Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:04:47 (4164702): wrapper (7.7.26015): starting
22:04:47 (4164702): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 22:04:48] Arguments: --nthreads 8
[2025-06-04 22:04:48] Threads: 8
[2025-06-04 22:04:48] Checking for CVMFS
[2025-06-04 22:04:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:04:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:04:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:04:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:04:49] 2.12.6.0 5697 2156 235768 146800 3 338 28867385 32935936 31715 16776704 0 24373960 99.689 17515646 23481 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:04:49] CVMFS is ok
[2025-06-04 22:04:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:04:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:04:49] Further information can be found at the LHC@home message board.
[2025-06-04 22:04:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:04:49] Checking for apptainer binary...
[2025-06-04 22:04:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:04:49] Running /usr/bin/apptainer --version
[2025-06-04 22:04:49] apptainer version 1.4.1-1.el9
[2025-06-04 22:04:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:04:49] c7-3-17.aglt2.org
[2025-06-04 22:04:49] apptainer works
[2025-06-04 22:04:49] Set ATHENA_PROC_NUMBER=8
[2025-06-04 22:04:49] Set ATHENA_CORE_NUMBER=8
[2025-06-04 22:04:49] Starting ATLAS job with PandaID=6668728437
[2025-06-04 22:04:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:59:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:59:14] 2025-06-05 03:58:53,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:59:14] 2025-06-05 03:58:53,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:59:14] 2025-06-05 03:58:53,771 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:59:14] 2025-06-05 03:58:53,772 | INFO     | sum of square deviations: 435610028.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,772 | INFO     | sum of deviations: 13207698101.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,772 | INFO     | mean x: 1749092524.5
[2025-06-04 23:59:14] 2025-06-05 03:58:53,772 | INFO     | mean y: 2131729.7678571427
[2025-06-04 23:59:14] 2025-06-05 03:58:53,772 | INFO     | -- intersect: -53030361852.56984
[2025-06-04 23:59:14] 2025-06-05 03:58:53,773 | INFO     | intersect: -53030361852.56984
[2025-06-04 23:59:14] 2025-06-05 03:58:53,773 | INFO     | chi2: 2.203809911286025
[2025-06-04 23:59:14] 2025-06-05 03:58:53,773 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,773 | INFO     | sum of deviations: 18634148850.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,773 | INFO     | mean x: 1749092372.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,774 | INFO     | mean y: 2145913.8411214952
[2025-06-04 23:59:14] 2025-06-05 03:58:53,774 | INFO     | -- intersect: -85806388358.72256
[2025-06-04 23:59:14] 2025-06-05 03:58:53,774 | INFO     | intersect: -85806388358.72256
[2025-06-04 23:59:14] 2025-06-05 03:58:53,774 | INFO     | chi2: 1.4269889463504415
[2025-06-04 23:59:14] 2025-06-05 03:58:53,774 | INFO     | current chi2=1.4269889463504415 (change=35.24900042228563 %)
[2025-06-04 23:59:14] 2025-06-05 03:58:53,774 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | sum of deviations: 17251656958.5
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | mean x: 1749092219.5
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | mean y: 2141760.8725490198
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | -- intersect: -91705669287.37315
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | intersect: -91705669287.37315
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | chi2: 1.4288307312943256
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | current chi2=1.4288307312943256 (change=-0.12906791945337098 %)
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | right removable region: 101
[2025-06-04 23:59:14] 2025-06-05 03:58:53,775 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,776 | INFO     | sum of deviations: -1188534797.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,776 | INFO     | mean x: 1749092677.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,776 | INFO     | mean y: 2170294.271028037
[2025-06-04 23:59:14] 2025-06-05 03:58:53,776 | INFO     | -- intersect: 5475264207.358998
[2025-06-04 23:59:14] 2025-06-05 03:58:53,776 | INFO     | intersect: 5475264207.358998
[2025-06-04 23:59:14] 2025-06-05 03:58:53,776 | INFO     | chi2: 0.8474063859409137
[2025-06-04 23:59:14] 2025-06-05 03:58:53,776 | INFO     | current chi2=0.8474063859409137 (change=61.548118029543986 %)
[2025-06-04 23:59:14] 2025-06-05 03:58:53,777 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 23:59:14] 2025-06-05 03:58:53,777 | INFO     | sum of deviations: -1658593568.5000005
[2025-06-04 23:59:14] 2025-06-05 03:58:53,777 | INFO     | mean x: 1749092829.5
[2025-06-04 23:59:14] 2025-06-05 03:58:53,777 | INFO     | mean y: 2171644.1470588236
[2025-06-04 23:59:14] 2025-06-05 03:58:53,777 | INFO     | -- intersect: 8819066102.404182
[2025-06-04 23:59:14] 2025-06-05 03:58:53,777 | INFO     | intersect: 8819066102.404182
[2025-06-04 23:59:14] 2025-06-05 03:58:53,777 | INFO     | chi2: 0.8451905634386873
[2025-06-04 23:59:14] 2025-06-05 03:58:53,778 | INFO     | current chi2=0.8451905634386873 (change=0.26148286571691076 %)
[2025-06-04 23:59:14] 2025-06-05 03:58:53,778 | INFO     | left removable region: 20
[2025-06-04 23:59:14] 2025-06-05 03:58:53,778 | INFO     | sum of square deviations: 164765880.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,778 | INFO     | sum of deviations: 1797219881.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,778 | INFO     | mean x: 1749092799.0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,778 | INFO     | mean y: 2192979.049382716
[2025-06-04 23:59:14] 2025-06-05 03:58:53,778 | INFO     | -- intersect: -19076419365.18558
[2025-06-04 23:59:14] 2025-06-05 03:58:53,778 | INFO     | intersect: -19076419365.18558
[2025-06-04 23:59:14] 2025-06-05 03:58:53,779 | INFO     | chi2: 0.028623388279786787
[2025-06-04 23:59:14] 2025-06-05 03:58:53,779 | INFO     | -- intersect: -19076419365.18558
[2025-06-04 23:59:14] 2025-06-05 03:58:53,779 | INFO     | current memory leak: 10.91 B/s (using 81 data points, chi2=0.03)
[2025-06-04 23:59:14] 2025-06-05 03:58:53,779 | INFO     | ..............................
[2025-06-04 23:59:14] 2025-06-05 03:58:53,779 | INFO     | . Timing measurements:
[2025-06-04 23:59:14] 2025-06-05 03:58:53,779 | INFO     | . get job = 0 s
[2025-06-04 23:59:14] 2025-06-05 03:58:53,780 | INFO     | . initial setup = 3 s
[2025-06-04 23:59:14] 2025-06-05 03:58:53,780 | INFO     | . payload setup = 9 s
[2025-06-04 23:59:14] 2025-06-05 03:58:53,780 | INFO     | . stage-in = 0 s
[2025-06-04 23:59:14] 2025-06-05 03:58:53,780 | INFO     | . payload execution = 6785 s
[2025-06-04 23:59:14] 2025-06-05 03:58:53,780 | INFO     | . stage-out = 1 s
[2025-06-04 23:59:14] 2025-06-05 03:58:53,780 | INFO     | . log creation = 0 s
[2025-06-04 23:59:14] 2025-06-05 03:58:53,780 | INFO     | ..............................
[2025-06-04 23:59:14] 2025-06-05 03:58:53,865 | INFO     | 
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | job summary report
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | --------------------------------------------------
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | PanDA job id: 6668728437
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | task id: 44871837
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | errors: (none)
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | pilot state: finished 
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | transexitcode: 0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | exeerrorcode: 0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | exeerrordiag: 
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | exitcode: 0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | exitmsg: OK
[2025-06-04 23:59:14] 2025-06-05 03:58:53,868 | INFO     | cpuconsumptiontime: 41889 s
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | nevents: 400
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | neventsw: 0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | pid: 4184372
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | pgrp: 4184372
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | corecount: 8
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | event service: False
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | sizes: {0: 2397340, 6: 2397546, 11: 2397574, 6799: 2424673, 6801: 2433614, 6803: 2433670, 6811: 2433968}
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | --------------------------------------------------
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | 
[2025-06-04 23:59:14] 2025-06-05 03:58:53,869 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 23:59:14] 2025-06-05 03:58:53,891 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,891 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,891 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,891 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | job 6668728437 has completed (purged errors)
[2025-06-04 23:59:14] 2025-06-05 03:58:53,892 | INFO     | overall cleanup function is called
[2025-06-04 23:59:14] 2025-06-05 03:58:54,900 | INFO     | --- collectZombieJob: --- 10, [4184372]
[2025-06-04 23:59:14] 2025-06-05 03:58:54,900 | INFO     | zombie collector waiting for pid 4184372
[2025-06-04 23:59:14] 2025-06-05 03:58:54,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:59:14] 2025-06-05 03:58:54,901 | INFO     | collected zombie processes
[2025-06-04 23:59:14] 2025-06-05 03:58:54,901 | INFO     | will attempt to kill all subprocesses of pid=4184372
[2025-06-04 23:59:14] 2025-06-05 03:58:55,509 | INFO     | process IDs to be killed: [4184372] (in reverse order)
[2025-06-04 23:59:14] 2025-06-05 03:58:55,672 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:59:14] 2025-06-05 03:58:55,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:59:14] 2025-06-05 03:58:55,694 | INFO     | did not find any defunct processes belonging to 4184372
[2025-06-04 23:59:14] 2025-06-05 03:58:55,716 | INFO     | did not find any defunct processes belonging to 4184372
[2025-06-04 23:59:14] 2025-06-05 03:58:55,717 | INFO     | ready for new job
[2025-06-04 23:59:14] 2025-06-05 03:58:55,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:59:14] 2025-06-05 03:58:55,719 | INFO     | **************************************
[2025-06-04 23:59:14] 2025-06-05 03:58:55,719 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:59:14] 2025-06-05 03:58:55,719 | INFO     | **************************************
[2025-06-04 23:59:14] 2025-06-05 03:58:55,719 | INFO     | 
[2025-06-04 23:59:14] 2025-06-05 03:58:55,737 | INFO     | architecture information:
[2025-06-04 23:59:14] 2025-06-05 03:58:55,737 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:59:14] 2025-06-05 03:58:55,752 | INFO     | cat /etc/os-release:
[2025-06-04 23:59:14] NAME="CentOS Linux"
[2025-06-04 23:59:14] VERSION="7 (Core)"
[2025-06-04 23:59:14] ID="centos"
[2025-06-04 23:59:14] ID_LIKE="rhel fedora"
[2025-06-04 23:59:14] VERSION_ID="7"
[2025-06-04 23:59:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:59:14] ANSI_COLOR="0;31"
[2025-06-04 23:59:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:59:14] HOME_URL="https://www.centos.org/"
[2025-06-04 23:59:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:59:14] 
[2025-06-04 23:59:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:59:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:59:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:59:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:59:14] 
[2025-06-04 23:59:14] 2025-06-05 03:58:55,752 | INFO     | **************************************
[2025-06-04 23:59:14] 2025-06-05 03:58:56,268 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 23:59:14] 2025-06-05 03:58:56,290 | INFO     | sufficient remaining disk space (76154929152 B)
[2025-06-04 23:59:14] 2025-06-05 03:58:56,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:59:14] 2025-06-05 03:58:56,291 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:59:14] 2025-06-05 03:58:56,291 | INFO     | update_server=False
[2025-06-04 23:59:14] 2025-06-05 03:58:56,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:59:14] 2025-06-05 03:58:56,338 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 23:59:14] 2025-06-05 03:58:56,339 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 23:59:14] 2025-06-05 03:58:56,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:59:14] 2025-06-05 03:58:56,339 | INFO     | will abort loop
[2025-06-04 23:59:14] 2025-06-05 03:58:56,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:59:14] 2025-06-05 03:58:56,919 | INFO     | all data control threads have been joined
[2025-06-04 23:59:14] 2025-06-05 03:58:56,930 | INFO     | PID=4168927 has CPU usage=16.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 23:59:14] 2025-06-05 03:58:56,931 | INFO     | .. there are 40 such processes running
[2025-06-04 23:59:14] 2025-06-05 03:58:56,931 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:59:14] 2025-06-05 03:58:56,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:59:14] 2025-06-05 03:58:56,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:59:14] 2025-06-05 03:58:56,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:59:14] 2025-06-05 03:58:57,297 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:57,344 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:57,345 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:57,485 | INFO     | all job control threads have been joined
[2025-06-04 23:59:14] 2025-06-05 03:58:57,560 | INFO     | all payload control threads have been joined
[2025-06-04 23:59:14] 2025-06-05 03:58:57,789 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:57,937 | INFO     | [data] control thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,145 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,353 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,491 | INFO     | [job] control thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,553 | INFO     | [job] validate thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,566 | INFO     | [payload] control thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,670 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,740 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,752 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:58:58,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:59:14] 2025-06-05 03:58:59,883 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:59:00,979 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:59:06,468 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:59:14] 2025-06-05 03:59:07,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:59:14] 2025-06-05 03:59:09,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433083180864)>', '<ExcThread(monitor, started 140432579213056)>']
[2025-06-04 23:59:14] 2025-06-05 03:59:09,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:59:14] 2025-06-05 03:59:09,997 | INFO     | [monitor] control thread has ended
[2025-06-04 23:59:14] 2025-06-05 03:59:14,035 | INFO     | all workflow threads have been joined
[2025-06-04 23:59:14] 2025-06-05 03:59:14,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:59:14] 2025-06-05 03:59:14,036 | INFO     | traces error code: 0
[2025-06-04 23:59:14] 2025-06-05 03:59:14,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:59:14] 2025-06-05 03:59:14,202 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:59:14] 2025-06-05 03:59:14,206 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:59:14] 2025-06-05 03:59:14,209 [wrapper] pilotpid: 4168927
[2025-06-04 23:59:14] 2025-06-05 03:59:14,211 [wrapper] Pilot exit status: 0
[2025-06-04 23:59:14] 2025-06-05 03:59:14,232 [wrapper] pandaids: 6668728437
[2025-06-04 23:59:14] 2025-06-05 03:59:14,346 [wrapper] cleanup supervisor_pilot  611210 4168928
[2025-06-04 23:59:14] 2025-06-05 03:59:14,350 [wrapper] Test setup, not cleaning
[2025-06-04 23:59:14] 2025-06-05 03:59:14,353 [wrapper] apfmon messages muted
[2025-06-04 23:59:14] 2025-06-05 03:59:14,356 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:59:14] 2025-06-05 03:59:14,359 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:59:14]  *** Error codes and diagnostics ***
[2025-06-04 23:59:14]     "exeErrorCode": 0,
[2025-06-04 23:59:14]     "exeErrorDiag": "",
[2025-06-04 23:59:14]     "pilotErrorCode": 0,
[2025-06-04 23:59:14]     "pilotErrorDiag": "",
[2025-06-04 23:59:14]  *** Listing of results directory ***
[2025-06-04 23:59:14] total 407836
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas    495897 May 28 13:15 pilot3.tar.gz
[2025-06-04 23:59:14] -rwx------. 1 boincer umatlas     37140 May 28 13:24 runpilot2-wrapper.sh
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas      5111 May 28 13:24 queuedata.json
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas       100 Jun  4 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:59:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 22:04 run_atlas
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas       105 Jun  4 22:04 job.xml
[2025-06-04 23:59:14] -rw-r--r--. 2 boincer umatlas 221849303 Jun  4 22:04 EVNT.44871834._000717.pool.root.1
[2025-06-04 23:59:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:04 start_atlas.sh
[2025-06-04 23:59:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 22:04 shared
[2025-06-04 23:59:14] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 22:04 input.tar.gz
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas         0 Jun  4 22:04 boinc_lockfile
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 22:04 pandaJob.out
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas    987109 Jun  4 22:05 agis_schedconf.cvmfs.json
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas   1598969 Jun  4 22:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:59:14] drwx------. 4 boincer umatlas      4096 Jun  4 22:05 pilot3
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas      6934 Jun  4 23:56 init_data.xml
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas        95 Jun  4 23:58 pilot_heartbeat.json
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas 190030585 Jun  4 23:58 HITS.44871837._087808.pool.root.1
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas       529 Jun  4 23:58 boinc_task_state.xml
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas      1032 Jun  4 23:58 memory_monitor_summary.json
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas    324945 Jun  4 23:58 log.44871837._087808.job.log.tgz.1
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas      7683 Jun  4 23:58 heartbeat.json
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas      5007 Jun  4 23:59 pilotlog.txt
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas        27 Jun  4 23:59 wrapper_checkpoint.txt
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas    630306 Jun  4 23:59 log.44871837._087808.job.log.1
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas       357 Jun  4 23:59 output.list
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas       620 Jun  4 23:59 runtime_log
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas    972800 Jun  4 23:59 result.tar.gz
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 23:59 runtime_log.err
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas       651 Jun  4 23:59 e3UKDmIhZe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEgcKDmexPfsm.diag
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 23:59 boinc_mmap_file
[2025-06-04 23:59:14] -rw-r--r--. 1 boincer umatlas     20868 Jun  4 23:59 stderr.txt
[2025-06-04 23:59:14] HITS file was successfully produced:
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas 190030585 Jun  4 23:58 shared/HITS.pool.root.1
[2025-06-04 23:59:14]  *** Contents of shared directory: ***
[2025-06-04 23:59:14] total 403708
[2025-06-04 23:59:14] -rw-r--r--. 2 boincer umatlas 221849303 Jun  4 22:04 ATLAS.root_0
[2025-06-04 23:59:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:04 start_atlas.sh
[2025-06-04 23:59:14] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 22:04 input.tar.gz
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas 190030585 Jun  4 23:58 HITS.pool.root.1
[2025-06-04 23:59:14] -rw-------. 1 boincer umatlas    972800 Jun  4 23:59 result.tar.gz
23:59:16 (4164702): run_atlas exited; CPU time 42177.333621
23:59:16 (4164702): called boinc_finish(0)

</stderr_txt>
]]>

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