02:56 result.tar.gz
02:56:46 (7556): run_atlas exited; CPU time 43562.225293
02:56:46 (7556): called boinc_finish(0)

</stderr_txt>
]]>

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