Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:59:23 (2017595): wrapper (7.7.26015): starting
21:59:23 (2017595): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 21:59:23] Arguments: --nthreads 12
[2025-06-04 21:59:23] Threads: 12
[2025-06-04 21:59:23] Checking for CVMFS
[2025-06-04 21:59:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:59:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:59:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:59:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:59:23] 2.12.6.0 7432 624 137172 146800 3 622 19893666 25181184 13960 16776704 0 1222259 98.878 3610527 22967 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 21:59:23] CVMFS is ok
[2025-06-04 21:59:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:59:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:59:23] Further information can be found at the LHC@home message board.
[2025-06-04 21:59:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:59:23] Checking for apptainer binary...
[2025-06-04 21:59:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:59:23] Running /usr/bin/apptainer --version
[2025-06-04 21:59:24] apptainer version 1.4.1-1.el9
[2025-06-04 21:59:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:59:24] c-16-35.aglt2.org
[2025-06-04 21:59:24] apptainer works
[2025-06-04 21:59:24] Set ATHENA_PROC_NUMBER=12
[2025-06-04 21:59:24] Set ATHENA_CORE_NUMBER=12
[2025-06-04 21:59:24] Starting ATLAS job with PandaID=6667440191
[2025-06-04 21:59:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:28:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:28:50] 2025-06-05 07:28:32,815 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667440191/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:28:50] 2025-06-05 07:28:32,816 | INFO     | extracted standard info from prmon json
[2025-06-05 03:28:50] 2025-06-05 07:28:32,816 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:28:50] 2025-06-05 07:28:32,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:28:50] 2025-06-05 07:28:32,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:28:50] 2025-06-05 07:28:32,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:28:50] 2025-06-05 07:28:32,844 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:28:50] 2025-06-05 07:28:32,849 | INFO     | sum of square deviations: 10449463293.467499
[2025-06-05 03:28:50] 2025-06-05 07:28:32,855 | INFO     | sum of deviations: 55162609725.03096
[2025-06-05 03:28:50] 2025-06-05 07:28:32,856 | INFO     | mean x: 1749098635.7027864
[2025-06-05 03:28:50] 2025-06-05 07:28:32,856 | INFO     | mean y: 2309424.854489164
[2025-06-05 03:28:50] 2025-06-05 07:28:32,856 | INFO     | -- intersect: -9231164362.471468
[2025-06-05 03:28:50] 2025-06-05 07:28:32,856 | INFO     | intersect: -9231164362.471468
[2025-06-05 03:28:50] 2025-06-05 07:28:32,863 | INFO     | chi2: 2.558984687865013
[2025-06-05 03:28:50] 2025-06-05 07:28:32,864 | INFO     | sum of square deviations: 9971727242.883564
[2025-06-05 03:28:50] 2025-06-05 07:28:32,867 | INFO     | sum of deviations: 77421051601.5535
[2025-06-05 03:28:50] 2025-06-05 07:28:32,875 | INFO     | mean x: 1749098483.210692
[2025-06-05 03:28:50] 2025-06-05 07:28:32,876 | INFO     | mean y: 2316454.4842767296
[2025-06-05 03:28:50] 2025-06-05 07:28:32,876 | INFO     | -- intersect: -13577782622.282576
[2025-06-05 03:28:50] 2025-06-05 07:28:32,876 | INFO     | intersect: -13577782622.282576
[2025-06-05 03:28:50] 2025-06-05 07:28:32,880 | INFO     | chi2: 1.854775171067381
[2025-06-05 03:28:50] 2025-06-05 07:28:32,880 | INFO     | current chi2=1.854775171067381 (change=27.51909849781717 %)
[2025-06-05 03:28:50] 2025-06-05 07:28:32,881 | INFO     | sum of square deviations: 9508704696.95843
[2025-06-05 03:28:50] 2025-06-05 07:28:32,887 | INFO     | sum of deviations: 80118443516.94252
[2025-06-05 03:28:50] 2025-06-05 07:28:32,888 | INFO     | mean x: 1749098330.7060702
[2025-06-05 03:28:50] 2025-06-05 07:28:32,895 | INFO     | mean y: 2317341.9776357827
[2025-06-05 03:28:50] 2025-06-05 07:28:32,895 | INFO     | -- intersect: -14735235277.4741
[2025-06-05 03:28:50] 2025-06-05 07:28:32,896 | INFO     | intersect: -14735235277.4741
[2025-06-05 03:28:50] 2025-06-05 07:28:32,896 | INFO     | chi2: 1.8434158034574537
[2025-06-05 03:28:50] 2025-06-05 07:28:32,896 | INFO     | current chi2=1.8434158034574537 (change=0.6124390593060519 %)
[2025-06-05 03:28:50] 2025-06-05 07:28:32,897 | INFO     | right removable region: 312
[2025-06-05 03:28:50] 2025-06-05 07:28:32,897 | INFO     | sum of square deviations: 9971608353.459118
[2025-06-05 03:28:50] 2025-06-05 07:28:32,905 | INFO     | sum of deviations: -2796992244.33333
[2025-06-05 03:28:50] 2025-06-05 07:28:32,905 | INFO     | mean x: 1749098788.2138364
[2025-06-05 03:28:50] 2025-06-05 07:28:32,905 | INFO     | mean y: 2327841.1666666665
[2025-06-05 03:28:50] 2025-06-05 07:28:32,905 | INFO     | -- intersect: 492942351.06263876
[2025-06-05 03:28:50] 2025-06-05 07:28:32,906 | INFO     | intersect: 492942351.06263876
[2025-06-05 03:28:50] 2025-06-05 07:28:32,906 | INFO     | chi2: 0.8669884636101589
[2025-06-05 03:28:50] 2025-06-05 07:28:32,906 | INFO     | current chi2=0.8669884636101589 (change=66.11982604970193 %)
[2025-06-05 03:28:50] 2025-06-05 07:28:32,907 | INFO     | sum of square deviations: 9508544388.370556
[2025-06-05 03:28:50] 2025-06-05 07:28:32,911 | INFO     | sum of deviations: -9779012958.159748
[2025-06-05 03:28:50] 2025-06-05 07:28:32,911 | INFO     | mean x: 1749098940.7252395
[2025-06-05 03:28:50] 2025-06-05 07:28:32,911 | INFO     | mean y: 2330129.463258786
[2025-06-05 03:28:50] 2025-06-05 07:28:32,911 | INFO     | -- intersect: 1801181826.1935441
[2025-06-05 03:28:50] 2025-06-05 07:28:32,911 | INFO     | intersect: 1801181826.1935441
[2025-06-05 03:28:50] 2025-06-05 07:28:32,912 | INFO     | chi2: 0.8410828923093427
[2025-06-05 03:28:50] 2025-06-05 07:28:32,912 | INFO     | current chi2=0.8410828923093427 (change=2.9879949259007206 %)
[2025-06-05 03:28:50] 2025-06-05 07:28:32,912 | INFO     | left removable region: 20
[2025-06-05 03:28:50] 2025-06-05 07:28:32,913 | INFO     | sum of square deviations: 7720158640.246624
[2025-06-05 03:28:50] 2025-06-05 07:28:32,916 | INFO     | sum of deviations: 11015046858.164377
[2025-06-05 03:28:50] 2025-06-05 07:28:32,916 | INFO     | mean x: 1749098910.2465754
[2025-06-05 03:28:50] 2025-06-05 07:28:32,916 | INFO     | mean y: 2340999.664383562
[2025-06-05 03:28:50] 2025-06-05 07:28:32,916 | INFO     | -- intersect: -2493256222.326744
[2025-06-05 03:28:50] 2025-06-05 07:28:32,917 | INFO     | intersect: -2493256222.326744
[2025-06-05 03:28:50] 2025-06-05 07:28:32,917 | INFO     | chi2: 0.08839582833134976
[2025-06-05 03:28:50] 2025-06-05 07:28:32,918 | INFO     | -- intersect: -2493256222.326744
[2025-06-05 03:28:50] 2025-06-05 07:28:32,918 | INFO     | current memory leak: 1.43 B/s (using 292 data points, chi2=0.09)
[2025-06-05 03:28:50] 2025-06-05 07:28:32,920 | INFO     | ..............................
[2025-06-05 03:28:50] 2025-06-05 07:28:32,920 | INFO     | . Timing measurements:
[2025-06-05 03:28:50] 2025-06-05 07:28:32,920 | INFO     | . get job = 0 s
[2025-06-05 03:28:50] 2025-06-05 07:28:32,920 | INFO     | . initial setup = 3 s
[2025-06-05 03:28:50] 2025-06-05 07:28:32,920 | INFO     | . payload setup = 13 s
[2025-06-05 03:28:50] 2025-06-05 07:28:32,920 | INFO     | . stage-in = 0 s
[2025-06-05 03:28:50] 2025-06-05 07:28:32,924 | INFO     | . payload execution = 19679 s
[2025-06-05 03:28:50] 2025-06-05 07:28:32,924 | INFO     | . stage-out = 5 s
[2025-06-05 03:28:50] 2025-06-05 07:28:32,924 | INFO     | . log creation = 0 s
[2025-06-05 03:28:50] 2025-06-05 07:28:32,925 | INFO     | ..............................
[2025-06-05 03:28:50] 2025-06-05 07:28:33,492 | INFO     | 
[2025-06-05 03:28:50] 2025-06-05 07:28:33,492 | INFO     | job summary report
[2025-06-05 03:28:50] 2025-06-05 07:28:33,493 | INFO     | --------------------------------------------------
[2025-06-05 03:28:50] 2025-06-05 07:28:33,493 | INFO     | PanDA job id: 6667440191
[2025-06-05 03:28:50] 2025-06-05 07:28:33,493 | INFO     | task id: 44871837
[2025-06-05 03:28:50] 2025-06-05 07:28:33,493 | INFO     | errors: (none)
[2025-06-05 03:28:50] 2025-06-05 07:28:33,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:28:50] 2025-06-05 07:28:33,493 | INFO     | pilot state: finished 
[2025-06-05 03:28:50] 2025-06-05 07:28:33,493 | INFO     | transexitcode: 0
[2025-06-05 03:28:50] 2025-06-05 07:28:33,493 | INFO     | exeerrorcode: 0
[2025-06-05 03:28:50] 2025-06-05 07:28:33,494 | INFO     | exeerrordiag: 
[2025-06-05 03:28:50] 2025-06-05 07:28:33,494 | INFO     | exitcode: 0
[2025-06-05 03:28:50] 2025-06-05 07:28:33,494 | INFO     | exitmsg: OK
[2025-06-05 03:28:50] 2025-06-05 07:28:33,494 | INFO     | cpuconsumptiontime: 76577 s
[2025-06-05 03:28:50] 2025-06-05 07:28:33,494 | INFO     | nevents: 400
[2025-06-05 03:28:50] 2025-06-05 07:28:33,494 | INFO     | neventsw: 0
[2025-06-05 03:28:50] 2025-06-05 07:28:33,494 | INFO     | pid: 2037852
[2025-06-05 03:28:50] 2025-06-05 07:28:33,494 | INFO     | pgrp: 2037852
[2025-06-05 03:28:50] 2025-06-05 07:28:33,495 | INFO     | corecount: 12
[2025-06-05 03:28:50] 2025-06-05 07:28:33,495 | INFO     | event service: False
[2025-06-05 03:28:50] 2025-06-05 07:28:33,495 | INFO     | sizes: {0: 2397221, 1: 2397420, 6: 2397626, 12: 2397654, 19697: 2430278, 19703: 2439219, 19706: 2439403, 19719: 2439573}
[2025-06-05 03:28:50] 2025-06-05 07:28:33,495 | INFO     | --------------------------------------------------
[2025-06-05 03:28:50] 2025-06-05 07:28:33,495 | INFO     | 
[2025-06-05 03:28:50] 2025-06-05 07:28:33,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 03:28:50] 2025-06-05 07:28:33,625 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,626 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,626 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,626 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,626 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,626 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:28:50] 2025-06-05 07:28:33,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,628 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:28:50] 2025-06-05 07:28:33,628 | INFO     | job 6667440191 has completed (purged errors)
[2025-06-05 03:28:50] 2025-06-05 07:28:33,628 | INFO     | overall cleanup function is called
[2025-06-05 03:28:50] 2025-06-05 07:28:34,641 | INFO     | --- collectZombieJob: --- 10, [2037852]
[2025-06-05 03:28:50] 2025-06-05 07:28:34,641 | INFO     | zombie collector waiting for pid 2037852
[2025-06-05 03:28:50] 2025-06-05 07:28:34,642 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:28:50] 2025-06-05 07:28:34,642 | INFO     | collected zombie processes
[2025-06-05 03:28:50] 2025-06-05 07:28:34,642 | INFO     | will attempt to kill all subprocesses of pid=2037852
[2025-06-05 03:28:50] 2025-06-05 07:28:35,449 | INFO     | process IDs to be killed: [2037852] (in reverse order)
[2025-06-05 03:28:50] 2025-06-05 07:28:35,618 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:28:50] 2025-06-05 07:28:35,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:28:50] 2025-06-05 07:28:35,637 | INFO     | did not find any defunct processes belonging to 2037852
[2025-06-05 03:28:50] 2025-06-05 07:28:35,655 | INFO     | did not find any defunct processes belonging to 2037852
[2025-06-05 03:28:50] 2025-06-05 07:28:35,655 | INFO     | ready for new job
[2025-06-05 03:28:50] 2025-06-05 07:28:35,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:28:50] 2025-06-05 07:28:35,663 | INFO     | **************************************
[2025-06-05 03:28:50] 2025-06-05 07:28:35,663 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:28:50] 2025-06-05 07:28:35,663 | INFO     | **************************************
[2025-06-05 03:28:50] 2025-06-05 07:28:35,663 | INFO     | 
[2025-06-05 03:28:50] 2025-06-05 07:28:35,680 | INFO     | architecture information:
[2025-06-05 03:28:50] 2025-06-05 07:28:35,694 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:28:50] 2025-06-05 07:28:35,748 | INFO     | cat /etc/os-release:
[2025-06-05 03:28:50] NAME="CentOS Linux"
[2025-06-05 03:28:50] VERSION="7 (Core)"
[2025-06-05 03:28:50] ID="centos"
[2025-06-05 03:28:50] ID_LIKE="rhel fedora"
[2025-06-05 03:28:50] VERSION_ID="7"
[2025-06-05 03:28:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:28:50] ANSI_COLOR="0;31"
[2025-06-05 03:28:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:28:50] HOME_URL="https://www.centos.org/"
[2025-06-05 03:28:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:28:50] 
[2025-06-05 03:28:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:28:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:28:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:28:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:28:50] 
[2025-06-05 03:28:50] 2025-06-05 07:28:35,749 | INFO     | **************************************
[2025-06-05 03:28:50] 2025-06-05 07:28:36,252 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 03:28:50] 2025-06-05 07:28:36,293 | INFO     | sufficient remaining disk space (64550338560 B)
[2025-06-05 03:28:50] 2025-06-05 07:28:36,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:28:50] 2025-06-05 07:28:36,293 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:28:50] 2025-06-05 07:28:36,294 | INFO     | update_server=False
[2025-06-05 03:28:50] 2025-06-05 07:28:36,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:28:50] 2025-06-05 07:28:36,294 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:28:50] 2025-06-05 07:28:36,294 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:28:50] 2025-06-05 07:28:36,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:28:50] 2025-06-05 07:28:36,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:28:50] 2025-06-05 07:28:36,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:28:50] 2025-06-05 07:28:37,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:28:50] 2025-06-05 07:28:37,248 | INFO     | aborting loop
[2025-06-05 03:28:50] 2025-06-05 07:28:37,276 | INFO     | all data control threads have been joined
[2025-06-05 03:28:50] 2025-06-05 07:28:37,304 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:37,443 | INFO     | all payload control threads have been joined
[2025-06-05 03:28:50] 2025-06-05 07:28:37,489 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:37,536 | INFO     | all job control threads have been joined
[2025-06-05 03:28:50] 2025-06-05 07:28:37,537 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:37,839 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:37,856 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,042 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:28:50] 2025-06-05 07:28:38,253 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,285 | INFO     | [data] control thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,314 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,422 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,432 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,449 | INFO     | [payload] control thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,544 | INFO     | [job] control thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:38,545 | INFO     | [job] validate thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:39,226 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:39,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:28:50] 2025-06-05 07:28:43,728 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:28:50] 2025-06-05 07:28:43,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003981178688)>', '<ExcThread(monitor, started 140003476743936)>']
[2025-06-05 03:28:50] 2025-06-05 07:28:44,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:28:50] 2025-06-05 07:28:44,342 | INFO     | [monitor] control thread has ended
[2025-06-05 03:28:50] 2025-06-05 07:28:48,919 | INFO     | all workflow threads have been joined
[2025-06-05 03:28:50] 2025-06-05 07:28:48,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:28:50] 2025-06-05 07:28:48,920 | INFO     | traces error code: 0
[2025-06-05 03:28:50] 2025-06-05 07:28:48,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:28:50] 2025-06-05 07:28:49,943 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:28:50] 2025-06-05 07:28:49,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:28:50] 2025-06-05 07:28:49,984 [wrapper] pilotpid: 2021238
[2025-06-05 03:28:50] 2025-06-05 07:28:50,009 [wrapper] Pilot exit status: 0
[2025-06-05 03:28:50] 2025-06-05 07:28:50,248 [wrapper] pandaids: 6667440191
[2025-06-05 03:28:50] 2025-06-05 07:28:50,343 [wrapper] cleanup supervisor_pilot 3301122 2021239
[2025-06-05 03:28:50] 2025-06-05 07:28:50,358 [wrapper] Test setup, not cleaning
[2025-06-05 03:28:50] 2025-06-05 07:28:50,361 [wrapper] apfmon messages muted
[2025-06-05 03:28:50] 2025-06-05 07:28:50,369 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:28:50] 2025-06-05 07:28:50,372 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:28:50]  *** Error codes and diagnostics ***
[2025-06-05 03:28:50]     "exeErrorCode": 0,
[2025-06-05 03:28:50]     "exeErrorDiag": "",
[2025-06-05 03:28:50]     "pilotErrorCode": 0,
[2025-06-05 03:28:50]     "pilotErrorDiag": "",
[2025-06-05 03:28:50]  *** Listing of results directory ***
[2025-06-05 03:28:50] total 418040
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas    495897 May 27 15:34 pilot3.tar.gz
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas      5111 May 27 16:00 queuedata.json
[2025-06-05 03:28:50] -rwx------. 1 boincer umatlas     37140 May 27 16:03 runpilot2-wrapper.sh
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas       100 Jun  4 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:28:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 21:59 run_atlas
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas       105 Jun  4 21:59 job.xml
[2025-06-05 03:28:50] -rw-r--r--. 2 boincer umatlas 221887421 Jun  4 21:59 EVNT.44871834._002856.pool.root.1
[2025-06-05 03:28:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:59 start_atlas.sh
[2025-06-05 03:28:50] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 21:59 shared
[2025-06-05 03:28:50] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 21:59 input.tar.gz
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas         0 Jun  4 21:59 boinc_lockfile
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 21:59 pandaJob.out
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas    987109 Jun  4 21:59 agis_schedconf.cvmfs.json
[2025-06-05 03:28:50] drwx------. 4 boincer umatlas      4096 Jun  4 21:59 pilot3
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas      6611 Jun  5 03:21 init_data.xml
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas 198342180 Jun  5 03:27 HITS.44871837._072747.pool.root.1
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas       531 Jun  5 03:27 boinc_task_state.xml
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas      1043 Jun  5 03:28 memory_monitor_summary.json
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas   1598969 Jun  5 03:28 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas    498444 Jun  5 03:28 log.44871837._072747.job.log.tgz.1
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas        95 Jun  5 03:28 pilot_heartbeat.json
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas      7727 Jun  5 03:28 heartbeat.json
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 03:28 boinc_mmap_file
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas        28 Jun  5 03:28 wrapper_checkpoint.txt
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas      4476 Jun  5 03:28 pilotlog.txt
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas   1509791 Jun  5 03:28 log.44871837._072747.job.log.1
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas       357 Jun  5 03:28 output.list
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas       620 Jun  5 03:28 runtime_log
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas   2027520 Jun  5 03:28 result.tar.gz
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas       656 Jun  5 03:28 VqTKDmohFe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcIaKDmAxKz7m.diag
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas      8657 Jun  5 03:28 runtime_log.err
[2025-06-05 03:28:50] -rw-r--r--. 1 boincer umatlas     20944 Jun  5 03:28 stderr.txt
[2025-06-05 03:28:50] HITS file was successfully produced:
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas 198342180 Jun  5 03:27 shared/HITS.pool.root.1
[2025-06-05 03:28:50]  *** Contents of shared directory: ***
[2025-06-05 03:28:50] total 412884
[2025-06-05 03:28:50] -rw-r--r--. 2 boincer umatlas 221887421 Jun  4 21:59 ATLAS.root_0
[2025-06-05 03:28:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:59 start_atlas.sh
[2025-06-05 03:28:50] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 21:59 input.tar.gz
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas 198342180 Jun  5 03:27 HITS.pool.root.1
[2025-06-05 03:28:50] -rw-------. 1 boincer umatlas   2027520 Jun  5 03:28 result.tar.gz
03:28:52 (2017595): run_atlas exited; CPU time 77294.852420
03:28:52 (2017595): called boinc_finish(0)

</stderr_txt>
]]>

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