Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:41:22 (3848295): wrapper (7.7.26015): starting
05:41:22 (3848295): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 05:41:22] Arguments: --nthreads 4
[2025-06-05 05:41:22] Threads: 4
[2025-06-05 05:41:22] Checking for CVMFS
[2025-06-05 05:41:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:41:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:41:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:41:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:41:22] 2.9.2.0 2600721 3317 94680 146804 3 55 32595978 36864000 0 130560 0 3335223 99.993 832887 34024 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 05:41:22] CVMFS is ok
[2025-06-05 05:41:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:41:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:41:22] Further information can be found at the LHC@home message board.
[2025-06-05 05:41:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:41:22] Checking for apptainer binary...
[2025-06-05 05:41:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:41:22] Running /usr/bin/apptainer --version
[2025-06-05 05:41:22] apptainer version 1.3.6-6.1
[2025-06-05 05:41:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:41:22] thA314a
[2025-06-05 05:41:22] apptainer works
[2025-06-05 05:41:22] Set ATHENA_PROC_NUMBER=4
[2025-06-05 05:41:22] Set ATHENA_CORE_NUMBER=4
[2025-06-05 05:41:22] Starting ATLAS job with PandaID=6667924004
[2025-06-05 05:41:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:11:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:11:43]  guid=73d0eaef-8ca2-4d34-aedc-442406bb68c0
[2025-06-05 07:11:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 07:11:43]  is_altstaged=None
[2025-06-05 07:11:43]  is_tar=False
[2025-06-05 07:11:43]  lfn=log.44871837._078190.job.log.tgz.1
[2025-06-05 07:11:43]  mtime=0
[2025-06-05 07:11:43]  protocol_id=None
[2025-06-05 07:11:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 07:11:43]  replicas=None
[2025-06-05 07:11:43]  scope=mc23_13p6TeV
[2025-06-05 07:11:43]  status=None
[2025-06-05 07:11:43]  status_code=0
[2025-06-05 07:11:43]  storage_token=
[2025-06-05 07:11:43]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6667924004/log.44871837._078190.job.log.tgz.1
[2025-06-05 07:11:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/21/log.44871837._078190.job.log.tgz.1
[2025-06-05 07:11:43]  workdir=None
[2025-06-05 07:11:43] ]
[2025-06-05 07:11:43] 2025-06-05 05:11:17,755 | INFO     | transferring file log.44871837._078190.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6667924004/log.44871837._078190.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 07:11:43] 2025-06-05 05:11:17,755 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6667924004/log.44871837._078190.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0781
[2025-06-05 07:11:43] 2025-06-05 05:11:17,773 | INFO     | adding to output.list: log.44871837._078190.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/21/log.44871837._078190.job.log.tg
[2025-06-05 07:11:43] 2025-06-05 05:11:17,774 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 07:11:43] 2025-06-05 05:11:17,774 | INFO     | summary of transferred files:
[2025-06-05 07:11:43] 2025-06-05 05:11:17,774 | INFO     |  -- lfn=log.44871837._078190.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 07:11:43] 2025-06-05 05:11:17,774 | INFO     | stage-out finished correctly
[2025-06-05 07:11:43] 2025-06-05 05:11:17,810 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 07:11:43] 2025-06-05 05:11:19,615 | INFO     | job 6667924004 has state=finished
[2025-06-05 07:11:43] 2025-06-05 05:11:19,616 | INFO     | preparing for final server update for job 6667924004 in state='finished'
[2025-06-05 07:11:43] 2025-06-05 05:11:19,616 | INFO     | this job has now completed (state=finished)
[2025-06-05 07:11:43] 2025-06-05 05:11:19,616 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 07:11:43] 2025-06-05 05:11:19,616 | INFO     | log transfer has been attempted: DONE
[2025-06-05 07:11:43] 2025-06-05 05:11:19,616 | INFO     | job 6667924004 has finished - writing final server update
[2025-06-05 07:11:43] 2025-06-05 05:11:19,616 | INFO     | total number of processed events: 400 (read)
[2025-06-05 07:11:43] 2025-06-05 05:11:19,618 | INFO     | executing command: lscpu
[2025-06-05 07:11:43] 2025-06-05 05:11:19,639 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 07:11:43] 2025-06-05 05:11:22,669 | WARNING  | process 3858627 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 07:11:43] 2025-06-05 05:11:22,670 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667924004/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:11:43] 2025-06-05 05:11:22,717 | INFO     | number of running child processes to parent process 3858627: 1
[2025-06-05 07:11:43] 2025-06-05 05:11:22,717 | INFO     | maximum number of monitored processes: 6
[2025-06-05 07:11:43] 2025-06-05 05:11:24,229 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 07:11:43] 2025-06-05 05:11:24,229 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667924004/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:11:43] 2025-06-05 05:11:24,229 | INFO     | extracted standard info from prmon json
[2025-06-05 07:11:43] 2025-06-05 05:11:24,229 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:11:43] 2025-06-05 05:11:24,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:11:43] 2025-06-05 05:11:24,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:11:43] 2025-06-05 05:11:24,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | sum of square deviations: 164765880.0
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | sum of deviations: -11754420132.0
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | mean x: 1749097658.0
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | mean y: 2480539.3086419753
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | -- intersect: 124783343689.06544
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | intersect: 124783343689.06544
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | chi2: 0.11237072581224972
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | -- intersect: 124783343689.06544
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | current memory leak: -71.34 B/s (using 81 data points, chi2=0.11)
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | ..............................
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | . Timing measurements:
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | . get job = 0 s
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | . initial setup = 1 s
[2025-06-05 07:11:43] 2025-06-05 05:11:24,231 | INFO     | . payload setup = 4 s
[2025-06-05 07:11:43] 2025-06-05 05:11:24,232 | INFO     | . stage-in = 0 s
[2025-06-05 07:11:43] 2025-06-05 05:11:24,232 | INFO     | . payload execution = 5365 s
[2025-06-05 07:11:43] 2025-06-05 05:11:24,232 | INFO     | . stage-out = 0 s
[2025-06-05 07:11:43] 2025-06-05 05:11:24,232 | INFO     | . log creation = 0 s
[2025-06-05 07:11:43] 2025-06-05 05:11:24,232 | INFO     | ..............................
[2025-06-05 07:11:43] 2025-06-05 05:11:24,640 | INFO     | 
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | job summary report
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | --------------------------------------------------
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | PanDA job id: 6667924004
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | task id: 44871837
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | errors: (none)
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | pilot state: finished 
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | transexitcode: 0
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | exeerrorcode: 0
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | exeerrordiag: 
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | exitcode: 0
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | exitmsg: OK
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | cpuconsumptiontime: 20483 s
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | nevents: 400
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | neventsw: 0
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | pid: 3858627
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | pgrp: 3858627
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | corecount: 4
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | event service: False
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | sizes: {0: 2397395, 4: 2397601, 11: 2397629, 5373: 2424181, 5374: 2433184, 5380: 2433298}
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | --------------------------------------------------
[2025-06-05 07:11:43] 2025-06-05 05:11:24,641 | INFO     | 
[2025-06-05 07:11:43] 2025-06-05 05:11:24,642 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | job 6667924004 has completed (purged errors)
[2025-06-05 07:11:43] 2025-06-05 05:11:24,664 | INFO     | overall cleanup function is called
[2025-06-05 07:11:43] 2025-06-05 05:11:25,671 | INFO     | --- collectZombieJob: --- 10, [3858627]
[2025-06-05 07:11:43] 2025-06-05 05:11:25,671 | INFO     | zombie collector waiting for pid 3858627
[2025-06-05 07:11:43] 2025-06-05 05:11:25,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:11:43] 2025-06-05 05:11:25,671 | INFO     | collected zombie processes
[2025-06-05 07:11:43] 2025-06-05 05:11:25,671 | INFO     | will attempt to kill all subprocesses of pid=3858627
[2025-06-05 07:11:43] 2025-06-05 05:11:25,722 | INFO     | process IDs to be killed: [3858627] (in reverse order)
[2025-06-05 07:11:43] 2025-06-05 05:11:25,756 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:11:43] 2025-06-05 05:11:25,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:11:43] 2025-06-05 05:11:25,758 | INFO     | did not find any defunct processes belonging to 3858627
[2025-06-05 07:11:43] 2025-06-05 05:11:25,759 | INFO     | did not find any defunct processes belonging to 3858627
[2025-06-05 07:11:43] 2025-06-05 05:11:25,760 | INFO     | ready for new job
[2025-06-05 07:11:43] 2025-06-05 05:11:25,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:11:43] 2025-06-05 05:11:25,760 | INFO     | **************************************
[2025-06-05 07:11:43] 2025-06-05 05:11:25,760 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:11:43] 2025-06-05 05:11:25,760 | INFO     | **************************************
[2025-06-05 07:11:43] 2025-06-05 05:11:25,760 | INFO     | 
[2025-06-05 07:11:43] 2025-06-05 05:11:25,761 | INFO     | architecture information:
[2025-06-05 07:11:43] 2025-06-05 05:11:25,761 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:11:43] 2025-06-05 05:11:25,774 | INFO     | cat /etc/os-release:
[2025-06-05 07:11:43] NAME="CentOS Linux"
[2025-06-05 07:11:43] VERSION="7 (Core)"
[2025-06-05 07:11:43] ID="centos"
[2025-06-05 07:11:43] ID_LIKE="rhel fedora"
[2025-06-05 07:11:43] VERSION_ID="7"
[2025-06-05 07:11:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:11:43] ANSI_COLOR="0;31"
[2025-06-05 07:11:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:11:43] HOME_URL="https://www.centos.org/"
[2025-06-05 07:11:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:11:43] 
[2025-06-05 07:11:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:11:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:11:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:11:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:11:43] 
[2025-06-05 07:11:43] 2025-06-05 05:11:25,774 | INFO     | **************************************
[2025-06-05 07:11:43] 2025-06-05 05:11:26,278 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 07:11:43] 2025-06-05 05:11:26,294 | INFO     | sufficient remaining disk space (223969542144 B)
[2025-06-05 07:11:43] 2025-06-05 05:11:26,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:11:43] 2025-06-05 05:11:26,295 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:11:43] 2025-06-05 05:11:26,295 | INFO     | update_server=False
[2025-06-05 07:11:43] 2025-06-05 05:11:26,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:11:43] 2025-06-05 05:11:26,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:11:43] 2025-06-05 05:11:26,295 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 07:11:43] 2025-06-05 05:11:26,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:11:43] 2025-06-05 05:11:26,296 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:11:43] 2025-06-05 05:11:26,296 | INFO     | aborting loop
[2025-06-05 07:11:43] 2025-06-05 05:11:26,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:11:43] 2025-06-05 05:11:26,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:11:43] 2025-06-05 05:11:26,736 | INFO     | all data control threads have been joined
[2025-06-05 07:11:43] 2025-06-05 05:11:27,074 | INFO     | all payload control threads have been joined
[2025-06-05 07:11:43] 2025-06-05 05:11:27,301 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:27,301 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:27,385 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:27,400 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:27,472 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:27,680 | INFO     | all job control threads have been joined
[2025-06-05 07:11:43] 2025-06-05 05:11:27,741 | INFO     | [data] control thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:27,862 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:28,037 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:28,080 | INFO     | [payload] control thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:28,301 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:28,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:11:43] 2025-06-05 05:11:28,496 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:28,508 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-06-05 07:11:43] 2025-06-05 05:11:28,686 | INFO     | [job] control thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:28,769 | INFO     | [job] validate thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:29,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:11:43] 2025-06-05 05:11:30,290 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:32,362 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:36,494 | INFO     | job.realtimelogging is not enabled
[2025-06-05 07:11:43] 2025-06-05 05:11:37,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:11:43] 2025-06-05 05:11:38,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199955711808)>', '<ExcThread(monitor, started 140199325587200)>']
[2025-06-05 07:11:43] 2025-06-05 05:11:39,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:11:43] 2025-06-05 05:11:39,366 | INFO     | [monitor] control thread has ended
[2025-06-05 07:11:43] 2025-06-05 05:11:43,780 | INFO     | all workflow threads have been joined
[2025-06-05 07:11:43] 2025-06-05 05:11:43,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:11:43] 2025-06-05 05:11:43,780 | INFO     | traces error code: 0
[2025-06-05 07:11:43] 2025-06-05 05:11:43,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:11:43] 2025-06-05 05:11:43,850 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:11:43] 2025-06-05 05:11:43,854 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:11:43] 2025-06-05 05:11:43,858 [wrapper] pilotpid: 3851993
[2025-06-05 07:11:43] 2025-06-05 05:11:43,862 [wrapper] Pilot exit status: 0
[2025-06-05 07:11:43] 2025-06-05 05:11:43,873 [wrapper] pandaids: 6667924004
[2025-06-05 07:11:43] 2025-06-05 05:11:43,896 [wrapper] cleanup supervisor_pilot 3873768 3851994
[2025-06-05 07:11:43] 2025-06-05 05:11:43,899 [wrapper] Test setup, not cleaning
[2025-06-05 07:11:43] 2025-06-05 05:11:43,903 [wrapper] apfmon messages muted
[2025-06-05 07:11:43] 2025-06-05 05:11:43,907 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:11:43] 2025-06-05 05:11:43,910 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:11:43]  *** Error codes and diagnostics ***
[2025-06-05 07:11:43]     "exeErrorCode": 0,
[2025-06-05 07:11:43]     "exeErrorDiag": "",
[2025-06-05 07:11:43]     "pilotErrorCode": 0,
[2025-06-05 07:11:43]     "pilotErrorDiag": "",
[2025-06-05 07:11:43]  *** Listing of results directory ***
[2025-06-05 07:11:43] total 417768
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc    495897 May 28 05:41 pilot3.tar.gz
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc      5111 May 28 05:50 queuedata.json
[2025-06-05 07:11:43] -rwx------ 1 boinc boinc     37140 May 28 05:51 runpilot2-wrapper.sh
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc       100 Jun  5 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:11:43] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 05:41 run_atlas
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc       105 Jun  5 05:41 job.xml
[2025-06-05 07:11:43] -rw-r--r-- 2 boinc boinc 223410783 Jun  5 05:41 EVNT.44871834._003056.pool.root.1
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc      6854 Jun  5 05:41 init_data.xml
[2025-06-05 07:11:43] drwxrwx--x 2 boinc boinc      4096 Jun  5 05:41 shared
[2025-06-05 07:11:43] -rw-r--r-- 2 boinc boinc    508876 Jun  5 05:41 input.tar.gz
[2025-06-05 07:11:43] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:41 start_atlas.sh
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc         0 Jun  5 05:41 boinc_lockfile
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc      2559 Jun  5 05:41 pandaJob.out
[2025-06-05 07:11:43] -rw------- 1 boinc boinc    987109 Jun  5 05:41 agis_schedconf.cvmfs.json
[2025-06-05 07:11:43] -rw------- 1 boinc boinc   1598969 Jun  5 05:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:11:43] drwx------ 4 boinc boinc      4096 Jun  5 05:41 pilot3
[2025-06-05 07:11:43] -rw------- 1 boinc boinc 198988598 Jun  5 07:10 HITS.44871837._078190.pool.root.1
[2025-06-05 07:11:43] -rw------- 1 boinc boinc        95 Jun  5 07:10 pilot_heartbeat.json
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc       529 Jun  5 07:11 boinc_task_state.xml
[2025-06-05 07:11:43] -rw------- 1 boinc boinc      1019 Jun  5 07:11 memory_monitor_summary.json
[2025-06-05 07:11:43] -rw------- 1 boinc boinc    265770 Jun  5 07:11 log.44871837._078190.job.log.tgz.1
[2025-06-05 07:11:43] -rw------- 1 boinc boinc      7664 Jun  5 07:11 heartbeat.json
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc      8192 Jun  5 07:11 boinc_mmap_file
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc        27 Jun  5 07:11 wrapper_checkpoint.txt
[2025-06-05 07:11:43] -rw------- 1 boinc boinc      4552 Jun  5 07:11 pilotlog.txt
[2025-06-05 07:11:43] -rw------- 1 boinc boinc    517980 Jun  5 07:11 log.44871837._078190.job.log.1
[2025-06-05 07:11:43] -rw------- 1 boinc boinc       357 Jun  5 07:11 output.list
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc       620 Jun  5 07:11 runtime_log
[2025-06-05 07:11:43] -rw------- 1 boinc boinc    798720 Jun  5 07:11 result.tar.gz
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc      8738 Jun  5 07:11 runtime_log.err
[2025-06-05 07:11:43] -rw------- 1 boinc boinc       659 Jun  5 07:11 gEiLDmR0Me7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjAbKDmqOjhkn.diag
[2025-06-05 07:11:43] -rw-r--r-- 1 boinc boinc     21249 Jun  5 07:11 stderr.txt
[2025-06-05 07:11:43] HITS file was successfully produced:
[2025-06-05 07:11:43] -rw------- 1 boinc boinc 198988598 Jun  5 07:10 shared/HITS.pool.root.1
[2025-06-05 07:11:43]  *** Contents of shared directory: ***
[2025-06-05 07:11:43] total 413808
[2025-06-05 07:11:43] -rw-r--r-- 2 boinc boinc 223410783 Jun  5 05:41 ATLAS.root_0
[2025-06-05 07:11:43] -rw-r--r-- 2 boinc boinc    508876 Jun  5 05:41 input.tar.gz
[2025-06-05 07:11:43] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:41 start_atlas.sh
[2025-06-05 07:11:43] -rw------- 1 boinc boinc 198988598 Jun  5 07:10 HITS.pool.root.1
[2025-06-05 07:11:43] -rw------- 1 boinc boinc    798720 Jun  5 07:11 result.tar.gz
07:11:45 (3848295): run_atlas exited; CPU time 20505.085011
07:11:45 (3848295): called boinc_finish(0)

</stderr_txt>
]]>

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