Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:46 (19503): wrapper (7.7.26015): starting
14:35:46 (19503): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 14:35:46] Arguments: --nthreads 8
[2025-06-05 14:35:46] Threads: 8
[2025-06-05 14:35:46] Checking for CVMFS
[2025-06-05 14:35:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:35:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:35:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:35:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:35:48] 2.11.2.0 570 34656 94644 146819 2 59 23550725 25165825 3908 130560 0 17634046 99.808 20121109 1989 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 14:35:48] CVMFS is ok
[2025-06-05 14:35:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:35:48] Checking for apptainer binary...
[2025-06-05 14:35:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:35:48] Running /usr/bin/apptainer --version
[2025-06-05 14:35:48] apptainer version 1.3.2-1.el7
[2025-06-05 14:35:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:35:53] cg-vwn366.simple-grid.lan
[2025-06-05 14:35:53] apptainer works
[2025-06-05 14:35:53] Set ATHENA_PROC_NUMBER=8
[2025-06-05 14:35:53] Set ATHENA_CORE_NUMBER=8
[2025-06-05 14:35:54] Starting ATLAS job with PandaID=6668231937
[2025-06-05 14:35:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:13:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:13:26] 2025-06-05 18:02:05,540 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6668231937/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 20:13:26] 2025-06-05 18:02:05,541 | INFO     | extracted standard info from prmon json
[2025-06-05 20:13:26] 2025-06-05 18:02:05,541 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 20:13:26] 2025-06-05 18:02:05,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 20:13:26] 2025-06-05 18:02:05,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 20:13:26] 2025-06-05 18:02:05,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 20:13:26] 2025-06-05 18:02:05,553 | INFO     | fitting pss+swap vs Time
[2025-06-05 20:13:26] 2025-06-05 18:02:05,554 | INFO     | sum of square deviations: 9059954057.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,557 | INFO     | sum of deviations: 133478685675.00002
[2025-06-05 20:13:26] 2025-06-05 18:02:05,558 | INFO     | mean x: 1749137023.5
[2025-06-05 20:13:26] 2025-06-05 18:02:05,558 | INFO     | mean y: 2440583.7337662335
[2025-06-05 20:13:26] 2025-06-05 18:02:05,558 | INFO     | -- intersect: -25767282915.23625
[2025-06-05 20:13:26] 2025-06-05 18:02:05,558 | INFO     | intersect: -25767282915.23625
[2025-06-05 20:13:26] 2025-06-05 18:02:05,559 | INFO     | chi2: 7.37773809352121
[2025-06-05 20:13:26] 2025-06-05 18:02:05,559 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,562 | INFO     | sum of deviations: 151455084395.99997
[2025-06-05 20:13:26] 2025-06-05 18:02:05,563 | INFO     | mean x: 1749136871.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,563 | INFO     | mean y: 2446804.2541254126
[2025-06-05 20:13:26] 2025-06-05 18:02:05,563 | INFO     | -- intersect: -30709409907.726505
[2025-06-05 20:13:26] 2025-06-05 18:02:05,563 | INFO     | intersect: -30709409907.726505
[2025-06-05 20:13:26] 2025-06-05 18:02:05,564 | INFO     | chi2: 6.654017438432782
[2025-06-05 20:13:26] 2025-06-05 18:02:05,564 | INFO     | current chi2=6.654017438432782 (change=9.809519474864068 %)
[2025-06-05 20:13:26] 2025-06-05 18:02:05,564 | INFO     | right removable region: 302
[2025-06-05 20:13:26] 2025-06-05 18:02:05,564 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,567 | INFO     | sum of deviations: 27074036015.999996
[2025-06-05 20:13:26] 2025-06-05 18:02:05,568 | INFO     | mean x: 1749137176.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,568 | INFO     | mean y: 2477938.1551155117
[2025-06-05 20:13:26] 2025-06-05 18:02:05,568 | INFO     | -- intersect: -5487559342.820953
[2025-06-05 20:13:26] 2025-06-05 18:02:05,568 | INFO     | intersect: -5487559342.820953
[2025-06-05 20:13:26] 2025-06-05 18:02:05,568 | INFO     | chi2: 2.6366947247278327
[2025-06-05 20:13:26] 2025-06-05 18:02:05,568 | INFO     | current chi2=2.6366947247278327 (change=64.26147565412688 %)
[2025-06-05 20:13:26] 2025-06-05 18:02:05,569 | INFO     | sum of square deviations: 8205826414.5
[2025-06-05 20:13:26] 2025-06-05 18:02:05,579 | INFO     | sum of deviations: -34929535526.5
[2025-06-05 20:13:26] 2025-06-05 18:02:05,580 | INFO     | mean x: 1749137328.5
[2025-06-05 20:13:26] 2025-06-05 18:02:05,580 | INFO     | mean y: 2500375.8825503355
[2025-06-05 20:13:26] 2025-06-05 18:02:05,580 | INFO     | -- intersect: 7448009380.144226
[2025-06-05 20:13:26] 2025-06-05 18:02:05,580 | INFO     | intersect: 7448009380.144226
[2025-06-05 20:13:26] 2025-06-05 18:02:05,580 | INFO     | chi2: 0.9217093400298461
[2025-06-05 20:13:26] 2025-06-05 18:02:05,580 | INFO     | current chi2=0.9217093400298461 (change=65.04300132337136 %)
[2025-06-05 20:13:26] 2025-06-05 18:02:05,581 | INFO     | sum of square deviations: 7799669962.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,583 | INFO     | sum of deviations: -35755118280.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,584 | INFO     | mean x: 1749137481.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,584 | INFO     | mean y: 2500656.3412969285
[2025-06-05 20:13:26] 2025-06-05 18:02:05,584 | INFO     | -- intersect: 8020867821.341125
[2025-06-05 20:13:26] 2025-06-05 18:02:05,584 | INFO     | intersect: 8020867821.341125
[2025-06-05 20:13:26] 2025-06-05 18:02:05,584 | INFO     | chi2: 0.8918323690699292
[2025-06-05 20:13:26] 2025-06-05 18:02:05,585 | INFO     | current chi2=0.8918323690699292 (change=3.241474254665724 %)
[2025-06-05 20:13:26] 2025-06-05 18:02:05,585 | INFO     | left removable region: 30
[2025-06-05 20:13:26] 2025-06-05 18:02:05,585 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,588 | INFO     | sum of deviations: 7565727794.499999
[2025-06-05 20:13:26] 2025-06-05 18:02:05,588 | INFO     | mean x: 1749137755.5
[2025-06-05 20:13:26] 2025-06-05 18:02:05,588 | INFO     | mean y: 2498487.4889705884
[2025-06-05 20:13:26] 2025-06-05 18:02:05,588 | INFO     | -- intersect: -2118280736.2033486
[2025-06-05 20:13:26] 2025-06-05 18:02:05,588 | INFO     | intersect: -2118280736.2033486
[2025-06-05 20:13:26] 2025-06-05 18:02:05,589 | INFO     | chi2: 0.0011645856440567575
[2025-06-05 20:13:26] 2025-06-05 18:02:05,589 | INFO     | -- intersect: -2118280736.2033486
[2025-06-05 20:13:26] 2025-06-05 18:02:05,589 | INFO     | current memory leak: 1.21 B/s (using 272 data points, chi2=0.00)
[2025-06-05 20:13:26] 2025-06-05 18:02:05,590 | INFO     | ..............................
[2025-06-05 20:13:26] 2025-06-05 18:02:05,597 | INFO     | . Timing measurements:
[2025-06-05 20:13:26] 2025-06-05 18:02:05,597 | INFO     | . get job = 0 s
[2025-06-05 20:13:26] 2025-06-05 18:02:05,597 | INFO     | . initial setup = 11 s
[2025-06-05 20:13:26] 2025-06-05 18:02:05,597 | INFO     | . payload setup = 163 s
[2025-06-05 20:13:26] 2025-06-05 18:02:05,597 | INFO     | . stage-in = 0 s
[2025-06-05 20:13:26] 2025-06-05 18:02:05,597 | INFO     | . payload execution = 18921 s
[2025-06-05 20:13:26] 2025-06-05 18:02:05,597 | INFO     | . stage-out = 2 s
[2025-06-05 20:13:26] 2025-06-05 18:02:05,597 | INFO     | . log creation = 0 s
[2025-06-05 20:13:26] 2025-06-05 18:02:05,598 | INFO     | ..............................
[2025-06-05 20:13:26] 2025-06-05 18:02:05,790 | INFO     | 
[2025-06-05 20:13:26] 2025-06-05 18:02:05,790 | INFO     | job summary report
[2025-06-05 20:13:26] 2025-06-05 18:02:05,790 | INFO     | --------------------------------------------------
[2025-06-05 20:13:26] 2025-06-05 18:02:05,790 | INFO     | PanDA job id: 6668231937
[2025-06-05 20:13:26] 2025-06-05 18:02:05,790 | INFO     | task id: 44871837
[2025-06-05 20:13:26] 2025-06-05 18:02:05,790 | INFO     | errors: (none)
[2025-06-05 20:13:26] 2025-06-05 18:02:05,790 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:13:26] 2025-06-05 18:02:05,790 | INFO     | pilot state: finished 
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | transexitcode: 0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | exeerrorcode: 0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | exeerrordiag: 
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | exitcode: 0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | exitmsg: OK
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | cpuconsumptiontime: 70708 s
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | nevents: 400
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | neventsw: 0
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | pid: 1591
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | pgrp: 1591
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | corecount: 8
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | event service: False
[2025-06-05 20:13:26] 2025-06-05 18:02:05,791 | INFO     | sizes: {0: 2397164, 1: 2397419, 12: 2397419, 23: 2397447, 34: 2397475, 44: 2397503, 55: 2397659, 66: 2397687, 76: 2397715, 87: 2397771, 93: 2398005, 98: 2398313, 1
[2025-06-05 20:13:26] 2025-06-05 18:02:05,792 | INFO     | --------------------------------------------------
[2025-06-05 20:13:26] 2025-06-05 18:02:05,792 | INFO     | 
[2025-06-05 20:13:26] 2025-06-05 18:02:05,792 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-05 20:13:26] 2025-06-05 18:02:06,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:13:26] 2025-06-05 18:02:06,264 | INFO     | job 6668231937 has completed (purged errors)
[2025-06-05 20:13:26] 2025-06-05 18:02:06,265 | INFO     | overall cleanup function is called
[2025-06-05 20:13:26] 2025-06-05 18:02:07,275 | INFO     | --- collectZombieJob: --- 10, [1591]
[2025-06-05 20:13:26] 2025-06-05 18:02:07,275 | INFO     | zombie collector waiting for pid 1591
[2025-06-05 20:13:26] 2025-06-05 18:02:07,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:13:26] 2025-06-05 18:02:07,275 | INFO     | collected zombie processes
[2025-06-05 20:13:26] 2025-06-05 18:02:07,275 | INFO     | will attempt to kill all subprocesses of pid=1591
[2025-06-05 20:13:26] 2025-06-05 18:02:07,437 | INFO     | process IDs to be killed: [1591] (in reverse order)
[2025-06-05 20:13:26] 2025-06-05 18:02:08,473 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:13:26] 2025-06-05 18:02:08,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:13:26] 2025-06-05 18:02:08,477 | INFO     | did not find any defunct processes belonging to 1591
[2025-06-05 20:13:26] 2025-06-05 18:02:08,487 | INFO     | did not find any defunct processes belonging to 1591
[2025-06-05 20:13:26] 2025-06-05 18:02:08,487 | INFO     | ready for new job
[2025-06-05 20:13:26] 2025-06-05 18:02:08,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:13:26] 2025-06-05 18:02:08,490 | INFO     | **************************************
[2025-06-05 20:13:26] 2025-06-05 18:02:08,490 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:13:26] 2025-06-05 18:02:08,490 | INFO     | **************************************
[2025-06-05 20:13:26] 2025-06-05 18:02:08,490 | INFO     | 
[2025-06-05 20:13:26] 2025-06-05 18:02:08,491 | INFO     | pilot is running in a VM
[2025-06-05 20:13:26] 2025-06-05 18:02:08,491 | INFO     | architecture information:
[2025-06-05 20:13:26] 2025-06-05 18:02:08,507 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:13:26] 2025-06-05 18:02:08,676 | INFO     | cat /etc/os-release:
[2025-06-05 20:13:26] NAME="CentOS Linux"
[2025-06-05 20:13:26] VERSION="7 (Core)"
[2025-06-05 20:13:26] ID="centos"
[2025-06-05 20:13:26] ID_LIKE="rhel fedora"
[2025-06-05 20:13:26] VERSION_ID="7"
[2025-06-05 20:13:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:13:26] ANSI_COLOR="0;31"
[2025-06-05 20:13:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:13:26] HOME_URL="https://www.centos.org/"
[2025-06-05 20:13:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:13:26] 
[2025-06-05 20:13:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:13:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:13:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:13:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:13:26] 
[2025-06-05 20:13:26] 2025-06-05 18:02:08,677 | INFO     | **************************************
[2025-06-05 20:13:26] 2025-06-05 18:02:09,181 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-05 20:13:26] 2025-06-05 18:02:09,468 | INFO     | sufficient remaining disk space (496772317184 B)
[2025-06-05 20:13:26] 2025-06-05 18:02:09,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:13:26] 2025-06-05 18:02:09,469 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:13:26] 2025-06-05 18:02:09,469 | INFO     | update_server=False
[2025-06-05 20:13:26] 2025-06-05 18:02:09,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:13:26] 2025-06-05 18:02:09,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:13:26] 2025-06-05 18:02:09,473 | INFO     | aborting loop
[2025-06-05 20:13:26] 2025-06-05 18:02:09,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:13:26] 2025-06-05 18:02:09,696 | INFO     | all payload control threads have been joined
[2025-06-05 20:13:26] 2025-06-05 18:02:10,033 | INFO     | all data control threads have been joined
[2025-06-05 20:13:26] 2025-06-05 18:02:10,128 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:13:26] 2025-06-05 18:02:10,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:13:26] 2025-06-05 18:02:10,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:13:26] 2025-06-05 18:02:10,476 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:10,479 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:10,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:10,702 | INFO     | [payload] control thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:10,741 | INFO     | all job control threads have been joined
[2025-06-05 20:13:26] 2025-06-05 18:02:10,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:13:26] 2025-06-05 18:02:11,039 | INFO     | [data] control thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,125 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,221 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,343 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,383 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,481 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:13:26] 2025-06-05 18:02:11,746 | INFO     | [job] control thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,798 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,810 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,874 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:11,936 | INFO     | [job] validate thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:15,703 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:13:26] 2025-06-05 18:02:17,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958640408384)>', '<ExcThread(monitor, started 139958186653440)>']
[2025-06-05 20:13:26] 2025-06-05 18:02:18,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:13:26] 2025-06-05 18:02:18,175 | INFO     | [monitor] control thread has ended
[2025-06-05 20:13:26] 2025-06-05 18:02:22,831 | INFO     | all workflow threads have been joined
[2025-06-05 20:13:26] 2025-06-05 18:02:22,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:13:26] 2025-06-05 18:02:22,831 | INFO     | traces error code: 0
[2025-06-05 20:13:26] 2025-06-05 18:02:22,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:13:26] 2025-06-05 18:02:23,353 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:13:26] 2025-06-05 18:02:23,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:13:26] 2025-06-05 18:02:23,495 [wrapper] pilotpid: 23339
[2025-06-05 20:13:26] 2025-06-05 18:02:23,576 [wrapper] Pilot exit status: 0
[2025-06-05 20:13:26] 2025-06-05 18:02:23,891 [wrapper] pandaids: 6668231937
[2025-06-05 20:13:26] 2025-06-05 18:02:24,806 [wrapper] cleanup supervisor_pilot 17226 23340
[2025-06-05 20:13:26] 2025-06-05 18:02:24,881 [wrapper] Test setup, not cleaning
[2025-06-05 20:13:26] 2025-06-05 18:02:25,002 [wrapper] apfmon messages muted
[2025-06-05 20:13:26] 2025-06-05 18:02:25,106 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:13:26] 2025-06-05 18:02:25,203 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:13:26]  *** Error codes and diagnostics ***
[2025-06-05 20:13:26]     "exeErrorCode": 0,
[2025-06-05 20:13:26]     "exeErrorDiag": "",
[2025-06-05 20:13:26]     "pilotErrorCode": 0,
[2025-06-05 20:13:26]     "pilotErrorDiag": "",
[2025-06-05 20:13:26]  *** Listing of results directory ***
[2025-06-05 20:13:26] total 419964
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc    495897 May 28 10:01 pilot3.tar.gz
[2025-06-05 20:13:26] -rwx------. 1 boinc boinc     37140 May 28 10:12 runpilot2-wrapper.sh
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc      5111 May 28 10:12 queuedata.json
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc       100 Jun  5 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:13:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 14:35 run_atlas
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc       105 Jun  5 14:35 job.xml
[2025-06-05 20:13:26] -rw-r--r--. 2 boinc boinc 224032346 Jun  5 14:35 EVNT.44871834._003167.pool.root.1
[2025-06-05 20:13:26] -rw-r--r--. 2 boinc boinc    508875 Jun  5 14:35 input.tar.gz
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc      6391 Jun  5 14:35 init_data.xml
[2025-06-05 20:13:26] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:35 start_atlas.sh
[2025-06-05 20:13:26] drwxrwx--x. 2 boinc boinc        68 Jun  5 14:35 shared
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc         0 Jun  5 14:35 boinc_lockfile
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc      2558 Jun  5 14:35 pandaJob.out
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc    983210 Jun  5 14:39 agis_schedconf.cvmfs.json
[2025-06-05 20:13:26] drwx------. 4 boinc boinc      4096 Jun  5 14:39 pilot3
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc 198052761 Jun  5 19:59 HITS.44871837._081116.pool.root.1
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc       531 Jun  5 19:59 boinc_task_state.xml
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc      1016 Jun  5 20:00 memory_monitor_summary.json
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc   1598969 Jun  5 20:00 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc    428637 Jun  5 20:00 log.44871837._081116.job.log.tgz.1
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc        95 Jun  5 20:01 pilot_heartbeat.json
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc      7692 Jun  5 20:02 heartbeat.json
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc      4416 Jun  5 20:02 pilotlog.txt
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc   1639298 Jun  5 20:02 log.44871837._081116.job.log.1
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc       357 Jun  5 20:02 output.list
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc       620 Jun  5 20:02 runtime_log
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc   2088960 Jun  5 20:02 result.tar.gz
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc      8659 Jun  5 20:02 runtime_log.err
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc       657 Jun  5 20:02 A37MDmA5Qe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmscbKDmI7OfHo.diag
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc      8192 Jun  5 20:13 boinc_mmap_file
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc        28 Jun  5 20:13 wrapper_checkpoint.txt
[2025-06-05 20:13:26] -rw-r--r--. 1 boinc boinc     20526 Jun  5 20:13 stderr.txt
[2025-06-05 20:13:26] HITS file was successfully produced:
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc 198052761 Jun  5 19:59 shared/HITS.pool.root.1
[2025-06-05 20:13:26]  *** Contents of shared directory: ***
[2025-06-05 20:13:26] total 414752
[2025-06-05 20:13:26] -rw-r--r--. 2 boinc boinc 224032346 Jun  5 14:35 ATLAS.root_0
[2025-06-05 20:13:26] -rw-r--r--. 2 boinc boinc    508875 Jun  5 14:35 input.tar.gz
[2025-06-05 20:13:26] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:35 start_atlas.sh
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc 198052761 Jun  5 19:59 HITS.pool.root.1
[2025-06-05 20:13:26] -rw-------. 1 boinc boinc   2088960 Jun  5 20:02 result.tar.gz
20:13:28 (19503): run_atlas exited; CPU time 70964.794678
20:13:28 (19503): called boinc_finish(0)

</stderr_txt>
]]>

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