Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:47:22 (978524): wrapper (7.7.26015): starting
21:47:22 (978524): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:47:22] Arguments: --nthreads 8
[2025-06-04 21:47:22] Threads: 8
[2025-06-04 21:47:22] Checking for CVMFS
[2025-06-04 21:47:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:47:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:47:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:47:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:47:22] 2.12.6.0 4995 38111 579200 146800 1 387 25165753 32935936 28683 16776704 1 479927164 99.678 394585253 12758 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 21:47:22] CVMFS is ok
[2025-06-04 21:47:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:47:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:47:22] Further information can be found at the LHC@home message board.
[2025-06-04 21:47:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:47:22] Checking for apptainer binary...
[2025-06-04 21:47:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:47:22] Running /usr/bin/apptainer --version
[2025-06-04 21:47:22] apptainer version 1.4.1-1.el9
[2025-06-04 21:47:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:47:22] c7-6-31.aglt2.org
[2025-06-04 21:47:22] apptainer works
[2025-06-04 21:47:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:47:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:47:22] Starting ATLAS job with PandaID=6668531279
[2025-06-04 21:47:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:53:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:53:12] 2025-06-05 03:52:54,028 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668531279/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:53:12] 2025-06-05 03:52:54,384 | INFO     | number of running child processes to parent process 1013634: 1
[2025-06-04 23:53:12] 2025-06-05 03:52:54,384 | INFO     | maximum number of monitored processes: 6
[2025-06-04 23:53:12] 2025-06-05 03:52:56,025 | INFO     | PID=986361 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 23:53:12] 2025-06-05 03:52:56,025 | INFO     | .. there are 39 such processes running
[2025-06-04 23:53:12] 2025-06-05 03:52:56,887 | INFO     | monitor loop #517: job 0:6668531279 is in state 'finished'
[2025-06-04 23:53:12] 2025-06-05 03:52:56,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,865 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 23:53:12] 2025-06-05 03:52:57,865 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668531279/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,866 | INFO     | extracted standard info from prmon json
[2025-06-04 23:53:12] 2025-06-05 03:52:57,866 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:53:12] 2025-06-05 03:52:57,866 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:53:12] 2025-06-05 03:52:57,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:53:12] 2025-06-05 03:52:57,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:53:12] 2025-06-05 03:52:57,868 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:53:12] 2025-06-05 03:52:57,868 | INFO     | sum of square deviations: 576985702.0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,869 | INFO     | sum of deviations: 8616992553.0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,869 | INFO     | mean x: 1749091806.0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,869 | INFO     | mean y: 2170745.0894308942
[2025-06-04 23:53:12] 2025-06-05 03:52:57,869 | INFO     | -- intersect: -26119639578.063637
[2025-06-04 23:53:12] 2025-06-05 03:52:57,869 | INFO     | intersect: -26119639578.063637
[2025-06-04 23:53:12] 2025-06-05 03:52:57,869 | INFO     | chi2: 1.4796023819642428
[2025-06-04 23:53:12] 2025-06-05 03:52:57,870 | INFO     | sum of square deviations: 509440249.5
[2025-06-04 23:53:12] 2025-06-05 03:52:57,870 | INFO     | sum of deviations: 8439441073.000002
[2025-06-04 23:53:12] 2025-06-05 03:52:57,870 | INFO     | mean x: 1749091653.5
[2025-06-04 23:53:12] 2025-06-05 03:52:57,870 | INFO     | mean y: 2170281.9322033897
[2025-06-04 23:53:12] 2025-06-05 03:52:57,870 | INFO     | -- intersect: -28973467107.294907
[2025-06-04 23:53:12] 2025-06-05 03:52:57,870 | INFO     | intersect: -28973467107.294907
[2025-06-04 23:53:12] 2025-06-05 03:52:57,871 | INFO     | chi2: 1.4761760938901072
[2025-06-04 23:53:12] 2025-06-05 03:52:57,871 | INFO     | current chi2=1.4761760938901072 (change=0.2315681642514677 %)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,871 | INFO     | right removable region: 117
[2025-06-04 23:53:12] 2025-06-05 03:52:57,871 | INFO     | sum of square deviations: 509440249.5
[2025-06-04 23:53:12] 2025-06-05 03:52:57,871 | INFO     | sum of deviations: -6267716755.0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,871 | INFO     | mean x: 1749091958.5
[2025-06-04 23:53:12] 2025-06-05 03:52:57,872 | INFO     | mean y: 2203686.033898305
[2025-06-04 23:53:12] 2025-06-05 03:52:57,872 | INFO     | -- intersect: 21521533941.320713
[2025-06-04 23:53:12] 2025-06-05 03:52:57,872 | INFO     | intersect: 21521533941.320713
[2025-06-04 23:53:12] 2025-06-05 03:52:57,872 | INFO     | chi2: 0.1424245505327408
[2025-06-04 23:53:12] 2025-06-05 03:52:57,872 | INFO     | current chi2=0.1424245505327408 (change=90.37413346525804 %)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,872 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | sum of deviations: -3959082878.000001
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | mean x: 1749092111.0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | mean y: 2198012.0442477874
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | -- intersect: 15480650296.923101
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | intersect: 15480650296.923101
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | chi2: 0.13419275759982538
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | current chi2=0.13419275759982538 (change=5.779757002654601 %)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | left removable region: 20
[2025-06-04 23:53:12] 2025-06-05 03:52:57,873 | INFO     | sum of square deviations: 282974608.0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,874 | INFO     | sum of deviations: 2461295648.9999995
[2025-06-04 23:53:12] 2025-06-05 03:52:57,874 | INFO     | mean x: 1749092233.0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,874 | INFO     | mean y: 2179471.06185567
[2025-06-04 23:53:12] 2025-06-05 03:52:57,874 | INFO     | -- intersect: -15211316655.709326
[2025-06-04 23:53:12] 2025-06-05 03:52:57,874 | INFO     | intersect: -15211316655.709326
[2025-06-04 23:53:12] 2025-06-05 03:52:57,874 | INFO     | chi2: 0.04995476278224067
[2025-06-04 23:53:12] 2025-06-05 03:52:57,874 | INFO     | -- intersect: -15211316655.709326
[2025-06-04 23:53:12] 2025-06-05 03:52:57,874 | INFO     | current memory leak: 8.70 B/s (using 97 data points, chi2=0.05)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | ..............................
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | . Timing measurements:
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | . get job = 0 s
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | . initial setup = 2 s
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | . payload setup = 8 s
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | . stage-in = 0 s
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | . payload execution = 7487 s
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | . stage-out = 0 s
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | . log creation = 0 s
[2025-06-04 23:53:12] 2025-06-05 03:52:57,875 | INFO     | ..............................
[2025-06-04 23:53:12] 2025-06-05 03:52:57,948 | INFO     | 
[2025-06-04 23:53:12] 2025-06-05 03:52:57,948 | INFO     | job summary report
[2025-06-04 23:53:12] 2025-06-05 03:52:57,948 | INFO     | --------------------------------------------------
[2025-06-04 23:53:12] 2025-06-05 03:52:57,948 | INFO     | PanDA job id: 6668531279
[2025-06-04 23:53:12] 2025-06-05 03:52:57,948 | INFO     | task id: 44871837
[2025-06-04 23:53:12] 2025-06-05 03:52:57,948 | INFO     | errors: (none)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,948 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:53:12] 2025-06-05 03:52:57,948 | INFO     | pilot state: finished 
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | transexitcode: 0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | exeerrorcode: 0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | exeerrordiag: 
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | exitcode: 0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | exitmsg: OK
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | cpuconsumptiontime: 39473 s
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | nevents: 400
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | neventsw: 0
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | pid: 1013634
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | pgrp: 1013634
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | corecount: 8
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | event service: False
[2025-06-04 23:53:12] 2025-06-05 03:52:57,949 | INFO     | sizes: {0: 2397392, 6: 2397598, 11: 2397626, 7499: 2425164, 7500: 2434161, 7507: 2434275}
[2025-06-04 23:53:12] 2025-06-05 03:52:57,950 | INFO     | --------------------------------------------------
[2025-06-04 23:53:12] 2025-06-05 03:52:57,950 | INFO     | 
[2025-06-04 23:53:12] 2025-06-05 03:52:57,950 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 23:53:12] 2025-06-05 03:52:57,964 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,965 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,965 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,965 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,965 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,965 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,965 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,966 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:53:12] 2025-06-05 03:52:57,967 | INFO     | job 6668531279 has completed (purged errors)
[2025-06-04 23:53:12] 2025-06-05 03:52:57,967 | INFO     | overall cleanup function is called
[2025-06-04 23:53:12] 2025-06-05 03:52:58,975 | INFO     | --- collectZombieJob: --- 10, [1013634]
[2025-06-04 23:53:12] 2025-06-05 03:52:58,975 | INFO     | zombie collector waiting for pid 1013634
[2025-06-04 23:53:12] 2025-06-05 03:52:58,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:53:12] 2025-06-05 03:52:58,976 | INFO     | collected zombie processes
[2025-06-04 23:53:12] 2025-06-05 03:52:58,976 | INFO     | will attempt to kill all subprocesses of pid=1013634
[2025-06-04 23:53:12] 2025-06-05 03:52:59,336 | INFO     | process IDs to be killed: [1013634] (in reverse order)
[2025-06-04 23:53:12] 2025-06-05 03:52:59,484 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:53:12] 2025-06-05 03:52:59,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:53:12] 2025-06-05 03:52:59,499 | INFO     | did not find any defunct processes belonging to 1013634
[2025-06-04 23:53:12] 2025-06-05 03:52:59,514 | INFO     | did not find any defunct processes belonging to 1013634
[2025-06-04 23:53:12] 2025-06-05 03:52:59,515 | INFO     | ready for new job
[2025-06-04 23:53:12] 2025-06-05 03:52:59,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:53:12] 2025-06-05 03:52:59,516 | INFO     | **************************************
[2025-06-04 23:53:12] 2025-06-05 03:52:59,516 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:53:12] 2025-06-05 03:52:59,516 | INFO     | **************************************
[2025-06-04 23:53:12] 2025-06-05 03:52:59,516 | INFO     | 
[2025-06-04 23:53:12] 2025-06-05 03:52:59,532 | INFO     | architecture information:
[2025-06-04 23:53:12] 2025-06-05 03:52:59,532 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:53:12] 2025-06-05 03:52:59,543 | INFO     | cat /etc/os-release:
[2025-06-04 23:53:12] NAME="CentOS Linux"
[2025-06-04 23:53:12] VERSION="7 (Core)"
[2025-06-04 23:53:12] ID="centos"
[2025-06-04 23:53:12] ID_LIKE="rhel fedora"
[2025-06-04 23:53:12] VERSION_ID="7"
[2025-06-04 23:53:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:53:12] ANSI_COLOR="0;31"
[2025-06-04 23:53:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:53:12] HOME_URL="https://www.centos.org/"
[2025-06-04 23:53:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:53:12] 
[2025-06-04 23:53:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:53:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:53:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:53:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:53:12] 
[2025-06-04 23:53:12] 2025-06-05 03:52:59,543 | INFO     | **************************************
[2025-06-04 23:53:12] 2025-06-05 03:53:00,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 23:53:12] 2025-06-05 03:53:00,062 | INFO     | sufficient remaining disk space (76617351168 B)
[2025-06-04 23:53:12] 2025-06-05 03:53:00,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:53:12] 2025-06-05 03:53:00,063 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:53:12] 2025-06-05 03:53:00,063 | INFO     | update_server=False
[2025-06-04 23:53:12] 2025-06-05 03:53:00,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:53:12] 2025-06-05 03:53:00,063 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:53:12] 2025-06-05 03:53:00,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:53:12] 2025-06-05 03:53:00,064 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:53:12] 2025-06-05 03:53:00,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:53:12] 2025-06-05 03:53:00,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:53:12] 2025-06-05 03:53:00,079 | INFO     | all payload control threads have been joined
[2025-06-04 23:53:12] 2025-06-05 03:53:00,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:53:12] 2025-06-05 03:53:00,401 | INFO     | aborting loop
[2025-06-04 23:53:12] 2025-06-05 03:53:00,682 | INFO     | all data control threads have been joined
[2025-06-04 23:53:12] 2025-06-05 03:53:01,069 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,084 | INFO     | [payload] control thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,103 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,178 | INFO     | all job control threads have been joined
[2025-06-04 23:53:12] 2025-06-05 03:53:01,333 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,405 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,679 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,687 | INFO     | [data] control thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:53:12] 2025-06-05 03:53:01,757 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:01,914 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:02,069 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:02,183 | INFO     | [job] control thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:02,210 | INFO     | [job] validate thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:02,504 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:02,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:53:12] 2025-06-05 03:53:03,963 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:05,735 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:53:12] 2025-06-05 03:53:07,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730731714368)>', '<ExcThread(monitor, started 139730217842432)>']
[2025-06-04 23:53:12] 2025-06-05 03:53:07,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:53:12] 2025-06-05 03:53:07,100 | INFO     | [monitor] control thread has ended
[2025-06-04 23:53:12] 2025-06-05 03:53:12,054 | INFO     | all workflow threads have been joined
[2025-06-04 23:53:12] 2025-06-05 03:53:12,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:53:12] 2025-06-05 03:53:12,055 | INFO     | traces error code: 0
[2025-06-04 23:53:12] 2025-06-05 03:53:12,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:53:12] 2025-06-05 03:53:12,194 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:53:12] 2025-06-05 03:53:12,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:53:12] 2025-06-05 03:53:12,200 [wrapper] pilotpid: 986361
[2025-06-04 23:53:12] 2025-06-05 03:53:12,202 [wrapper] Pilot exit status: 0
[2025-06-04 23:53:12] 2025-06-05 03:53:12,213 [wrapper] pandaids: 6668531279
[2025-06-04 23:53:12] 2025-06-05 03:53:12,292 [wrapper] cleanup supervisor_pilot 2457985 986362
[2025-06-04 23:53:12] 2025-06-05 03:53:12,295 [wrapper] Test setup, not cleaning
[2025-06-04 23:53:12] 2025-06-05 03:53:12,298 [wrapper] apfmon messages muted
[2025-06-04 23:53:12] 2025-06-05 03:53:12,302 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:53:12] 2025-06-05 03:53:12,305 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:53:12]  *** Error codes and diagnostics ***
[2025-06-04 23:53:12]     "exeErrorCode": 0,
[2025-06-04 23:53:12]     "exeErrorDiag": "",
[2025-06-04 23:53:12]     "pilotErrorCode": 0,
[2025-06-04 23:53:12]     "pilotErrorDiag": "",
[2025-06-04 23:53:12]  *** Listing of results directory ***
[2025-06-04 23:53:12] total 410928
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas    495897 May 28 09:15 pilot3.tar.gz
[2025-06-04 23:53:12] -rwx------. 1 boincer umatlas     37140 May 28 09:50 runpilot2-wrapper.sh
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas      5111 May 28 09:50 queuedata.json
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas       100 Jun  4 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:53:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 21:47 run_atlas
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas       105 Jun  4 21:47 job.xml
[2025-06-04 23:53:12] -rw-r--r--. 2 boincer umatlas 225774149 Jun  4 21:47 EVNT.44871834._003318.pool.root.1
[2025-06-04 23:53:12] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 21:47 input.tar.gz
[2025-06-04 23:53:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:47 start_atlas.sh
[2025-06-04 23:53:12] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 21:47 shared
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas         0 Jun  4 21:47 boinc_lockfile
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 21:47 pandaJob.out
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas    987109 Jun  4 21:47 agis_schedconf.cvmfs.json
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas   1598969 Jun  4 21:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:53:12] drwx------. 4 boincer umatlas      4096 Jun  4 21:47 pilot3
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas      6932 Jun  4 23:45 init_data.xml
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas 189110714 Jun  4 23:52 HITS.44871837._085105.pool.root.1
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas       529 Jun  4 23:52 boinc_task_state.xml
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas      1046 Jun  4 23:52 memory_monitor_summary.json
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas        95 Jun  4 23:52 pilot_heartbeat.json
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas    340698 Jun  4 23:52 log.44871837._085105.job.log.tgz.1
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas      7710 Jun  4 23:52 heartbeat.json
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 23:53 boinc_mmap_file
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas        27 Jun  4 23:53 wrapper_checkpoint.txt
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas      4476 Jun  4 23:53 pilotlog.txt
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas    696732 Jun  4 23:53 log.44871837._085105.job.log.1
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas       357 Jun  4 23:53 output.list
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas       620 Jun  4 23:53 runtime_log
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas   1054720 Jun  4 23:53 result.tar.gz
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas       654 Jun  4 23:53 YmENDmmLWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKHcKDmuK9men.diag
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 23:53 runtime_log.err
[2025-06-04 23:53:12] -rw-r--r--. 1 boincer umatlas     21151 Jun  4 23:53 stderr.txt
[2025-06-04 23:53:12] HITS file was successfully produced:
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas 189110714 Jun  4 23:52 shared/HITS.pool.root.1
[2025-06-04 23:53:12]  *** Contents of shared directory: ***
[2025-06-04 23:53:12] total 406716
[2025-06-04 23:53:12] -rw-r--r--. 2 boincer umatlas 225774149 Jun  4 21:47 ATLAS.root_0
[2025-06-04 23:53:12] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 21:47 input.tar.gz
[2025-06-04 23:53:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:47 start_atlas.sh
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas 189110714 Jun  4 23:52 HITS.pool.root.1
[2025-06-04 23:53:12] -rw-------. 1 boincer umatlas   1054720 Jun  4 23:53 result.tar.gz
23:53:34 (978524): run_atlas exited; CPU time 39716.850869
23:53:34 (978524): called boinc_finish(0)

</stderr_txt>
]]>

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