Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:46 (1917920): wrapper (7.7.26015): starting
22:19:46 (1917920): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:19:46] Arguments: --nthreads 8
[2025-06-04 22:19:46] Threads: 8
[2025-06-04 22:19:46] Checking for CVMFS
[2025-06-04 22:19:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:19:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:19:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:19:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:19:46] 2.12.6.0 3074763 24363 332780 146802 1 97 20976421 32935936 12673 16776704 0 61693035 99.626 63761979 10373 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:19:46] CVMFS is ok
[2025-06-04 22:19:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:19:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:19:46] Further information can be found at the LHC@home message board.
[2025-06-04 22:19:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:19:46] Checking for apptainer binary...
[2025-06-04 22:19:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:19:46] Running /usr/bin/apptainer --version
[2025-06-04 22:19:46] apptainer version 1.4.1-1.el9
[2025-06-04 22:19:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:19:47] c6-12-25-1.aglt2.org
[2025-06-04 22:19:47] apptainer works
[2025-06-04 22:19:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:19:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:19:47] Starting ATLAS job with PandaID=6667923322
[2025-06-04 22:19:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:20:06 (1917920): BOINC client no longer exists - exiting
22:20:06 (1917920): timer handler: client dead, exiting
22:27:07 (1952796): wrapper (7.7.26015): starting
22:27:07 (1952796): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:27:07] Arguments: --nthreads 8
[2025-06-04 22:27:07] Threads: 8
[2025-06-04 22:27:07] This job has been restarted, cleaning up previous attempt
[2025-06-04 22:27:07] Checking for CVMFS
[2025-06-04 22:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:27:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:27:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:27:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:27:08] 2.12.6.0 3074763 24371 331100 146802 2 106 20977588 32935936 12745 16776704 0 61718517 99.626 63762048 10373 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:27:08] CVMFS is ok
[2025-06-04 22:27:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:27:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:27:08] Further information can be found at the LHC@home message board.
[2025-06-04 22:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:27:08] Checking for apptainer binary...
[2025-06-04 22:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:27:08] Running /usr/bin/apptainer --version
[2025-06-04 22:27:08] apptainer version 1.4.1-1.el9
[2025-06-04 22:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:27:08] c6-12-25-1.aglt2.org
[2025-06-04 22:27:08] apptainer works
[2025-06-04 22:27:09] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:27:09] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:27:09] Starting ATLAS job with PandaID=6667923322
[2025-06-04 22:27:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:18:39]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:18:40] 2025-06-05 07:18:26,002 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667923322/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,004 | INFO     | extracted standard info from prmon json
[2025-06-05 03:18:40] 2025-06-05 07:18:26,005 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:18:40] 2025-06-05 07:18:26,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:18:40] 2025-06-05 07:18:26,006 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:18:40] 2025-06-05 07:18:26,006 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:18:40] 2025-06-05 07:18:26,020 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:18:40] 2025-06-05 07:18:26,022 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 03:18:40] 2025-06-05 07:18:26,028 | INFO     | sum of deviations: 14707326248.999989
[2025-06-05 03:18:40] 2025-06-05 07:18:26,028 | INFO     | mean x: 1749099179.5
[2025-06-05 03:18:40] 2025-06-05 07:18:26,028 | INFO     | mean y: 2172831.5664335666
[2025-06-05 03:18:40] 2025-06-05 07:18:26,029 | INFO     | -- intersect: -3544139225.3348203
[2025-06-05 03:18:40] 2025-06-05 07:18:26,029 | INFO     | intersect: -3544139225.3348203
[2025-06-05 03:18:40] 2025-06-05 07:18:26,030 | INFO     | chi2: 4.1695130804262694
[2025-06-05 03:18:40] 2025-06-05 07:18:26,031 | INFO     | sum of square deviations: 6880054580.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,037 | INFO     | sum of deviations: 49171285161.99999
[2025-06-05 03:18:40] 2025-06-05 07:18:26,038 | INFO     | mean x: 1749099027.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,038 | INFO     | mean y: 2186750.572953737
[2025-06-05 03:18:40] 2025-06-05 07:18:26,038 | INFO     | -- intersect: -12498505799.62971
[2025-06-05 03:18:40] 2025-06-05 07:18:26,038 | INFO     | intersect: -12498505799.62971
[2025-06-05 03:18:40] 2025-06-05 07:18:26,039 | INFO     | chi2: 2.6278107767106524
[2025-06-05 03:18:40] 2025-06-05 07:18:26,040 | INFO     | current chi2=2.6278107767106524 (change=36.975595806453285 %)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,041 | INFO     | sum of square deviations: 6519285025.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,046 | INFO     | sum of deviations: 47712994090.999985
[2025-06-05 03:18:40] 2025-06-05 07:18:26,047 | INFO     | mean x: 1749098874.5
[2025-06-05 03:18:40] 2025-06-05 07:18:26,047 | INFO     | mean y: 2186131.427536232
[2025-06-05 03:18:40] 2025-06-05 07:18:26,047 | INFO     | -- intersect: -12799025035.680965
[2025-06-05 03:18:40] 2025-06-05 07:18:26,047 | INFO     | intersect: -12799025035.680965
[2025-06-05 03:18:40] 2025-06-05 07:18:26,048 | INFO     | chi2: 2.628732173330841
[2025-06-05 03:18:40] 2025-06-05 07:18:26,049 | INFO     | current chi2=2.628732173330841 (change=-0.03506327884620347 %)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,049 | INFO     | right removable region: 275
[2025-06-05 03:18:40] 2025-06-05 07:18:26,050 | INFO     | sum of square deviations: 6880054580.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,056 | INFO     | sum of deviations: -38580010102.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,056 | INFO     | mean x: 1749099332.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,056 | INFO     | mean y: 2194481.40569395
[2025-06-05 03:18:40] 2025-06-05 07:18:26,056 | INFO     | -- intersect: 9810295436.610826
[2025-06-05 03:18:40] 2025-06-05 07:18:26,057 | INFO     | intersect: 9810295436.610826
[2025-06-05 03:18:40] 2025-06-05 07:18:26,058 | INFO     | chi2: 2.1983066513203777
[2025-06-05 03:18:40] 2025-06-05 07:18:26,058 | INFO     | current chi2=2.1983066513203777 (change=47.27665775554698 %)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,059 | INFO     | sum of square deviations: 6519285025.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,064 | INFO     | sum of deviations: -60824625152.5
[2025-06-05 03:18:40] 2025-06-05 07:18:26,065 | INFO     | mean x: 1749099484.5
[2025-06-05 03:18:40] 2025-06-05 07:18:26,065 | INFO     | mean y: 2203854.6268115942
[2025-06-05 03:18:40] 2025-06-05 07:18:26,065 | INFO     | -- intersect: 16321220447.883291
[2025-06-05 03:18:40] 2025-06-05 07:18:26,065 | INFO     | intersect: 16321220447.883291
[2025-06-05 03:18:40] 2025-06-05 07:18:26,066 | INFO     | chi2: 1.8495406672139592
[2025-06-05 03:18:40] 2025-06-05 07:18:26,066 | INFO     | current chi2=1.8495406672139592 (change=15.865210792904524 %)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,067 | INFO     | left removable region: 20
[2025-06-05 03:18:40] 2025-06-05 07:18:26,068 | INFO     | sum of square deviations: 5141528960.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,072 | INFO     | sum of deviations: -26992476636.999996
[2025-06-05 03:18:40] 2025-06-05 07:18:26,072 | INFO     | mean x: 1749099454.0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,073 | INFO     | mean y: 2219608.6352941175
[2025-06-05 03:18:40] 2025-06-05 07:18:26,073 | INFO     | -- intersect: 9184804500.247856
[2025-06-05 03:18:40] 2025-06-05 07:18:26,073 | INFO     | intersect: 9184804500.247856
[2025-06-05 03:18:40] 2025-06-05 07:18:26,074 | INFO     | chi2: 0.19075176541919936
[2025-06-05 03:18:40] 2025-06-05 07:18:26,074 | INFO     | -- intersect: 9184804500.247856
[2025-06-05 03:18:40] 2025-06-05 07:18:26,075 | INFO     | current memory leak: -5.25 B/s (using 255 data points, chi2=0.19)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,076 | INFO     | ..............................
[2025-06-05 03:18:40] 2025-06-05 07:18:26,076 | INFO     | . Timing measurements:
[2025-06-05 03:18:40] 2025-06-05 07:18:26,078 | INFO     | . get job = 0 s
[2025-06-05 03:18:40] 2025-06-05 07:18:26,079 | INFO     | . initial setup = 2 s
[2025-06-05 03:18:40] 2025-06-05 07:18:26,079 | INFO     | . payload setup = 14 s
[2025-06-05 03:18:40] 2025-06-05 07:18:26,079 | INFO     | . stage-in = 0 s
[2025-06-05 03:18:40] 2025-06-05 07:18:26,079 | INFO     | . payload execution = 17402 s
[2025-06-05 03:18:40] 2025-06-05 07:18:26,079 | INFO     | . stage-out = 3 s
[2025-06-05 03:18:40] 2025-06-05 07:18:26,080 | INFO     | . log creation = 0 s
[2025-06-05 03:18:40] 2025-06-05 07:18:26,080 | INFO     | ..............................
[2025-06-05 03:18:40] 2025-06-05 07:18:26,337 | INFO     | 
[2025-06-05 03:18:40] 2025-06-05 07:18:26,337 | INFO     | job summary report
[2025-06-05 03:18:40] 2025-06-05 07:18:26,338 | INFO     | --------------------------------------------------
[2025-06-05 03:18:40] 2025-06-05 07:18:26,338 | INFO     | PanDA job id: 6667923322
[2025-06-05 03:18:40] 2025-06-05 07:18:26,339 | INFO     | task id: 44871837
[2025-06-05 03:18:40] 2025-06-05 07:18:26,339 | INFO     | errors: (none)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,339 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:18:40] 2025-06-05 07:18:26,339 | INFO     | pilot state: finished 
[2025-06-05 03:18:40] 2025-06-05 07:18:26,339 | INFO     | transexitcode: 0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,340 | INFO     | exeerrorcode: 0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,340 | INFO     | exeerrordiag: 
[2025-06-05 03:18:40] 2025-06-05 07:18:26,340 | INFO     | exitcode: 0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,340 | INFO     | exitmsg: OK
[2025-06-05 03:18:40] 2025-06-05 07:18:26,340 | INFO     | cpuconsumptiontime: 130954 s
[2025-06-05 03:18:40] 2025-06-05 07:18:26,340 | INFO     | nevents: 400
[2025-06-05 03:18:40] 2025-06-05 07:18:26,341 | INFO     | neventsw: 0
[2025-06-05 03:18:40] 2025-06-05 07:18:26,341 | INFO     | pid: 1976389
[2025-06-05 03:18:40] 2025-06-05 07:18:26,341 | INFO     | pgrp: 1976389
[2025-06-05 03:18:40] 2025-06-05 07:18:26,341 | INFO     | corecount: 8
[2025-06-05 03:18:40] 2025-06-05 07:18:26,341 | INFO     | event service: False
[2025-06-05 03:18:40] 2025-06-05 07:18:26,341 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 10: 2397654, 13: 2397682, 17420: 2430179, 17425: 2439120, 17429: 2439176, 17441: 2439346}
[2025-06-05 03:18:40] 2025-06-05 07:18:26,342 | INFO     | --------------------------------------------------
[2025-06-05 03:18:40] 2025-06-05 07:18:26,342 | INFO     | 
[2025-06-05 03:18:40] 2025-06-05 07:18:26,342 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 03:18:40] 2025-06-05 07:18:26,371 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,374 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,374 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:18:40] 2025-06-05 07:18:26,374 | INFO     | job 6667923322 has completed (purged errors)
[2025-06-05 03:18:40] 2025-06-05 07:18:26,374 | INFO     | overall cleanup function is called
[2025-06-05 03:18:40] 2025-06-05 07:18:27,383 | INFO     | --- collectZombieJob: --- 10, [1976389]
[2025-06-05 03:18:40] 2025-06-05 07:18:27,384 | INFO     | zombie collector waiting for pid 1976389
[2025-06-05 03:18:40] 2025-06-05 07:18:27,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:18:40] 2025-06-05 07:18:27,385 | INFO     | collected zombie processes
[2025-06-05 03:18:40] 2025-06-05 07:18:27,385 | INFO     | will attempt to kill all subprocesses of pid=1976389
[2025-06-05 03:18:40] 2025-06-05 07:18:28,234 | INFO     | process IDs to be killed: [1976389] (in reverse order)
[2025-06-05 03:18:40] 2025-06-05 07:18:28,469 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:18:40] 2025-06-05 07:18:28,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:18:40] 2025-06-05 07:18:28,499 | INFO     | did not find any defunct processes belonging to 1976389
[2025-06-05 03:18:40] 2025-06-05 07:18:28,528 | INFO     | did not find any defunct processes belonging to 1976389
[2025-06-05 03:18:40] 2025-06-05 07:18:28,529 | INFO     | ready for new job
[2025-06-05 03:18:40] 2025-06-05 07:18:28,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:18:40] 2025-06-05 07:18:28,535 | INFO     | **************************************
[2025-06-05 03:18:40] 2025-06-05 07:18:28,535 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:18:40] 2025-06-05 07:18:28,536 | INFO     | **************************************
[2025-06-05 03:18:40] 2025-06-05 07:18:28,536 | INFO     | 
[2025-06-05 03:18:40] 2025-06-05 07:18:28,563 | INFO     | architecture information:
[2025-06-05 03:18:40] 2025-06-05 07:18:28,564 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:18:40] 2025-06-05 07:18:28,591 | INFO     | cat /etc/os-release:
[2025-06-05 03:18:40] NAME="CentOS Linux"
[2025-06-05 03:18:40] VERSION="7 (Core)"
[2025-06-05 03:18:40] ID="centos"
[2025-06-05 03:18:40] ID_LIKE="rhel fedora"
[2025-06-05 03:18:40] VERSION_ID="7"
[2025-06-05 03:18:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:18:40] ANSI_COLOR="0;31"
[2025-06-05 03:18:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:18:40] HOME_URL="https://www.centos.org/"
[2025-06-05 03:18:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:18:40] 
[2025-06-05 03:18:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:18:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:18:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:18:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:18:40] 
[2025-06-05 03:18:40] 2025-06-05 07:18:28,592 | INFO     | **************************************
[2025-06-05 03:18:40] 2025-06-05 07:18:29,095 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 03:18:40] 2025-06-05 07:18:29,130 | INFO     | sufficient remaining disk space (76126617600 B)
[2025-06-05 03:18:40] 2025-06-05 07:18:29,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:18:40] 2025-06-05 07:18:29,132 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:18:40] 2025-06-05 07:18:29,132 | INFO     | update_server=False
[2025-06-05 03:18:40] 2025-06-05 07:18:29,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:18:40] 2025-06-05 07:18:29,133 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:18:40] 2025-06-05 07:18:29,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:18:40] 2025-06-05 07:18:29,135 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:18:40] 2025-06-05 07:18:29,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:18:40] 2025-06-05 07:18:29,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:18:40] 2025-06-05 07:18:29,362 | INFO     | all data control threads have been joined
[2025-06-05 03:18:40] 2025-06-05 07:18:29,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:18:40] 2025-06-05 07:18:29,581 | INFO     | all payload control threads have been joined
[2025-06-05 03:18:40] 2025-06-05 07:18:29,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:18:40] 2025-06-05 07:18:29,820 | INFO     | aborting loop
[2025-06-05 03:18:40] 2025-06-05 07:18:29,881 | INFO     | all job control threads have been joined
[2025-06-05 03:18:40] 2025-06-05 07:18:30,138 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,270 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,368 | INFO     | [data] control thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,587 | INFO     | [payload] control thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,766 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,826 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,887 | INFO     | [job] control thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,918 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,968 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:30,969 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:31,074 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:31,141 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:31,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:31,334 | INFO     | [job] validate thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:31,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:18:40] 2025-06-05 07:18:32,353 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:33,389 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:18:40] 2025-06-05 07:18:34,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799657387840)>', '<ExcThread(monitor, started 139799037998848)>']
[2025-06-05 03:18:40] 2025-06-05 07:18:35,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:18:40] 2025-06-05 07:18:35,166 | INFO     | [monitor] control thread has ended
[2025-06-05 03:18:40] 2025-06-05 07:18:39,330 | INFO     | all workflow threads have been joined
[2025-06-05 03:18:40] 2025-06-05 07:18:39,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:18:40] 2025-06-05 07:18:39,332 | INFO     | traces error code: 0
[2025-06-05 03:18:40] 2025-06-05 07:18:39,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:18:40] 2025-06-05 07:18:39,652 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:18:40] 2025-06-05 07:18:39,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:18:40] 2025-06-05 07:18:39,665 [wrapper] pilotpid: 1960977
[2025-06-05 03:18:40] 2025-06-05 07:18:39,670 [wrapper] Pilot exit status: 0
[2025-06-05 03:18:40] 2025-06-05 07:18:39,689 [wrapper] pandaids: 6667923322 6667923322
[2025-06-05 03:18:40] 2025-06-05 07:18:39,854 [wrapper] cleanup supervisor_pilot 2736410 1960978
[2025-06-05 03:18:40] 2025-06-05 07:18:39,859 [wrapper] Test setup, not cleaning
[2025-06-05 03:18:40] 2025-06-05 07:18:39,864 [wrapper] apfmon messages muted
[2025-06-05 03:18:40] 2025-06-05 07:18:39,868 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:18:40] 2025-06-05 07:18:39,871 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:18:40]  *** Error codes and diagnostics ***
[2025-06-05 03:18:40]     "exeErrorCode": 0,
[2025-06-05 03:18:40]     "exeErrorDiag": "",
[2025-06-05 03:18:40]     "pilotErrorCode": 0,
[2025-06-05 03:18:40]     "pilotErrorDiag": "",
[2025-06-05 03:18:40]  *** Listing of results directory ***
[2025-06-05 03:18:40] total 640168
[2025-06-05 03:18:40] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas      5111 May 27 23:05 queuedata.json
[2025-06-05 03:18:40] -rwx------. 1 boincer umatlas     37140 May 27 23:05 runpilot2-wrapper.sh
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas       100 Jun  4 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:18:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 22:19 run_atlas
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas       105 Jun  4 22:19 job.xml
[2025-06-05 03:18:40] -rw-r--r--. 3 boincer umatlas 222733368 Jun  4 22:19 EVNT.44871834._003044.pool.root.1
[2025-06-05 03:18:40] -rw-r--r--. 3 boincer umatlas 222733368 Jun  4 22:19 ATLAS.root_0
[2025-06-05 03:18:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 22:19 shared
[2025-06-05 03:18:40] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 22:19 input.tar.gz
[2025-06-05 03:18:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:19 start_atlas.sh
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas         0 Jun  4 22:19 boinc_lockfile
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 22:27 pandaJob.out
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas    987109 Jun  4 22:27 agis_schedconf.cvmfs.json
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas      6859 Jun  5 03:11 init_data.xml
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas 202290365 Jun  5 03:16 HITS.44871837._077874.pool.root.1
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas       532 Jun  5 03:16 boinc_task_state.xml
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas        96 Jun  5 03:17 pilot_heartbeat.json
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas      1043 Jun  5 03:18 memory_monitor_summary.json
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas   1598969 Jun  5 03:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas    429015 Jun  5 03:18 log.44871837._077874.job.log.tgz.1
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 03:18 boinc_mmap_file
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas        29 Jun  5 03:18 wrapper_checkpoint.txt
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas      7736 Jun  5 03:18 heartbeat.json
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas      4476 Jun  5 03:18 pilotlog.txt
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas   1537677 Jun  5 03:18 log.44871837._077874.job.log.1
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas       357 Jun  5 03:18 output.list
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas       620 Jun  5 03:18 runtime_log
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas   1986560 Jun  5 03:18 result.tar.gz
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas      8755 Jun  5 03:18 runtime_log.err
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas       785 Jun  5 03:18 gK1NDmsHMe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmC8aKDmHH8x6m.diag
[2025-06-05 03:18:40] -rw-r--r--. 1 boincer umatlas     23181 Jun  5 03:18 stderr.txt
[2025-06-05 03:18:40] HITS file was successfully produced:
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas 202290365 Jun  5 03:16 shared/HITS.pool.root.1
[2025-06-05 03:18:40]  *** Contents of shared directory: ***
[2025-06-05 03:18:40] total 417532
[2025-06-05 03:18:40] -rw-r--r--. 3 boincer umatlas 222733368 Jun  4 22:19 ATLAS.root_0
[2025-06-05 03:18:40] -rw-r--r--. 2 boincer umatlas    508886 Jun  4 22:19 input.tar.gz
[2025-06-05 03:18:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:19 start_atlas.sh
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas 202290365 Jun  5 03:16 HITS.pool.root.1
[2025-06-05 03:18:40] -rw-------. 1 boincer umatlas   1986560 Jun  5 03:18 result.tar.gz
03:18:41 (1952796): run_atlas exited; CPU time 132792.270465
03:18:41 (1952796): called boinc_finish(0)

</stderr_txt>
]]>

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