Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:47:50 (32741): wrapper (7.7.26015): starting
21:47:50 (32741): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:47:50] Arguments: --nthreads 8
[2025-06-04 21:47:50] Threads: 8
[2025-06-04 21:47:50] Checking for CVMFS
[2025-06-04 21:47:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:47:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:47:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:47:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:47:51] 2.11.2.0 5091 19413 341860 146800 0 288 11024793 18432001 13366 130560 0 69672924 99.627 51725504 27152 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 21:47:51] CVMFS is ok
[2025-06-04 21:47:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:47:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:47:51] Further information can be found at the LHC@home message board.
[2025-06-04 21:47:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:47:51] Checking for apptainer binary...
[2025-06-04 21:47:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:47:51] Running /usr/bin/apptainer --version
[2025-06-04 21:47:51] apptainer version 1.3.2-1.el7
[2025-06-04 21:47:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:47:59] c-210-41.aglt2.org
[2025-06-04 21:47:59] apptainer works
[2025-06-04 21:47:59] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:47:59] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:47:59] Starting ATLAS job with PandaID=6668730892
[2025-06-04 21:47:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:22:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:22:50] 2025-06-05 05:22:33,199 | INFO     | mean x: 1749094774.565
[2025-06-05 01:22:50] 2025-06-05 05:22:33,199 | INFO     | mean y: 2480164.905
[2025-06-05 01:22:50] 2025-06-05 05:22:33,199 | INFO     | -- intersect: -15055609267.913225
[2025-06-05 01:22:50] 2025-06-05 05:22:33,199 | INFO     | intersect: -15055609267.913225
[2025-06-05 01:22:50] 2025-06-05 05:22:33,199 | INFO     | chi2: 0.1461229699937676
[2025-06-05 01:22:50] 2025-06-05 05:22:33,200 | INFO     | current chi2=0.1461229699937676 (change=94.95684231552326 %)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,200 | INFO     | sum of square deviations: 2299159676.1333256
[2025-06-05 01:22:50] 2025-06-05 05:22:33,201 | INFO     | sum of deviations: 9682042142.866669
[2025-06-05 01:22:50] 2025-06-05 05:22:33,201 | INFO     | mean x: 1749094927.0666666
[2025-06-05 01:22:50] 2025-06-05 05:22:33,201 | INFO     | mean y: 2489927.01025641
[2025-06-05 01:22:50] 2025-06-05 05:22:33,201 | INFO     | -- intersect: -7363162390.019916
[2025-06-05 01:22:50] 2025-06-05 05:22:33,201 | INFO     | intersect: -7363162390.019916
[2025-06-05 01:22:50] 2025-06-05 05:22:33,201 | INFO     | chi2: 0.02581058725674888
[2025-06-05 01:22:50] 2025-06-05 05:22:33,201 | INFO     | current chi2=0.02581058725674888 (change=82.33639293134422 %)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,202 | INFO     | sum of square deviations: 2126789688.6105206
[2025-06-05 01:22:50] 2025-06-05 05:22:33,202 | INFO     | sum of deviations: 6086120714.126316
[2025-06-05 01:22:50] 2025-06-05 05:22:33,203 | INFO     | mean x: 1749095079.5684211
[2025-06-05 01:22:50] 2025-06-05 05:22:33,203 | INFO     | mean y: 2493066.7210526317
[2025-06-05 01:22:50] 2025-06-05 05:22:33,203 | INFO     | -- intersect: -5002799112.259059
[2025-06-05 01:22:50] 2025-06-05 05:22:33,203 | INFO     | intersect: -5002799112.259059
[2025-06-05 01:22:50] 2025-06-05 05:22:33,203 | INFO     | chi2: 0.004640034721498834
[2025-06-05 01:22:50] 2025-06-05 05:22:33,203 | INFO     | current chi2=0.004640034721498834 (change=82.02274642051947 %)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,203 | INFO     | sum of square deviations: 1963268543.221622
[2025-06-05 01:22:50] 2025-06-05 05:22:33,204 | INFO     | sum of deviations: 4767353522.978378
[2025-06-05 01:22:50] 2025-06-05 05:22:33,204 | INFO     | mean x: 1749095232.0648649
[2025-06-05 01:22:50] 2025-06-05 05:22:33,204 | INFO     | mean y: 2494307.3351351353
[2025-06-05 01:22:50] 2025-06-05 05:22:33,204 | INFO     | -- intersect: -4244787780.1810136
[2025-06-05 01:22:50] 2025-06-05 05:22:33,205 | INFO     | intersect: -4244787780.1810136
[2025-06-05 01:22:50] 2025-06-05 05:22:33,205 | INFO     | chi2: 0.001762396173090346
[2025-06-05 01:22:50] 2025-06-05 05:22:33,205 | INFO     | current chi2=0.001762396173090346 (change=62.01760808115132 %)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,205 | INFO     | sum of square deviations: 1808341048.200002
[2025-06-05 01:22:50] 2025-06-05 05:22:33,206 | INFO     | sum of deviations: 3627915879.300001
[2025-06-05 01:22:50] 2025-06-05 05:22:33,206 | INFO     | mean x: 1749095384.5666666
[2025-06-05 01:22:50] 2025-06-05 05:22:33,206 | INFO     | mean y: 2495426.35
[2025-06-05 01:22:50] 2025-06-05 05:22:33,206 | INFO     | -- intersect: -3506561079.554153
[2025-06-05 01:22:50] 2025-06-05 05:22:33,206 | INFO     | intersect: -3506561079.554153
[2025-06-05 01:22:50] 2025-06-05 05:22:33,207 | INFO     | chi2: 0.00106318448071713
[2025-06-05 01:22:50] 2025-06-05 05:22:33,207 | INFO     | current chi2=0.00106318448071713 (change=39.673922529413716 %)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,207 | INFO     | sum of square deviations: 1661785803.177138
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | sum of deviations: 2878592563.6914287
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | mean x: 1749095537.0685713
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | mean y: 2496205.5257142857
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | -- intersect: -3027336758.8462625
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | intersect: -3027336758.8462625
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | chi2: 0.0008117647102986678
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | current chi2=0.0008117647102986678 (change=23.647802895775587 %)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | left removable region: 60
[2025-06-05 01:22:50] 2025-06-05 05:22:33,208 | INFO     | sum of square deviations: 832702104.4172677
[2025-06-05 01:22:50] 2025-06-05 05:22:33,209 | INFO     | sum of deviations: 657951644.5395683
[2025-06-05 01:22:50] 2025-06-05 05:22:33,209 | INFO     | mean x: 1749096269.0647483
[2025-06-05 01:22:50] 2025-06-05 05:22:33,209 | INFO     | mean y: 2498908.273381295
[2025-06-05 01:22:50] 2025-06-05 05:22:33,209 | INFO     | -- intersect: -1379532865.8561306
[2025-06-05 01:22:50] 2025-06-05 05:22:33,209 | INFO     | intersect: -1379532865.8561306
[2025-06-05 01:22:50] 2025-06-05 05:22:33,209 | INFO     | chi2: 5.656198907431637e-05
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | -- intersect: -1379532865.8561306
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | current memory leak: 0.79 B/s (using 139 data points, chi2=0.00)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | ..............................
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | . Timing measurements:
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | . get job = 0 s
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | . initial setup = 11 s
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | . payload setup = 65 s
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | . stage-in = 0 s
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | . payload execution = 12583 s
[2025-06-05 01:22:50] 2025-06-05 05:22:33,210 | INFO     | . stage-out = 2 s
[2025-06-05 01:22:50] 2025-06-05 05:22:33,211 | INFO     | . log creation = 0 s
[2025-06-05 01:22:50] 2025-06-05 05:22:33,211 | INFO     | ..............................
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | 
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | job summary report
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | --------------------------------------------------
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | PanDA job id: 6668730892
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | task id: 44871837
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | errors: (none)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | pilot state: finished 
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | transexitcode: 0
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | exeerrorcode: 0
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | exeerrordiag: 
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | exitcode: 0
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | exitmsg: OK
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | cpuconsumptiontime: 44453 s
[2025-06-05 01:22:50] 2025-06-05 05:22:33,272 | INFO     | nevents: 400
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | neventsw: 0
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | pid: 58610
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | pgrp: 58610
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | corecount: 8
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | event service: False
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | sizes: {0: 2397390, 1: 2397418, 12: 2397418, 23: 2397446, 34: 2397474, 45: 2397502, 46: 2397864, 56: 2397892, 12652: 2427643, 12655: 2436668, 12697: 2436782}
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | --------------------------------------------------
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | 
[2025-06-05 01:22:50] 2025-06-05 05:22:33,273 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 01:22:50] 2025-06-05 05:22:33,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | job 6668730892 has completed (purged errors)
[2025-06-05 01:22:50] 2025-06-05 05:22:33,305 | INFO     | overall cleanup function is called
[2025-06-05 01:22:50] 2025-06-05 05:22:34,312 | INFO     | --- collectZombieJob: --- 10, [58610]
[2025-06-05 01:22:50] 2025-06-05 05:22:34,312 | INFO     | zombie collector waiting for pid 58610
[2025-06-05 01:22:50] 2025-06-05 05:22:34,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:22:50] 2025-06-05 05:22:34,312 | INFO     | collected zombie processes
[2025-06-05 01:22:50] 2025-06-05 05:22:34,312 | INFO     | will attempt to kill all subprocesses of pid=58610
[2025-06-05 01:22:50] 2025-06-05 05:22:34,474 | INFO     | process IDs to be killed: [58610] (in reverse order)
[2025-06-05 01:22:50] 2025-06-05 05:22:34,836 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:22:50] 2025-06-05 05:22:34,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:22:50] 2025-06-05 05:22:34,844 | INFO     | did not find any defunct processes belonging to 58610
[2025-06-05 01:22:50] 2025-06-05 05:22:34,849 | INFO     | did not find any defunct processes belonging to 58610
[2025-06-05 01:22:50] 2025-06-05 05:22:34,850 | INFO     | ready for new job
[2025-06-05 01:22:50] 2025-06-05 05:22:34,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:22:50] 2025-06-05 05:22:34,851 | INFO     | **************************************
[2025-06-05 01:22:50] 2025-06-05 05:22:34,851 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:22:50] 2025-06-05 05:22:34,851 | INFO     | **************************************
[2025-06-05 01:22:50] 2025-06-05 05:22:34,851 | INFO     | 
[2025-06-05 01:22:50] 2025-06-05 05:22:34,854 | INFO     | architecture information:
[2025-06-05 01:22:50] 2025-06-05 05:22:34,855 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:22:50] 2025-06-05 05:22:35,004 | INFO     | cat /etc/os-release:
[2025-06-05 01:22:50] NAME="CentOS Linux"
[2025-06-05 01:22:50] VERSION="7 (Core)"
[2025-06-05 01:22:50] ID="centos"
[2025-06-05 01:22:50] ID_LIKE="rhel fedora"
[2025-06-05 01:22:50] VERSION_ID="7"
[2025-06-05 01:22:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:22:50] ANSI_COLOR="0;31"
[2025-06-05 01:22:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:22:50] HOME_URL="https://www.centos.org/"
[2025-06-05 01:22:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:22:50] 
[2025-06-05 01:22:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:22:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:22:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:22:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:22:50] 
[2025-06-05 01:22:50] 2025-06-05 05:22:35,004 | INFO     | **************************************
[2025-06-05 01:22:50] 2025-06-05 05:22:35,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 01:22:50] 2025-06-05 05:22:35,637 | INFO     | sufficient remaining disk space (76147589120 B)
[2025-06-05 01:22:50] 2025-06-05 05:22:35,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:22:50] 2025-06-05 05:22:35,638 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:22:50] 2025-06-05 05:22:35,638 | INFO     | update_server=False
[2025-06-05 01:22:50] 2025-06-05 05:22:35,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:22:50] 2025-06-05 05:22:36,194 | INFO     | all job control threads have been joined
[2025-06-05 01:22:50] 2025-06-05 05:22:36,297 | INFO     | all data control threads have been joined
[2025-06-05 01:22:50] 2025-06-05 05:22:36,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:22:50] 2025-06-05 05:22:36,461 | INFO     | aborting loop
[2025-06-05 01:22:50] 2025-06-05 05:22:36,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:22:50] 2025-06-05 05:22:36,644 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:36,856 | INFO     | all payload control threads have been joined
[2025-06-05 01:22:50] 2025-06-05 05:22:36,864 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,055 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,200 | INFO     | [job] control thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,231 | INFO     | PID=40449 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 01:22:50] 2025-06-05 05:22:37,243 | INFO     | .. there are 11 such processes running
[2025-06-05 01:22:50] 2025-06-05 05:22:37,243 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:22:50] 2025-06-05 05:22:37,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:22:50] 2025-06-05 05:22:37,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:22:50] 2025-06-05 05:22:37,243 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,304 | INFO     | [data] control thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,468 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,470 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,636 | INFO     | [job] validate thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:22:50] 2025-06-05 05:22:37,796 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:37,862 | INFO     | [payload] control thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:38,150 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:38,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:22:50] 2025-06-05 05:22:38,577 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:39,310 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:41,653 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:22:50] 2025-06-05 05:22:43,346 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120138004288)>', '<ExcThread(monitor, started 140119835121408)>']
[2025-06-05 01:22:50] 2025-06-05 05:22:44,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:22:50] 2025-06-05 05:22:44,286 | INFO     | [monitor] control thread has ended
[2025-06-05 01:22:50] 2025-06-05 05:22:48,372 | INFO     | all workflow threads have been joined
[2025-06-05 01:22:50] 2025-06-05 05:22:48,372 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:22:50] 2025-06-05 05:22:48,373 | INFO     | traces error code: 0
[2025-06-05 01:22:50] 2025-06-05 05:22:48,373 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:22:50] 2025-06-05 05:22:48,907 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:22:50] 2025-06-05 05:22:48,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:22:50] 2025-06-05 05:22:48,986 [wrapper] pilotpid: 40449
[2025-06-05 01:22:50] 2025-06-05 05:22:49,022 [wrapper] Pilot exit status: 0
[2025-06-05 01:22:50] 2025-06-05 05:22:49,046 [wrapper] pandaids: 6668730892
[2025-06-05 01:22:50] 2025-06-05 05:22:49,124 [wrapper] cleanup supervisor_pilot 46185 40450
[2025-06-05 01:22:50] 2025-06-05 05:22:49,170 [wrapper] Test setup, not cleaning
[2025-06-05 01:22:50] 2025-06-05 05:22:49,225 [wrapper] apfmon messages muted
[2025-06-05 01:22:50] 2025-06-05 05:22:49,251 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:22:50] 2025-06-05 05:22:49,274 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:22:50]  *** Error codes and diagnostics ***
[2025-06-05 01:22:50]     "exeErrorCode": 0,
[2025-06-05 01:22:50]     "exeErrorDiag": "",
[2025-06-05 01:22:50]     "pilotErrorCode": 0,
[2025-06-05 01:22:50]     "pilotErrorDiag": "",
[2025-06-05 01:22:50]  *** Listing of results directory ***
[2025-06-05 01:22:50] total 418424
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas    495897 May 28 14:10 pilot3.tar.gz
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas      5111 May 28 14:11 queuedata.json
[2025-06-05 01:22:50] -rwx------ 1 boincer umatlas     37140 May 28 14:12 runpilot2-wrapper.sh
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas       100 Jun  4 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:22:50] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 21:47 run_atlas
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas       105 Jun  4 21:47 job.xml
[2025-06-05 01:22:50] -rw-r--r-- 2 boincer umatlas 223740794 Jun  4 21:47 EVNT.44871834._003442.pool.root.1
[2025-06-05 01:22:50] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 21:47 start_atlas.sh
[2025-06-05 01:22:50] drwxrwx--x 2 boincer umatlas      4096 Jun  4 21:47 shared
[2025-06-05 01:22:50] -rw-r--r-- 2 boincer umatlas    508873 Jun  4 21:47 input.tar.gz
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas         0 Jun  4 21:47 boinc_lockfile
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 21:47 pandaJob.out
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas    987109 Jun  4 21:49 agis_schedconf.cvmfs.json
[2025-06-05 01:22:50] drwx------ 4 boincer umatlas      4096 Jun  4 21:49 pilot3
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas      6253 Jun  5 01:18 init_data.xml
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas 197885357 Jun  5 01:21 HITS.44871837._088397.pool.root.1
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas       531 Jun  5 01:21 boinc_task_state.xml
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas      1072 Jun  5 01:21 memory_monitor_summary.json
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas   1598969 Jun  5 01:21 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas    371363 Jun  5 01:21 log.44871837._088397.job.log.tgz.1
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas        95 Jun  5 01:22 pilot_heartbeat.json
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas      7745 Jun  5 01:22 heartbeat.json
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 01:22 boinc_mmap_file
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas        28 Jun  5 01:22 wrapper_checkpoint.txt
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas      4746 Jun  5 01:22 pilotlog.txt
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas   1130902 Jun  5 01:22 log.44871837._088397.job.log.1
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas       357 Jun  5 01:22 output.list
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas       620 Jun  5 01:22 runtime_log
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas   1525760 Jun  5 01:22 result.tar.gz
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas       663 Jun  5 01:22 TnTLDmCRae7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhmcKDmDVsqtm.diag
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 01:22 runtime_log.err
[2025-06-05 01:22:50] -rw-r--r-- 1 boincer umatlas     20981 Jun  5 01:22 stderr.txt
[2025-06-05 01:22:50] HITS file was successfully produced:
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas 197885357 Jun  5 01:21 shared/HITS.pool.root.1
[2025-06-05 01:22:50]  *** Contents of shared directory: ***
[2025-06-05 01:22:50] total 413760
[2025-06-05 01:22:50] -rw-r--r-- 2 boincer umatlas 223740794 Jun  4 21:47 ATLAS.root_0
[2025-06-05 01:22:50] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 21:47 start_atlas.sh
[2025-06-05 01:22:50] -rw-r--r-- 2 boincer umatlas    508873 Jun  4 21:47 input.tar.gz
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas 197885357 Jun  5 01:21 HITS.pool.root.1
[2025-06-05 01:22:50] -rw------- 1 boincer umatlas   1525760 Jun  5 01:22 result.tar.gz
01:22:51 (32741): run_atlas exited; CPU time 44062.147433
01:22:51 (32741): called boinc_finish(0)

</stderr_txt>
]]>

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