Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
13:37:45 (3774148): wrapper (7.7.26015): starting
13:37:45 (3774148): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 13:37:45] Arguments: --nthreads 4
[2025-06-05 13:37:45] Threads: 4
[2025-06-05 13:37:45] Checking for CVMFS
[2025-06-05 13:37:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:37:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:37:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:37:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:37:45] 2.12.7.0 277841 3862 53212 146818 2 55 4069648 6144000 917 130560 1 10198316 99.997 916605 3397 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-06-05 13:37:45] CVMFS is ok
[2025-06-05 13:37:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:37:45] Checking for apptainer binary...
[2025-06-05 13:37:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:37:45] Running /usr/bin/apptainer --version
[2025-06-05 13:37:45] apptainer version 1.4.0
[2025-06-05 13:37:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:37:45] Ryzen8
[2025-06-05 13:37:45] apptainer works
[2025-06-05 13:37:45] Set ATHENA_PROC_NUMBER=4
[2025-06-05 13:37:45] Set ATHENA_CORE_NUMBER=4
[2025-06-05 13:37:45] Starting ATLAS job with PandaID=6668689338
[2025-06-05 13:37:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:07:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:07:38]  status=None
[2025-06-05 15:07:38]  status_code=0
[2025-06-05 15:07:38]  storage_token=
[2025-06-05 15:07:38]  surl=/var/lib/boinc2/slots/0/PanDA_Pilot-6668689338/log.44871837._087476.job.log.tgz.1
[2025-06-05 15:07:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/c3/log.44871837._087476.job.log.tgz.1
[2025-06-05 15:07:38]  workdir=None
[2025-06-05 15:07:38] ]
[2025-06-05 15:07:38] 2025-06-05 13:07:21,017 | INFO     | transferring file log.44871837._087476.job.log.tgz.1 from /var/lib/boinc2/slots/0/PanDA_Pilot-6668689338/log.44871837._087476.job.log.tgz.1 to /var/lib/boinc2/slot
[2025-06-05 15:07:38] 2025-06-05 13:07:21,017 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc2/slots/0/PanDA_Pilot-6668689338/log.44871837._087476.job.log.tgz.1 /var/lib/boinc2/slots/0/log.44871837._087476.j
[2025-06-05 15:07:38] 2025-06-05 13:07:21,025 | INFO     | adding to output.list: log.44871837._087476.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/c3/log.44871837._087476.job.log.tg
[2025-06-05 15:07:38] 2025-06-05 13:07:21,026 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 15:07:38] 2025-06-05 13:07:21,026 | INFO     | summary of transferred files:
[2025-06-05 15:07:38] 2025-06-05 13:07:21,026 | INFO     |  -- lfn=log.44871837._087476.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 15:07:38] 2025-06-05 13:07:21,026 | INFO     | stage-out finished correctly
[2025-06-05 15:07:38] 2025-06-05 13:07:22,937 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 15:07:38] 2025-06-05 13:07:22,962 | INFO     | job 6668689338 has state=finished
[2025-06-05 15:07:38] 2025-06-05 13:07:22,962 | INFO     | preparing for final server update for job 6668689338 in state='finished'
[2025-06-05 15:07:38] 2025-06-05 13:07:22,962 | INFO     | this job has now completed (state=finished)
[2025-06-05 15:07:38] 2025-06-05 13:07:22,962 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 15:07:38] 2025-06-05 13:07:22,962 | INFO     | log transfer has been attempted: DONE
[2025-06-05 15:07:38] 2025-06-05 13:07:22,962 | INFO     | job 6668689338 has finished - writing final server update
[2025-06-05 15:07:38] 2025-06-05 13:07:22,963 | INFO     | total number of processed events: 400 (read)
[2025-06-05 15:07:38] 2025-06-05 13:07:22,963 | INFO     | executing command: lscpu
[2025-06-05 15:07:38] 2025-06-05 13:07:22,975 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 15:07:38] 2025-06-05 13:07:23,124 | WARNING  | process 3784265 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 15:07:38] 2025-06-05 13:07:23,124 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6668689338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:07:38] 2025-06-05 13:07:23,124 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6668689338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:07:38] 2025-06-05 13:07:23,124 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1958046 B
[2025-06-05 15:07:38] 2025-06-05 13:07:23,124 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15305 B
[2025-06-05 15:07:38] 2025-06-05 13:07:23,125 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-05 15:07:38] 2025-06-05 13:07:23,521 | INFO     | PID=3777780 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 15:07:38] 2025-06-05 13:07:23,521 | INFO     | .. there are 2 such processes running
[2025-06-05 15:07:38] 2025-06-05 13:07:25,913 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 15:07:38] 2025-06-05 13:07:25,913 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6668689338/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,915 | INFO     | extracted standard info from prmon json
[2025-06-05 15:07:38] 2025-06-05 13:07:25,916 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:07:38] 2025-06-05 13:07:25,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:07:38] 2025-06-05 13:07:25,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:07:38] 2025-06-05 13:07:25,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | sum of square deviations: 164765880.0
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | sum of deviations: -5291409010.000004
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | mean x: 1749126231.0
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | mean y: 2447410.3209876544
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | -- intersect: 56175134973.67298
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | intersect: 56175134973.67298
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | chi2: 0.02120934475774451
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | -- intersect: 56175134973.67298
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | current memory leak: -32.11 B/s (using 81 data points, chi2=0.02)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | ..............................
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | . Timing measurements:
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | . get job = 0 s
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | . initial setup = 0 s
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | . payload setup = 2 s
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | . stage-in = 0 s
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | . payload execution = 5352 s
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | . stage-out = 0 s
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | . log creation = 0 s
[2025-06-05 15:07:38] 2025-06-05 13:07:25,917 | INFO     | ..............................
[2025-06-05 15:07:38] 2025-06-05 13:07:25,944 | INFO     | sufficient remaining disk space (111521300480 B)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,944 | INFO     | 
[2025-06-05 15:07:38] 2025-06-05 13:07:25,944 | INFO     | job summary report
[2025-06-05 15:07:38] 2025-06-05 13:07:25,944 | INFO     | --------------------------------------------------
[2025-06-05 15:07:38] 2025-06-05 13:07:25,944 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,944 | INFO     | PanDA job id: 6668689338
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | task id: 44871837
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | errors: (none)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | pilot state: finished 
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | transexitcode: 0
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | exeerrorcode: 0
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | exeerrordiag: 
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | exitcode: 0
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | exitmsg: OK
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | cpuconsumptiontime: 20699 s
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | nevents: 400
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | neventsw: 0
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | pid: 3784265
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | pgrp: 3784265
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | corecount: 4
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | event service: False
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | sizes: {0: 2397390, 2: 2397596, 11: 2397624, 5358: 2424148, 5360: 2433091, 5362: 2433147, 5365: 2433445}
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | --------------------------------------------------
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | 
[2025-06-05 15:07:38] 2025-06-05 13:07:25,945 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-06-05 15:07:38] 2025-06-05 13:07:25,948 | INFO     | size of work directory /var/lib/boinc2/slots/0/PanDA_Pilot-6668689338: 2259464 B (within 2537553920 B limit)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,948 | INFO     | pfn file=/var/lib/boinc2/slots/0/PanDA_Pilot-6668689338/HITS.44871837._087476.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,948 | INFO     | total size of present files: 0 B (workdir size: 2259464 B)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,948 | INFO     | output file size check: skipping output file /var/lib/boinc2/slots/0/PanDA_Pilot-6668689338/HITS.44871837._087476.pool.root.1 since it does not exist
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | job 6668689338 has completed (purged errors)
[2025-06-05 15:07:38] 2025-06-05 13:07:25,954 | INFO     | overall cleanup function is called
[2025-06-05 15:07:38] 2025-06-05 13:07:25,985 | INFO     | number of running child processes to parent process 3784265: 1
[2025-06-05 15:07:38] 2025-06-05 13:07:25,985 | INFO     | maximum number of monitored processes: 6
[2025-06-05 15:07:38] 2025-06-05 13:07:25,985 | INFO     | aborting job monitoring since job object (job id=6668689338) has expired
[2025-06-05 15:07:38] 2025-06-05 13:07:26,960 | INFO     | --- collectZombieJob: --- 10, [3784265]
[2025-06-05 15:07:38] 2025-06-05 13:07:26,960 | INFO     | zombie collector waiting for pid 3784265
[2025-06-05 15:07:38] 2025-06-05 13:07:26,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:07:38] 2025-06-05 13:07:26,960 | INFO     | collected zombie processes
[2025-06-05 15:07:38] 2025-06-05 13:07:26,960 | INFO     | will attempt to kill all subprocesses of pid=3784265
[2025-06-05 15:07:38] 2025-06-05 13:07:26,994 | INFO     | process IDs to be killed: [3784265] (in reverse order)
[2025-06-05 15:07:38] 2025-06-05 13:07:27,012 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:07:38] 2025-06-05 13:07:27,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:07:38] 2025-06-05 13:07:27,014 | INFO     | did not find any defunct processes belonging to 3784265
[2025-06-05 15:07:38] 2025-06-05 13:07:27,015 | INFO     | did not find any defunct processes belonging to 3784265
[2025-06-05 15:07:38] 2025-06-05 13:07:27,015 | INFO     | ready for new job
[2025-06-05 15:07:38] 2025-06-05 13:07:27,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:07:38] 2025-06-05 13:07:27,016 | INFO     | **************************************
[2025-06-05 15:07:38] 2025-06-05 13:07:27,016 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:07:38] 2025-06-05 13:07:27,016 | INFO     | **************************************
[2025-06-05 15:07:38] 2025-06-05 13:07:27,016 | INFO     | 
[2025-06-05 15:07:38] 2025-06-05 13:07:27,016 | INFO     | architecture information:
[2025-06-05 15:07:38] 2025-06-05 13:07:27,016 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:07:38] 2025-06-05 13:07:27,021 | INFO     | cat /etc/os-release:
[2025-06-05 15:07:38] NAME="CentOS Linux"
[2025-06-05 15:07:38] VERSION="7 (Core)"
[2025-06-05 15:07:38] ID="centos"
[2025-06-05 15:07:38] ID_LIKE="rhel fedora"
[2025-06-05 15:07:38] VERSION_ID="7"
[2025-06-05 15:07:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:07:38] ANSI_COLOR="0;31"
[2025-06-05 15:07:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:07:38] HOME_URL="https://www.centos.org/"
[2025-06-05 15:07:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:07:38] 
[2025-06-05 15:07:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:07:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:07:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:07:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:07:38] 
[2025-06-05 15:07:38] 2025-06-05 13:07:27,021 | INFO     | **************************************
[2025-06-05 15:07:38] 2025-06-05 13:07:27,523 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-05 15:07:38] 2025-06-05 13:07:27,529 | INFO     | sufficient remaining disk space (111523397632 B)
[2025-06-05 15:07:38] 2025-06-05 13:07:27,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:07:38] 2025-06-05 13:07:27,530 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:07:38] 2025-06-05 13:07:27,530 | INFO     | update_server=False
[2025-06-05 15:07:38] 2025-06-05 13:07:27,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:07:38] 2025-06-05 13:07:27,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:07:38] 2025-06-05 13:07:27,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:07:38] 2025-06-05 13:07:27,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:07:38] 2025-06-05 13:07:27,530 | INFO     | aborting loop
[2025-06-05 15:07:38] 2025-06-05 13:07:27,531 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:07:38] 2025-06-05 13:07:27,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:07:38] 2025-06-05 13:07:27,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:07:38] 2025-06-05 13:07:28,131 | INFO     | all data control threads have been joined
[2025-06-05 15:07:38] 2025-06-05 13:07:28,535 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:28,535 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:28,535 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:28,850 | INFO     | all payload control threads have been joined
[2025-06-05 15:07:38] 2025-06-05 13:07:28,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:28,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:07:38] 2025-06-05 13:07:29,028 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,036 | INFO     | all job control threads have been joined
[2025-06-05 15:07:38] 2025-06-05 13:07:29,133 | INFO     | [data] control thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,191 | INFO     | [job] validate thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,261 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,283 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,287 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,370 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,535 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,834 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:29,855 | INFO     | [payload] control thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:30,041 | INFO     | [job] control thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:32,973 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:07:38] 2025-06-05 13:07:33,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137879669434176)>', '<ExcThread(monitor, started 137879170832128)>']
[2025-06-05 15:07:38] 2025-06-05 13:07:33,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:07:38] 2025-06-05 13:07:33,553 | INFO     | [monitor] control thread has ended
[2025-06-05 15:07:38] 2025-06-05 13:07:38,527 | INFO     | all workflow threads have been joined
[2025-06-05 15:07:38] 2025-06-05 13:07:38,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:07:38] 2025-06-05 13:07:38,527 | INFO     | traces error code: 0
[2025-06-05 15:07:38] 2025-06-05 13:07:38,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:07:38] 2025-06-05 13:07:38,572 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:07:38] 2025-06-05 13:07:38,573 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:07:38] 2025-06-05 13:07:38,574 [wrapper] pilotpid: 3777780
[2025-06-05 15:07:38] 2025-06-05 13:07:38,575 [wrapper] Pilot exit status: 0
[2025-06-05 15:07:38] 2025-06-05 13:07:38,578 [wrapper] pandaids: 6668689338
[2025-06-05 15:07:38] 2025-06-05 13:07:38,590 [wrapper] cleanup supervisor_pilot 3822717 3777781
[2025-06-05 15:07:38] 2025-06-05 13:07:38,591 [wrapper] Test setup, not cleaning
[2025-06-05 15:07:38] 2025-06-05 13:07:38,592 [wrapper] apfmon messages muted
[2025-06-05 15:07:38] 2025-06-05 13:07:38,593 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:07:38] 2025-06-05 13:07:38,594 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:07:38]  *** Error codes and diagnostics ***
[2025-06-05 15:07:38]     "exeErrorCode": 0,
[2025-06-05 15:07:38]     "exeErrorDiag": "",
[2025-06-05 15:07:38]     "pilotErrorCode": 0,
[2025-06-05 15:07:38]     "pilotErrorDiag": "",
[2025-06-05 15:07:38]  *** Listing of results directory ***
[2025-06-05 15:07:38] insgesamt 434312
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc    495897 28. Mai 18:47 pilot3.tar.gz
[2025-06-05 15:07:38] -rwx------ 1 boinc boinc     37140 28. Mai 18:56 runpilot2-wrapper.sh
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc      5111 28. Mai 18:56 queuedata.json
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc       100  5. Jun 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:07:38] -rwxr-xr-x 1 boinc boinc      7986  5. Jun 13:37 run_atlas
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc       105  5. Jun 13:37 job.xml
[2025-06-05 15:07:38] -rw-r--r-- 2 boinc boinc     15093  5. Jun 13:37 start_atlas.sh
[2025-06-05 15:07:38] drwxrwx--x 2 boinc boinc      4096  5. Jun 13:37 shared
[2025-06-05 15:07:38] -rw-r--r-- 2 boinc boinc    508871  5. Jun 13:37 input.tar.gz
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc      9603  5. Jun 13:37 init_data.xml
[2025-06-05 15:07:38] -rw-r--r-- 2 boinc boinc 227594094  5. Jun 13:37 EVNT.44871834._003408.pool.root.1
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc         0  5. Jun 13:37 boinc_lockfile
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc      2557  5. Jun 13:37 pandaJob.out
[2025-06-05 15:07:38] -rw------- 1 boinc boinc    982836  5. Jun 13:37 agis_schedconf.cvmfs.json
[2025-06-05 15:07:38] -rw------- 1 boinc boinc   1598969  5. Jun 13:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:07:38] drwx------ 4 boinc boinc      4096  5. Jun 13:37 pilot3
[2025-06-05 15:07:38] -rw------- 1 boinc boinc 211777261  5. Jun 15:07 HITS.44871837._087476.pool.root.1
[2025-06-05 15:07:38] -rw------- 1 boinc boinc      1027  5. Jun 15:07 memory_monitor_summary.json
[2025-06-05 15:07:38] -rw------- 1 boinc boinc        95  5. Jun 15:07 pilot_heartbeat.json
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc      8192  5. Jun 15:07 boinc_mmap_file
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc        27  5. Jun 15:07 wrapper_checkpoint.txt
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc       529  5. Jun 15:07 boinc_task_state.xml
[2025-06-05 15:07:38] -rw------- 1 boinc boinc    233034  5. Jun 15:07 log.44871837._087476.job.log.tgz.1
[2025-06-05 15:07:38] -rw------- 1 boinc boinc      7667  5. Jun 15:07 heartbeat.json
[2025-06-05 15:07:38] -rw------- 1 boinc boinc      4355  5. Jun 15:07 pilotlog.txt
[2025-06-05 15:07:38] -rw------- 1 boinc boinc    533528  5. Jun 15:07 log.44871837._087476.job.log.1
[2025-06-05 15:07:38] -rw------- 1 boinc boinc       357  5. Jun 15:07 output.list
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc       620  5. Jun 15:07 runtime_log
[2025-06-05 15:07:38] -rw------- 1 boinc boinc    788480  5. Jun 15:07 result.tar.gz
[2025-06-05 15:07:38] -rw------- 1 boinc boinc       641  5. Jun 15:07 W0kKDmNGZe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPecKDm2fLrYm.diag
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc      8636  5. Jun 15:07 runtime_log.err
[2025-06-05 15:07:38] -rw-r--r-- 1 boinc boinc     21986  5. Jun 15:07 stderr.txt
[2025-06-05 15:07:38] HITS file was successfully produced:
[2025-06-05 15:07:38] -rw------- 1 boinc boinc 211777261  5. Jun 15:07 shared/HITS.pool.root.1
[2025-06-05 15:07:38]  *** Contents of shared directory: ***
[2025-06-05 15:07:38] insgesamt 430368
[2025-06-05 15:07:38] -rw-r--r-- 2 boinc boinc     15093  5. Jun 13:37 start_atlas.sh
[2025-06-05 15:07:38] -rw-r--r-- 2 boinc boinc    508871  5. Jun 13:37 input.tar.gz
[2025-06-05 15:07:38] -rw-r--r-- 2 boinc boinc 227594094  5. Jun 13:37 ATLAS.root_0
[2025-06-05 15:07:38] -rw------- 1 boinc boinc 211777261  5. Jun 15:07 HITS.pool.root.1
[2025-06-05 15:07:38] -rw------- 1 boinc boinc    788480  5. Jun 15:07 result.tar.gz
15:07:40 (3774148): run_atlas exited; CPU time 20730.929812
15:07:40 (3774148): called boinc_finish(0)

</stderr_txt>
]]>

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