Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:35 (1914857): wrapper (7.7.26015): starting
22:19:35 (1914857): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:19:35] Arguments: --nthreads 8
[2025-06-04 22:19:35] Threads: 8
[2025-06-04 22:19:35] Checking for CVMFS
[2025-06-04 22:19:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:19:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:19:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:19:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:19:36] 2.12.6.0 3074763 24363 335520 146802 1 92 20974951 32935936 12648 16776704 0 61686258 99.626 63761395 10373 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:19:36] CVMFS is ok
[2025-06-04 22:19:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:19:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:19:36] Further information can be found at the LHC@home message board.
[2025-06-04 22:19:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:19:36] Checking for apptainer binary...
[2025-06-04 22:19:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:19:36] Running /usr/bin/apptainer --version
[2025-06-04 22:19:36] apptainer version 1.4.1-1.el9
[2025-06-04 22:19:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:19:36] c6-12-25-1.aglt2.org
[2025-06-04 22:19:36] apptainer works
[2025-06-04 22:19:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:19:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:19:36] Starting ATLAS job with PandaID=6667732148
[2025-06-04 22:19:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:27:07 (1952795): wrapper (7.7.26015): starting
22:27:07 (1952795): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:27:07] Arguments: --nthreads 8
[2025-06-04 22:27:07] Threads: 8
[2025-06-04 22:27:07] This job has been restarted, cleaning up previous attempt
[2025-06-04 22:27:07] Checking for CVMFS
[2025-06-04 22:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:27:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:27:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:27:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:27:08] 2.12.6.0 3074763 24371 331100 146802 2 106 20977588 32935936 12745 16776704 0 61718517 99.626 63762048 10373 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:27:08] CVMFS is ok
[2025-06-04 22:27:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:27:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:27:08] Further information can be found at the LHC@home message board.
[2025-06-04 22:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:27:08] Checking for apptainer binary...
[2025-06-04 22:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:27:08] Running /usr/bin/apptainer --version
[2025-06-04 22:27:08] apptainer version 1.4.1-1.el9
[2025-06-04 22:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:27:08] c6-12-25-1.aglt2.org
[2025-06-04 22:27:08] apptainer works
[2025-06-04 22:27:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:27:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:27:09] Starting ATLAS job with PandaID=6667732148
[2025-06-04 22:27:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:14:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:14:09] 2025-06-05 07:13:47,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:14:09] 2025-06-05 07:13:50,231 | INFO     | monitor loop #1156: job 0:6667732148 is in state 'finished'
[2025-06-05 03:14:09] 2025-06-05 07:13:50,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:14:09] 2025-06-05 07:13:52,735 | INFO     | monitor loop #1157: job 0:6667732148 is in state 'finished'
[2025-06-05 03:14:09] 2025-06-05 07:13:52,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:14:09] 2025-06-05 07:13:53,304 | INFO     | PID=1961017 has CPU usage=26.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 03:14:09] 2025-06-05 07:13:53,304 | INFO     | .. there are 14 such processes running
[2025-06-05 03:14:09] 2025-06-05 07:13:54,924 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 03:14:09] 2025-06-05 07:13:54,925 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667732148/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:14:09] 2025-06-05 07:13:54,927 | INFO     | extracted standard info from prmon json
[2025-06-05 03:14:09] 2025-06-05 07:13:54,927 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:14:09] 2025-06-05 07:13:54,928 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:14:09] 2025-06-05 07:13:54,929 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:14:09] 2025-06-05 07:13:54,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:14:09] 2025-06-05 07:13:54,943 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:14:09] 2025-06-05 07:13:54,945 | INFO     | sum of square deviations: 6880054580.0
[2025-06-05 03:14:09] 2025-06-05 07:13:54,951 | INFO     | sum of deviations: 34811825747.99997
[2025-06-05 03:14:09] 2025-06-05 07:13:54,951 | INFO     | mean x: 1749099027.0
[2025-06-05 03:14:09] 2025-06-05 07:13:54,951 | INFO     | mean y: 2131982.857651246
[2025-06-05 03:14:09] 2025-06-05 07:13:54,952 | INFO     | -- intersect: -8847991200.891901
[2025-06-05 03:14:09] 2025-06-05 07:13:54,952 | INFO     | intersect: -8847991200.891901
[2025-06-05 03:14:09] 2025-06-05 07:13:54,953 | INFO     | chi2: 3.238473229521441
[2025-06-05 03:14:09] 2025-06-05 07:13:54,954 | INFO     | sum of square deviations: 6519285025.0
[2025-06-05 03:14:09] 2025-06-05 07:13:54,960 | INFO     | sum of deviations: 51796871897.500015
[2025-06-05 03:14:09] 2025-06-05 07:13:54,960 | INFO     | mean x: 1749098874.5
[2025-06-05 03:14:09] 2025-06-05 07:13:54,961 | INFO     | mean y: 2139068.663043478
[2025-06-05 03:14:09] 2025-06-05 07:13:54,961 | INFO     | -- intersect: -13894760666.678402
[2025-06-05 03:14:09] 2025-06-05 07:13:54,961 | INFO     | intersect: -13894760666.678402
[2025-06-05 03:14:09] 2025-06-05 07:13:54,962 | INFO     | chi2: 2.57641679835531
[2025-06-05 03:14:09] 2025-06-05 07:13:54,963 | INFO     | current chi2=2.57641679835531 (change=20.443473953433454 %)
[2025-06-05 03:14:09] 2025-06-05 07:13:54,963 | INFO     | right removable region: 275
[2025-06-05 03:14:09] 2025-06-05 07:13:54,964 | INFO     | sum of square deviations: 6519285025.0
[2025-06-05 03:14:09] 2025-06-05 07:13:54,969 | INFO     | sum of deviations: -16772327010.5
[2025-06-05 03:14:09] 2025-06-05 07:13:54,970 | INFO     | mean x: 1749099179.5
[2025-06-05 03:14:09] 2025-06-05 07:13:54,970 | INFO     | mean y: 2153699.9601449277
[2025-06-05 03:14:09] 2025-06-05 07:13:54,970 | INFO     | -- intersect: 4502104737.516021
[2025-06-05 03:14:09] 2025-06-05 07:13:54,971 | INFO     | intersect: 4502104737.516021
[2025-06-05 03:14:09] 2025-06-05 07:13:54,972 | INFO     | chi2: 1.256136224363301
[2025-06-05 03:14:09] 2025-06-05 07:13:54,972 | INFO     | current chi2=1.256136224363301 (change=61.21208559290996 %)
[2025-06-05 03:14:09] 2025-06-05 07:13:54,973 | INFO     | sum of square deviations: 6171352920.0
[2025-06-05 03:14:09] 2025-06-05 07:13:54,979 | INFO     | sum of deviations: -37343718771.00001
[2025-06-05 03:14:09] 2025-06-05 07:13:54,979 | INFO     | mean x: 1749099332.0
[2025-06-05 03:14:09] 2025-06-05 07:13:54,979 | INFO     | mean y: 2162692.6900369003
[2025-06-05 03:14:09] 2025-06-05 07:13:54,979 | INFO     | -- intersect: 10586207132.130713
[2025-06-05 03:14:09] 2025-06-05 07:13:54,980 | INFO     | intersect: 10586207132.130713
[2025-06-05 03:14:09] 2025-06-05 07:13:54,981 | INFO     | chi2: 0.9445020026146238
[2025-06-05 03:14:09] 2025-06-05 07:13:54,981 | INFO     | current chi2=0.9445020026146238 (change=24.808951107722056 %)
[2025-06-05 03:14:09] 2025-06-05 07:13:54,981 | INFO     | left removable region: 20
[2025-06-05 03:14:09] 2025-06-05 07:13:54,982 | INFO     | sum of square deviations: 5141528960.0
[2025-06-05 03:14:09] 2025-06-05 07:13:54,987 | INFO     | sum of deviations: -21437479917.000008
[2025-06-05 03:14:09] 2025-06-05 07:13:54,988 | INFO     | mean x: 1749099454.0
[2025-06-05 03:14:09] 2025-06-05 07:13:54,988 | INFO     | mean y: 2171702.2784313727
[2025-06-05 03:14:09] 2025-06-05 07:13:54,988 | INFO     | -- intersect: 7294999324.1150055
[2025-06-05 03:14:09] 2025-06-05 07:13:54,989 | INFO     | intersect: 7294999324.1150055
[2025-06-05 03:14:09] 2025-06-05 07:13:54,990 | INFO     | chi2: 0.18305578959333244
[2025-06-05 03:14:09] 2025-06-05 07:13:54,990 | INFO     | -- intersect: 7294999324.1150055
[2025-06-05 03:14:09] 2025-06-05 07:13:54,990 | INFO     | current memory leak: -4.17 B/s (using 255 data points, chi2=0.18)
[2025-06-05 03:14:09] 2025-06-05 07:13:54,992 | INFO     | ..............................
[2025-06-05 03:14:09] 2025-06-05 07:13:54,993 | INFO     | . Timing measurements:
[2025-06-05 03:14:09] 2025-06-05 07:13:54,993 | INFO     | . get job = 0 s
[2025-06-05 03:14:09] 2025-06-05 07:13:54,993 | INFO     | . initial setup = 1 s
[2025-06-05 03:14:09] 2025-06-05 07:13:54,993 | INFO     | . payload setup = 14 s
[2025-06-05 03:14:09] 2025-06-05 07:13:54,993 | INFO     | . stage-in = 0 s
[2025-06-05 03:14:09] 2025-06-05 07:13:54,994 | INFO     | . payload execution = 17131 s
[2025-06-05 03:14:09] 2025-06-05 07:13:54,994 | INFO     | . stage-out = 4 s
[2025-06-05 03:14:09] 2025-06-05 07:13:54,994 | INFO     | . log creation = 0 s
[2025-06-05 03:14:09] 2025-06-05 07:13:54,994 | INFO     | ..............................
[2025-06-05 03:14:09] 2025-06-05 07:13:55,263 | INFO     | 
[2025-06-05 03:14:09] 2025-06-05 07:13:55,264 | INFO     | job summary report
[2025-06-05 03:14:09] 2025-06-05 07:13:55,264 | INFO     | --------------------------------------------------
[2025-06-05 03:14:09] 2025-06-05 07:13:55,264 | INFO     | PanDA job id: 6667732148
[2025-06-05 03:14:09] 2025-06-05 07:13:55,264 | INFO     | task id: 44871837
[2025-06-05 03:14:09] 2025-06-05 07:13:55,264 | INFO     | errors: (none)
[2025-06-05 03:14:09] 2025-06-05 07:13:55,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:14:09] 2025-06-05 07:13:55,265 | INFO     | pilot state: finished 
[2025-06-05 03:14:09] 2025-06-05 07:13:55,265 | INFO     | transexitcode: 0
[2025-06-05 03:14:09] 2025-06-05 07:13:55,265 | INFO     | exeerrorcode: 0
[2025-06-05 03:14:09] 2025-06-05 07:13:55,265 | INFO     | exeerrordiag: 
[2025-06-05 03:14:09] 2025-06-05 07:13:55,266 | INFO     | exitcode: 0
[2025-06-05 03:14:09] 2025-06-05 07:13:55,266 | INFO     | exitmsg: OK
[2025-06-05 03:14:09] 2025-06-05 07:13:55,266 | INFO     | cpuconsumptiontime: 127913 s
[2025-06-05 03:14:09] 2025-06-05 07:13:55,266 | INFO     | nevents: 400
[2025-06-05 03:14:09] 2025-06-05 07:13:55,267 | INFO     | neventsw: 0
[2025-06-05 03:14:09] 2025-06-05 07:13:55,267 | INFO     | pid: 1976390
[2025-06-05 03:14:09] 2025-06-05 07:13:55,267 | INFO     | pgrp: 1976390
[2025-06-05 03:14:09] 2025-06-05 07:13:55,267 | INFO     | corecount: 8
[2025-06-05 03:14:09] 2025-06-05 07:13:55,267 | INFO     | event service: False
[2025-06-05 03:14:09] 2025-06-05 07:13:55,268 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 10: 2397654, 13: 2397682, 17149: 2429968, 17150: 2430095, 17155: 2439092, 17158: 2439148, 17170: 2439318}
[2025-06-05 03:14:09] 2025-06-05 07:13:55,268 | INFO     | --------------------------------------------------
[2025-06-05 03:14:09] 2025-06-05 07:13:55,268 | INFO     | 
[2025-06-05 03:14:09] 2025-06-05 07:13:55,268 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 03:14:09] 2025-06-05 07:13:55,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:14:09] 2025-06-05 07:13:55,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:14:09] 2025-06-05 07:13:55,337 | INFO     | job 6667732148 has completed (purged errors)
[2025-06-05 03:14:09] 2025-06-05 07:13:55,337 | INFO     | overall cleanup function is called
[2025-06-05 03:14:09] 2025-06-05 07:13:56,349 | INFO     | --- collectZombieJob: --- 10, [1976390]
[2025-06-05 03:14:09] 2025-06-05 07:13:56,350 | INFO     | zombie collector waiting for pid 1976390
[2025-06-05 03:14:09] 2025-06-05 07:13:56,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:14:09] 2025-06-05 07:13:56,351 | INFO     | collected zombie processes
[2025-06-05 03:14:09] 2025-06-05 07:13:56,351 | INFO     | will attempt to kill all subprocesses of pid=1976390
[2025-06-05 03:14:09] 2025-06-05 07:13:57,257 | INFO     | process IDs to be killed: [1976390] (in reverse order)
[2025-06-05 03:14:09] 2025-06-05 07:13:57,643 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:14:09] 2025-06-05 07:13:57,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:14:09] 2025-06-05 07:13:57,674 | INFO     | did not find any defunct processes belonging to 1976390
[2025-06-05 03:14:09] 2025-06-05 07:13:57,704 | INFO     | did not find any defunct processes belonging to 1976390
[2025-06-05 03:14:09] 2025-06-05 07:13:57,705 | INFO     | ready for new job
[2025-06-05 03:14:09] 2025-06-05 07:13:57,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:14:09] 2025-06-05 07:13:57,711 | INFO     | **************************************
[2025-06-05 03:14:09] 2025-06-05 07:13:57,712 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:14:09] 2025-06-05 07:13:57,712 | INFO     | **************************************
[2025-06-05 03:14:09] 2025-06-05 07:13:57,712 | INFO     | 
[2025-06-05 03:14:09] 2025-06-05 07:13:57,739 | INFO     | architecture information:
[2025-06-05 03:14:09] 2025-06-05 07:13:57,741 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:14:09] 2025-06-05 07:13:57,773 | INFO     | cat /etc/os-release:
[2025-06-05 03:14:09] NAME="CentOS Linux"
[2025-06-05 03:14:09] VERSION="7 (Core)"
[2025-06-05 03:14:09] ID="centos"
[2025-06-05 03:14:09] ID_LIKE="rhel fedora"
[2025-06-05 03:14:09] VERSION_ID="7"
[2025-06-05 03:14:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:14:09] ANSI_COLOR="0;31"
[2025-06-05 03:14:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:14:09] HOME_URL="https://www.centos.org/"
[2025-06-05 03:14:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:14:09] 
[2025-06-05 03:14:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:14:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:14:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:14:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:14:09] 
[2025-06-05 03:14:09] 2025-06-05 07:13:57,775 | INFO     | **************************************
[2025-06-05 03:14:09] 2025-06-05 07:13:58,279 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 03:14:09] 2025-06-05 07:13:58,313 | INFO     | sufficient remaining disk space (75890688000 B)
[2025-06-05 03:14:09] 2025-06-05 07:13:58,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:14:09] 2025-06-05 07:13:58,314 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:14:09] 2025-06-05 07:13:58,314 | INFO     | update_server=False
[2025-06-05 03:14:09] 2025-06-05 07:13:58,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:14:09] 2025-06-05 07:13:58,315 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:14:09] 2025-06-05 07:13:58,316 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:14:09] 2025-06-05 07:13:58,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:14:09] 2025-06-05 07:13:58,316 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:14:09] 2025-06-05 07:13:58,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:14:09] 2025-06-05 07:13:58,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:14:09] 2025-06-05 07:13:58,757 | INFO     | aborting loop
[2025-06-05 03:14:09] 2025-06-05 07:13:58,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:14:09] 2025-06-05 07:13:59,120 | INFO     | all data control threads have been joined
[2025-06-05 03:14:09] 2025-06-05 07:13:59,320 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:13:59,435 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:13:59,481 | INFO     | all job control threads have been joined
[2025-06-05 03:14:09] 2025-06-05 07:13:59,592 | INFO     | [job] validate thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:13:59,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:13:59,708 | INFO     | all payload control threads have been joined
[2025-06-05 03:14:09] 2025-06-05 07:13:59,763 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:13:59,822 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:00,054 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:00,055 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:00,126 | INFO     | [data] control thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:00,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:14:09] 2025-06-05 07:14:00,487 | INFO     | [job] control thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:00,554 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:00,688 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:00,714 | INFO     | [payload] control thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:00,907 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:01,282 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:02,799 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:14:09] 2025-06-05 07:14:03,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599988148032)>', '<ExcThread(monitor, started 140599353132800)>']
[2025-06-05 03:14:09] 2025-06-05 07:14:04,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:14:09] 2025-06-05 07:14:04,344 | INFO     | [monitor] control thread has ended
[2025-06-05 03:14:09] 2025-06-05 07:14:08,369 | INFO     | all workflow threads have been joined
[2025-06-05 03:14:09] 2025-06-05 07:14:08,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:14:09] 2025-06-05 07:14:08,370 | INFO     | traces error code: 0
[2025-06-05 03:14:09] 2025-06-05 07:14:08,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:14:09] 2025-06-05 07:14:08,700 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:14:09] 2025-06-05 07:14:08,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:14:09] 2025-06-05 07:14:08,711 [wrapper] pilotpid: 1961017
[2025-06-05 03:14:09] 2025-06-05 07:14:08,717 [wrapper] Pilot exit status: 0
[2025-06-05 03:14:09] 2025-06-05 07:14:08,737 [wrapper] pandaids: 6667732148 6667732148
[2025-06-05 03:14:09] 2025-06-05 07:14:08,903 [wrapper] cleanup supervisor_pilot 2736411 1961018
[2025-06-05 03:14:09] 2025-06-05 07:14:08,909 [wrapper] Test setup, not cleaning
[2025-06-05 03:14:09] 2025-06-05 07:14:08,914 [wrapper] apfmon messages muted
[2025-06-05 03:14:09] 2025-06-05 07:14:08,920 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:14:09] 2025-06-05 07:14:08,926 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:14:09]  *** Error codes and diagnostics ***
[2025-06-05 03:14:09]     "exeErrorCode": 0,
[2025-06-05 03:14:09]     "exeErrorDiag": "",
[2025-06-05 03:14:09]     "pilotErrorCode": 0,
[2025-06-05 03:14:09]     "pilotErrorDiag": "",
[2025-06-05 03:14:09]  *** Listing of results directory ***
[2025-06-05 03:14:09] total 642852
[2025-06-05 03:14:09] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas    495897 May 27 19:30 pilot3.tar.gz
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas      5111 May 27 20:10 queuedata.json
[2025-06-05 03:14:09] -rwx------. 1 boincer umatlas     37140 May 27 20:14 runpilot2-wrapper.sh
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas       100 Jun  4 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:14:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 22:19 run_atlas
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas       105 Jun  4 22:19 job.xml
[2025-06-05 03:14:09] -rw-r--r--. 3 boincer umatlas 225281216 Jun  4 22:19 EVNT.44871834._002961.pool.root.1
[2025-06-05 03:14:09] -rw-r--r--. 3 boincer umatlas 225281216 Jun  4 22:19 ATLAS.root_0
[2025-06-05 03:14:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:19 start_atlas.sh
[2025-06-05 03:14:09] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 22:19 shared
[2025-06-05 03:14:09] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 22:19 input.tar.gz
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas         0 Jun  4 22:19 boinc_lockfile
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 22:27 pandaJob.out
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas    987109 Jun  4 22:27 agis_schedconf.cvmfs.json
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas      6859 Jun  5 03:11 init_data.xml
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas 199966618 Jun  5 03:12 HITS.44871837._075582.pool.root.1
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas       531 Jun  5 03:12 boinc_task_state.xml
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas      1043 Jun  5 03:13 memory_monitor_summary.json
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas   1598969 Jun  5 03:13 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas    438174 Jun  5 03:13 log.44871837._075582.job.log.tgz.1
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas      7731 Jun  5 03:13 heartbeat.json
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas        96 Jun  5 03:13 pilot_heartbeat.json
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 03:14 boinc_mmap_file
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas        29 Jun  5 03:14 wrapper_checkpoint.txt
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas      4476 Jun  5 03:14 pilotlog.txt
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas   1517897 Jun  5 03:14 log.44871837._075582.job.log.1
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas       357 Jun  5 03:14 output.list
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas       620 Jun  5 03:14 runtime_log
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas   1976320 Jun  5 03:14 result.tar.gz
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas      8755 Jun  5 03:14 runtime_log.err
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas       784 Jun  5 03:14 M0NNDmOcJe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnkaKDmv4RKDo.diag
[2025-06-05 03:14:09] -rw-r--r--. 1 boincer umatlas     23405 Jun  5 03:14 stderr.txt
[2025-06-05 03:14:09] HITS file was successfully produced:
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas 199966618 Jun  5 03:12 shared/HITS.pool.root.1
[2025-06-05 03:14:09]  *** Contents of shared directory: ***
[2025-06-05 03:14:09] total 417740
[2025-06-05 03:14:09] -rw-r--r--. 3 boincer umatlas 225281216 Jun  4 22:19 ATLAS.root_0
[2025-06-05 03:14:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:19 start_atlas.sh
[2025-06-05 03:14:09] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 22:19 input.tar.gz
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas 199966618 Jun  5 03:12 HITS.pool.root.1
[2025-06-05 03:14:09] -rw-------. 1 boincer umatlas   1976320 Jun  5 03:14 result.tar.gz
03:14:10 (1952795): run_atlas exited; CPU time 129611.451021
03:14:10 (1952795): called boinc_finish(0)

</stderr_txt>
]]>

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