Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:34 (6203): wrapper (7.7.26015): starting
22:19:34 (6203): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:19:34] Arguments: --nthreads 8
[2025-06-04 22:19:34] Threads: 8
[2025-06-04 22:19:34] Checking for CVMFS
[2025-06-04 22:19:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:19:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:19:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:19:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:19:35] 2.11.2.0 5085 29614 297332 146802 2 57 15426572 18432000 12586 130560 0 101650023 99.481 102425290 34996 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 22:19:35] CVMFS is ok
[2025-06-04 22:19:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:19:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:19:35] Further information can be found at the LHC@home message board.
[2025-06-04 22:19:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:19:35] Checking for apptainer binary...
[2025-06-04 22:19:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:19:35] Running /usr/bin/apptainer --version
[2025-06-04 22:19:36] apptainer version 1.3.2-1.el7
[2025-06-04 22:19:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:19:40] c-211-39.aglt2.org
[2025-06-04 22:19:40] apptainer works
[2025-06-04 22:19:41] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:19:41] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:19:41] Starting ATLAS job with PandaID=6668440513
[2025-06-04 22:19:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:58:58]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:58:58] 2025-06-05 06:58:37,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:58:58] 2025-06-05 06:58:40,198 | INFO     | monitor loop #1145: job 0:6668440513 is in state 'finished'
[2025-06-05 02:58:58] 2025-06-05 06:58:40,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:58:58] 2025-06-05 06:58:42,704 | INFO     | monitor loop #1146: job 0:6668440513 is in state 'finished'
[2025-06-05 02:58:58] 2025-06-05 06:58:42,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,692 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 02:58:58] 2025-06-05 06:58:44,692 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668440513/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,693 | INFO     | extracted standard info from prmon json
[2025-06-05 02:58:58] 2025-06-05 06:58:44,693 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:58:58] 2025-06-05 06:58:44,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:58:58] 2025-06-05 06:58:44,694 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:58:58] 2025-06-05 06:58:44,694 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:58:58] 2025-06-05 06:58:44,699 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:58:58] 2025-06-05 06:58:44,699 | INFO     | sum of square deviations: 6171324798.848688
[2025-06-05 02:58:58] 2025-06-05 06:58:44,702 | INFO     | sum of deviations: 40434139643.79709
[2025-06-05 02:58:58] 2025-06-05 06:58:44,702 | INFO     | mean x: 1749098435.1734316
[2025-06-05 02:58:58] 2025-06-05 06:58:44,702 | INFO     | mean y: 2467956.110701107
[2025-06-05 02:58:58] 2025-06-05 06:58:44,702 | INFO     | -- intersect: -11457517166.00498
[2025-06-05 02:58:58] 2025-06-05 06:58:44,702 | INFO     | intersect: -11457517166.00498
[2025-06-05 02:58:58] 2025-06-05 06:58:44,702 | INFO     | chi2: 3.6126042727470766
[2025-06-05 02:58:58] 2025-06-05 06:58:44,704 | INFO     | sum of square deviations: 5836011916.195529
[2025-06-05 02:58:58] 2025-06-05 06:58:44,706 | INFO     | sum of deviations: 57982503330.06769
[2025-06-05 02:58:58] 2025-06-05 06:58:44,706 | INFO     | mean x: 1749098282.6766918
[2025-06-05 02:58:58] 2025-06-05 06:58:44,706 | INFO     | mean y: 2475811.84962406
[2025-06-05 02:58:58] 2025-06-05 06:58:44,706 | INFO     | -- intersect: -17375332605.311787
[2025-06-05 02:58:58] 2025-06-05 06:58:44,706 | INFO     | intersect: -17375332605.311787
[2025-06-05 02:58:58] 2025-06-05 06:58:44,706 | INFO     | chi2: 2.812822905348009
[2025-06-05 02:58:58] 2025-06-05 06:58:44,706 | INFO     | current chi2=2.812822905348009 (change=22.13863758708623 %)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,706 | INFO     | right removable region: 265
[2025-06-05 02:58:58] 2025-06-05 06:58:44,707 | INFO     | sum of square deviations: 5835983246.195527
[2025-06-05 02:58:58] 2025-06-05 06:58:44,709 | INFO     | sum of deviations: -27794683736.015045
[2025-06-05 02:58:58] 2025-06-05 06:58:44,709 | INFO     | mean x: 1749098587.6766918
[2025-06-05 02:58:58] 2025-06-05 06:58:44,709 | INFO     | mean y: 2498856.2556390977
[2025-06-05 02:58:58] 2025-06-05 06:58:44,709 | INFO     | -- intersect: 8332824701.3952265
[2025-06-05 02:58:58] 2025-06-05 06:58:44,709 | INFO     | intersect: 8332824701.3952265
[2025-06-05 02:58:58] 2025-06-05 06:58:44,709 | INFO     | chi2: 0.9162896504314912
[2025-06-05 02:58:58] 2025-06-05 06:58:44,710 | INFO     | current chi2=0.9162896504314912 (change=74.63631271922482 %)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,710 | INFO     | sum of square deviations: 5513014018.53644
[2025-06-05 02:58:58] 2025-06-05 06:58:44,712 | INFO     | sum of deviations: -34778113478.122604
[2025-06-05 02:58:58] 2025-06-05 06:58:44,713 | INFO     | mean x: 1749098740.1800766
[2025-06-05 02:58:58] 2025-06-05 06:58:44,713 | INFO     | mean y: 2502120.1302681994
[2025-06-05 02:58:58] 2025-06-05 06:58:44,713 | INFO     | -- intersect: 11036458185.885538
[2025-06-05 02:58:58] 2025-06-05 06:58:44,713 | INFO     | intersect: 11036458185.885538
[2025-06-05 02:58:58] 2025-06-05 06:58:44,713 | INFO     | chi2: 0.8619847237815914
[2025-06-05 02:58:58] 2025-06-05 06:58:44,713 | INFO     | current chi2=0.8619847237815914 (change=5.926611374943177 %)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,713 | INFO     | left removable region: 20
[2025-06-05 02:58:58] 2025-06-05 06:58:44,714 | INFO     | sum of square deviations: 4559980029.983666
[2025-06-05 02:58:58] 2025-06-05 06:58:44,716 | INFO     | sum of deviations: -10353024806.881632
[2025-06-05 02:58:58] 2025-06-05 06:58:44,716 | INFO     | mean x: 1749098862.1918368
[2025-06-05 02:58:58] 2025-06-05 06:58:44,716 | INFO     | mean y: 2507775.3591836733
[2025-06-05 02:58:58] 2025-06-05 06:58:44,716 | INFO     | -- intersect: 3973679532.8866806
[2025-06-05 02:58:58] 2025-06-05 06:58:44,716 | INFO     | intersect: 3973679532.8866806
[2025-06-05 02:58:58] 2025-06-05 06:58:44,716 | INFO     | chi2: 0.023837262804763632
[2025-06-05 02:58:58] 2025-06-05 06:58:44,716 | INFO     | -- intersect: 3973679532.8866806
[2025-06-05 02:58:58] 2025-06-05 06:58:44,717 | INFO     | current memory leak: -2.27 B/s (using 245 data points, chi2=0.02)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,718 | INFO     | ..............................
[2025-06-05 02:58:58] 2025-06-05 06:58:44,718 | INFO     | . Timing measurements:
[2025-06-05 02:58:58] 2025-06-05 06:58:44,718 | INFO     | . get job = 0 s
[2025-06-05 02:58:58] 2025-06-05 06:58:44,718 | INFO     | . initial setup = 4 s
[2025-06-05 02:58:58] 2025-06-05 06:58:44,718 | INFO     | . payload setup = 53 s
[2025-06-05 02:58:58] 2025-06-05 06:58:44,719 | INFO     | . stage-in = 0 s
[2025-06-05 02:58:58] 2025-06-05 06:58:44,719 | INFO     | . payload execution = 16523 s
[2025-06-05 02:58:58] 2025-06-05 06:58:44,719 | INFO     | . stage-out = 3 s
[2025-06-05 02:58:58] 2025-06-05 06:58:44,719 | INFO     | . log creation = 0 s
[2025-06-05 02:58:58] 2025-06-05 06:58:44,719 | INFO     | ..............................
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | 
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | job summary report
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | --------------------------------------------------
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | PanDA job id: 6668440513
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | task id: 44871837
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | errors: (none)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | pilot state: finished 
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | transexitcode: 0
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | exeerrorcode: 0
[2025-06-05 02:58:58] 2025-06-05 06:58:44,947 | INFO     | exeerrordiag: 
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | exitcode: 0
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | exitmsg: OK
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | cpuconsumptiontime: 44881 s
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | nevents: 400
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | neventsw: 0
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | pid: 26454
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | pgrp: 26454
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | corecount: 8
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | event service: False
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | sizes: {0: 2396564, 1: 2397420, 2: 2397420, 12: 2397448, 23: 2397476, 29: 2397710, 34: 2397866, 16580: 2429471, 16581: 2429470, 16585: 2438467, 16586: 2438523, 166
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | --------------------------------------------------
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | 
[2025-06-05 02:58:58] 2025-06-05 06:58:44,948 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 02:58:58] 2025-06-05 06:58:44,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,986 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,986 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,986 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,987 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:58:58] 2025-06-05 06:58:44,988 | INFO     | job 6668440513 has completed (purged errors)
[2025-06-05 02:58:58] 2025-06-05 06:58:44,988 | INFO     | overall cleanup function is called
[2025-06-05 02:58:58] 2025-06-05 06:58:45,996 | INFO     | --- collectZombieJob: --- 10, [26454]
[2025-06-05 02:58:58] 2025-06-05 06:58:45,996 | INFO     | zombie collector waiting for pid 26454
[2025-06-05 02:58:58] 2025-06-05 06:58:45,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:58:58] 2025-06-05 06:58:45,996 | INFO     | collected zombie processes
[2025-06-05 02:58:58] 2025-06-05 06:58:45,996 | INFO     | will attempt to kill all subprocesses of pid=26454
[2025-06-05 02:58:58] 2025-06-05 06:58:46,387 | INFO     | process IDs to be killed: [26454] (in reverse order)
[2025-06-05 02:58:58] 2025-06-05 06:58:46,593 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:58:58] 2025-06-05 06:58:46,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:58:58] 2025-06-05 06:58:46,600 | INFO     | did not find any defunct processes belonging to 26454
[2025-06-05 02:58:58] 2025-06-05 06:58:46,604 | INFO     | did not find any defunct processes belonging to 26454
[2025-06-05 02:58:58] 2025-06-05 06:58:46,604 | INFO     | ready for new job
[2025-06-05 02:58:58] 2025-06-05 06:58:46,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:58:58] 2025-06-05 06:58:46,607 | INFO     | **************************************
[2025-06-05 02:58:58] 2025-06-05 06:58:46,607 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:58:58] 2025-06-05 06:58:46,607 | INFO     | **************************************
[2025-06-05 02:58:58] 2025-06-05 06:58:46,607 | INFO     | 
[2025-06-05 02:58:58] 2025-06-05 06:58:46,610 | INFO     | architecture information:
[2025-06-05 02:58:58] 2025-06-05 06:58:46,611 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:58:58] 2025-06-05 06:58:46,733 | INFO     | cat /etc/os-release:
[2025-06-05 02:58:58] NAME="CentOS Linux"
[2025-06-05 02:58:58] VERSION="7 (Core)"
[2025-06-05 02:58:58] ID="centos"
[2025-06-05 02:58:58] ID_LIKE="rhel fedora"
[2025-06-05 02:58:58] VERSION_ID="7"
[2025-06-05 02:58:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:58:58] ANSI_COLOR="0;31"
[2025-06-05 02:58:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:58:58] HOME_URL="https://www.centos.org/"
[2025-06-05 02:58:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:58:58] 
[2025-06-05 02:58:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:58:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:58:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:58:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:58:58] 
[2025-06-05 02:58:58] 2025-06-05 06:58:46,733 | INFO     | **************************************
[2025-06-05 02:58:58] 2025-06-05 06:58:47,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 02:58:58] 2025-06-05 06:58:47,401 | INFO     | sufficient remaining disk space (75733401600 B)
[2025-06-05 02:58:58] 2025-06-05 06:58:47,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:58:58] 2025-06-05 06:58:47,402 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:58:58] 2025-06-05 06:58:47,402 | INFO     | update_server=False
[2025-06-05 02:58:58] 2025-06-05 06:58:47,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:58:58] 2025-06-05 06:58:47,402 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:58:58] 2025-06-05 06:58:47,402 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:58:58] 2025-06-05 06:58:47,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:58:58] 2025-06-05 06:58:47,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:58:58] 2025-06-05 06:58:47,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:58:58] 2025-06-05 06:58:47,748 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 02:58:58] 2025-06-05 06:58:47,748 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 02:58:58] 2025-06-05 06:58:47,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:58:58] 2025-06-05 06:58:47,748 | INFO     | will abort loop
[2025-06-05 02:58:58] 2025-06-05 06:58:47,904 | INFO     | all job control threads have been joined
[2025-06-05 02:58:58] 2025-06-05 06:58:48,408 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:48,437 | INFO     | all data control threads have been joined
[2025-06-05 02:58:58] 2025-06-05 06:58:48,457 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:48,608 | INFO     | all payload control threads have been joined
[2025-06-05 02:58:58] 2025-06-05 06:58:48,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:58:58] 2025-06-05 06:58:48,753 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:48,910 | INFO     | [job] control thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,206 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,444 | INFO     | [data] control thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,565 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,615 | INFO     | [payload] control thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,720 | INFO     | [job] validate thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,734 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,755 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,755 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,790 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:49,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:58:58] 2025-06-05 06:58:50,665 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:50,967 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:51,724 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:58:58] 2025-06-05 06:58:51,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943473686336)>', '<ExcThread(monitor, started 139943036835584)>']
[2025-06-05 02:58:58] 2025-06-05 06:58:52,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:58:58] 2025-06-05 06:58:52,451 | INFO     | [monitor] control thread has ended
[2025-06-05 02:58:58] 2025-06-05 06:58:56,831 | INFO     | all workflow threads have been joined
[2025-06-05 02:58:58] 2025-06-05 06:58:56,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:58:58] 2025-06-05 06:58:56,832 | INFO     | traces error code: 0
[2025-06-05 02:58:58] 2025-06-05 06:58:56,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:58:58] 2025-06-05 06:58:56,993 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:58:58] 2025-06-05 06:58:57,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:58:58] 2025-06-05 06:58:57,083 [wrapper] pilotpid: 12307
[2025-06-05 02:58:58] 2025-06-05 06:58:57,120 [wrapper] Pilot exit status: 0
[2025-06-05 02:58:58] 2025-06-05 06:58:57,335 [wrapper] pandaids: 6668440513
[2025-06-05 02:58:58] 2025-06-05 06:58:57,461 [wrapper] cleanup supervisor_pilot 54320 12308
[2025-06-05 02:58:58] 2025-06-05 06:58:57,499 [wrapper] Test setup, not cleaning
[2025-06-05 02:58:58] 2025-06-05 06:58:57,543 [wrapper] apfmon messages muted
[2025-06-05 02:58:58] 2025-06-05 06:58:57,616 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:58:58] 2025-06-05 06:58:57,622 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:58:58]  *** Error codes and diagnostics ***
[2025-06-05 02:58:58]     "exeErrorCode": 0,
[2025-06-05 02:58:58]     "exeErrorDiag": "",
[2025-06-05 02:58:58]     "pilotErrorCode": 0,
[2025-06-05 02:58:58]     "pilotErrorDiag": "",
[2025-06-05 02:58:58]  *** Listing of results directory ***
[2025-06-05 02:58:58] total 421500
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas    495897 May 28 07:45 pilot3.tar.gz
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas      5111 May 28 08:26 queuedata.json
[2025-06-05 02:58:58] -rwx------ 1 boincer umatlas     37140 May 28 08:27 runpilot2-wrapper.sh
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas       100 Jun  4 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:58:58] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 22:19 run_atlas
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas       105 Jun  4 22:19 job.xml
[2025-06-05 02:58:58] -rw-r--r-- 2 boincer umatlas 221692523 Jun  4 22:19 EVNT.44871834._003282.pool.root.1
[2025-06-05 02:58:58] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 22:19 start_atlas.sh
[2025-06-05 02:58:58] drwxrwx--x 2 boincer umatlas      4096 Jun  4 22:19 shared
[2025-06-05 02:58:58] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 22:19 input.tar.gz
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas         0 Jun  4 22:19 boinc_lockfile
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 22:19 pandaJob.out
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas    987109 Jun  4 22:20 agis_schedconf.cvmfs.json
[2025-06-05 02:58:58] drwx------ 4 boincer umatlas      4096 Jun  4 22:20 pilot3
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas      6336 Jun  5 02:54 init_data.xml
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas 202408112 Jun  5 02:57 HITS.44871837._084123.pool.root.1
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas       530 Jun  5 02:57 boinc_task_state.xml
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas        95 Jun  5 02:57 pilot_heartbeat.json
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas      1075 Jun  5 02:57 memory_monitor_summary.json
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas   1598969 Jun  5 02:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas    407853 Jun  5 02:58 log.44871837._084123.job.log.tgz.1
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas      7745 Jun  5 02:58 heartbeat.json
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:58 boinc_mmap_file
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas        28 Jun  5 02:58 wrapper_checkpoint.txt
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas      4662 Jun  5 02:58 pilotlog.txt
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas   1437029 Jun  5 02:58 log.44871837._084123.job.log.1
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas       357 Jun  5 02:58 output.list
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:58 runtime_log
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas   1863680 Jun  5 02:58 result.tar.gz
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 02:58 runtime_log.err
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas       664 Jun  5 02:58 AwZKDm23Ue7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA7bKDmz4fQHm.diag
[2025-06-05 02:58:58] -rw-r--r-- 1 boincer umatlas     18209 Jun  5 02:58 stderr.txt
[2025-06-05 02:58:58] HITS file was successfully produced:
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas 202408112 Jun  5 02:57 shared/HITS.pool.root.1
[2025-06-05 02:58:58]  *** Contents of shared directory: ***
[2025-06-05 02:58:58] total 416508
[2025-06-05 02:58:58] -rw-r--r-- 2 boincer umatlas 221692523 Jun  4 22:19 ATLAS.root_0
[2025-06-05 02:58:58] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 22:19 start_atlas.sh
[2025-06-05 02:58:58] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 22:19 input.tar.gz
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas 202408112 Jun  5 02:57 HITS.pool.root.1
[2025-06-05 02:58:58] -rw------- 1 boincer umatlas   1863680 Jun  5 02:58 result.tar.gz
02:58:59 (6203): run_atlas exited; CPU time 44274.841049
02:58:59 (6203): called boinc_finish(0)

</stderr_txt>
]]>

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