Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:47:01 (13468): wrapper (7.7.26015): starting
21:47:01 (13468): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 21:47:01] Arguments: --nthreads 12
[2025-06-04 21:47:01] Threads: 12
[2025-06-04 21:47:01] Checking for CVMFS
[2025-06-04 21:47:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:47:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:47:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:47:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:47:01] 2.11.2.0 2916 36434 87468 146800 1 1 11532780 20275201 1 130560 0 16716727 99.983 6808852 8093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 21:47:01] CVMFS is ok
[2025-06-04 21:47:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:47:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:47:01] Further information can be found at the LHC@home message board.
[2025-06-04 21:47:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:47:01] Checking for apptainer binary...
[2025-06-04 21:47:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:47:01] Running /usr/bin/apptainer --version
[2025-06-04 21:47:01] apptainer version 1.3.2-1.el7
[2025-06-04 21:47:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:47:03] c-205-23.aglt2.org
[2025-06-04 21:47:03] apptainer works
[2025-06-04 21:47:03] Set ATHENA_PROC_NUMBER=12
[2025-06-04 21:47:03] Set ATHENA_CORE_NUMBER=12
[2025-06-04 21:47:03] Starting ATLAS job with PandaID=6668235251
[2025-06-04 21:47:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:15:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:15:03]  is_altstaged=None
[2025-06-04 23:15:03]  is_tar=False
[2025-06-04 23:15:03]  lfn=log.44871837._081983.job.log.tgz.1
[2025-06-04 23:15:03]  mtime=0
[2025-06-04 23:15:03]  protocol_id=None
[2025-06-04 23:15:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 23:15:03]  replicas=None
[2025-06-04 23:15:03]  scope=mc23_13p6TeV
[2025-06-04 23:15:03]  status=None
[2025-06-04 23:15:03]  status_code=0
[2025-06-04 23:15:03]  storage_token=
[2025-06-04 23:15:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668235251/log.44871837._081983.job.log.tgz.1
[2025-06-04 23:15:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/41/log.44871837._081983.job.log.tgz.1
[2025-06-04 23:15:03]  workdir=None
[2025-06-04 23:15:03] ]
[2025-06-04 23:15:03] 2025-06-05 03:14:35,460 | INFO     | monitor loop #391: job 0:6668235251 is in state 'stageout'
[2025-06-04 23:15:03] 2025-06-05 03:14:35,466 | WARNING  | aborting job monitor tasks since payload process 23544 is not running
[2025-06-04 23:15:03] 2025-06-05 03:14:35,484 | INFO     | transferring file log.44871837._081983.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668235251/log.44871837._081983.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 23:15:03] 2025-06-05 03:14:35,485 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668235251/log.44871837._081983.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._081983.job
[2025-06-04 23:15:03] 2025-06-05 03:14:35,508 | INFO     | adding to output.list: log.44871837._081983.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/41/log.44871837._081983.job.log.tg
[2025-06-04 23:15:03] 2025-06-05 03:14:35,509 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 23:15:03] 2025-06-05 03:14:35,509 | INFO     | summary of transferred files:
[2025-06-04 23:15:03] 2025-06-05 03:14:35,509 | INFO     |  -- lfn=log.44871837._081983.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 23:15:03] 2025-06-05 03:14:35,509 | INFO     | stage-out finished correctly
[2025-06-04 23:15:03] 2025-06-05 03:14:35,595 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 23:15:03] 2025-06-05 03:14:36,077 | INFO     | PID=17132 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 23:15:03] 2025-06-05 03:14:37,782 | INFO     | job 6668235251 has state=finished
[2025-06-04 23:15:03] 2025-06-05 03:14:37,782 | INFO     | preparing for final server update for job 6668235251 in state='finished'
[2025-06-04 23:15:03] 2025-06-05 03:14:37,783 | INFO     | this job has now completed (state=finished)
[2025-06-04 23:15:03] 2025-06-05 03:14:37,783 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 23:15:03] 2025-06-05 03:14:37,783 | INFO     | log transfer has been attempted: DONE
[2025-06-04 23:15:03] 2025-06-05 03:14:37,783 | INFO     | job 6668235251 has finished - writing final server update
[2025-06-04 23:15:03] 2025-06-05 03:14:37,784 | INFO     | total number of processed events: 400 (read)
[2025-06-04 23:15:03] 2025-06-05 03:14:37,785 | INFO     | executing command: lscpu
[2025-06-04 23:15:03] 2025-06-05 03:14:37,814 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 23:15:03] 2025-06-05 03:14:37,969 | INFO     | monitor loop #392: job 0:6668235251 is in state 'finished'
[2025-06-04 23:15:03] 2025-06-05 03:14:37,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:15:03] 2025-06-05 03:14:40,476 | INFO     | monitor loop #393: job 0:6668235251 is in state 'finished'
[2025-06-04 23:15:03] 2025-06-05 03:14:40,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:15:03] 2025-06-05 03:14:42,451 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 23:15:03] 2025-06-05 03:14:42,451 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668235251/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:15:03] 2025-06-05 03:14:42,452 | INFO     | extracted standard info from prmon json
[2025-06-04 23:15:03] 2025-06-05 03:14:42,452 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:15:03] 2025-06-05 03:14:42,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:15:03] 2025-06-05 03:14:42,453 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:15:03] 2025-06-05 03:14:42,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:15:03] 2025-06-05 03:14:42,456 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:15:03] 2025-06-05 03:14:42,456 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 23:15:03] 2025-06-05 03:14:42,456 | INFO     | sum of deviations: -7006982770.000002
[2025-06-04 23:15:03] 2025-06-05 03:14:42,457 | INFO     | mean x: 1749090752.0
[2025-06-04 23:15:03] 2025-06-05 03:14:42,457 | INFO     | mean y: 2726751.1265822784
[2025-06-04 23:15:03] 2025-06-05 03:14:42,457 | INFO     | -- intersect: 80180370326.42337
[2025-06-04 23:15:03] 2025-06-05 03:14:42,457 | INFO     | intersect: 80180370326.42337
[2025-06-04 23:15:03] 2025-06-05 03:14:42,458 | INFO     | chi2: 0.06925959522157596
[2025-06-04 23:15:03] 2025-06-05 03:14:42,458 | INFO     | -- intersect: 80180370326.42337
[2025-06-04 23:15:03] 2025-06-05 03:14:42,458 | INFO     | current memory leak: -45.84 B/s (using 79 data points, chi2=0.07)
[2025-06-04 23:15:03] 2025-06-05 03:14:42,458 | INFO     | ..............................
[2025-06-04 23:15:03] 2025-06-05 03:14:42,459 | INFO     | . Timing measurements:
[2025-06-04 23:15:03] 2025-06-05 03:14:42,459 | INFO     | . get job = 0 s
[2025-06-04 23:15:03] 2025-06-05 03:14:42,459 | INFO     | . initial setup = 2 s
[2025-06-04 23:15:03] 2025-06-05 03:14:42,459 | INFO     | . payload setup = 9 s
[2025-06-04 23:15:03] 2025-06-05 03:14:42,459 | INFO     | . stage-in = 0 s
[2025-06-04 23:15:03] 2025-06-05 03:14:42,459 | INFO     | . payload execution = 5207 s
[2025-06-04 23:15:03] 2025-06-05 03:14:42,460 | INFO     | . stage-out = 0 s
[2025-06-04 23:15:03] 2025-06-05 03:14:42,460 | INFO     | . log creation = 0 s
[2025-06-04 23:15:03] 2025-06-05 03:14:42,460 | INFO     | ..............................
[2025-06-04 23:15:03] 2025-06-05 03:14:42,951 | INFO     | 
[2025-06-04 23:15:03] 2025-06-05 03:14:42,952 | INFO     | job summary report
[2025-06-04 23:15:03] 2025-06-05 03:14:42,952 | INFO     | --------------------------------------------------
[2025-06-04 23:15:03] 2025-06-05 03:14:42,952 | INFO     | PanDA job id: 6668235251
[2025-06-04 23:15:03] 2025-06-05 03:14:42,952 | INFO     | task id: 44871837
[2025-06-04 23:15:03] 2025-06-05 03:14:42,952 | INFO     | errors: (none)
[2025-06-04 23:15:03] 2025-06-05 03:14:42,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:15:03] 2025-06-05 03:14:42,953 | INFO     | pilot state: finished 
[2025-06-04 23:15:03] 2025-06-05 03:14:42,953 | INFO     | transexitcode: 0
[2025-06-04 23:15:03] 2025-06-05 03:14:42,953 | INFO     | exeerrorcode: 0
[2025-06-04 23:15:03] 2025-06-05 03:14:42,953 | INFO     | exeerrordiag: 
[2025-06-04 23:15:03] 2025-06-05 03:14:42,953 | INFO     | exitcode: 0
[2025-06-04 23:15:03] 2025-06-05 03:14:42,953 | INFO     | exitmsg: OK
[2025-06-04 23:15:03] 2025-06-05 03:14:42,954 | INFO     | cpuconsumptiontime: 57780 s
[2025-06-04 23:15:03] 2025-06-05 03:14:42,954 | INFO     | nevents: 400
[2025-06-04 23:15:03] 2025-06-05 03:14:42,954 | INFO     | neventsw: 0
[2025-06-04 23:15:03] 2025-06-05 03:14:42,954 | INFO     | pid: 23544
[2025-06-04 23:15:03] 2025-06-05 03:14:42,954 | INFO     | pgrp: 23544
[2025-06-04 23:15:03] 2025-06-05 03:14:42,954 | INFO     | corecount: 12
[2025-06-04 23:15:03] 2025-06-05 03:14:42,955 | INFO     | event service: False
[2025-06-04 23:15:03] 2025-06-05 03:14:42,955 | INFO     | sizes: {0: 2397168, 1: 2397367, 6: 2397573, 11: 2397601, 5221: 2423808, 5223: 2432933, 5230: 2433047}
[2025-06-04 23:15:03] 2025-06-05 03:14:42,955 | INFO     | --------------------------------------------------
[2025-06-04 23:15:03] 2025-06-05 03:14:42,955 | INFO     | 
[2025-06-04 23:15:03] 2025-06-05 03:14:42,955 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 23:15:03] 2025-06-05 03:14:42,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,993 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:15:03] 2025-06-05 03:14:42,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,993 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:15:03] 2025-06-05 03:14:42,993 | INFO     | job 6668235251 has completed (purged errors)
[2025-06-04 23:15:03] 2025-06-05 03:14:42,994 | INFO     | overall cleanup function is called
[2025-06-04 23:15:03] 2025-06-05 03:14:44,001 | INFO     | --- collectZombieJob: --- 10, [23544]
[2025-06-04 23:15:03] 2025-06-05 03:14:44,001 | INFO     | zombie collector waiting for pid 23544
[2025-06-04 23:15:03] 2025-06-05 03:14:44,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:15:03] 2025-06-05 03:14:44,002 | INFO     | collected zombie processes
[2025-06-04 23:15:03] 2025-06-05 03:14:44,002 | INFO     | will attempt to kill all subprocesses of pid=23544
[2025-06-04 23:15:03] 2025-06-05 03:14:44,094 | INFO     | process IDs to be killed: [23544] (in reverse order)
[2025-06-04 23:15:03] 2025-06-05 03:14:44,149 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:15:03] 2025-06-05 03:14:44,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:15:03] 2025-06-05 03:14:44,152 | INFO     | did not find any defunct processes belonging to 23544
[2025-06-04 23:15:03] 2025-06-05 03:14:44,154 | INFO     | did not find any defunct processes belonging to 23544
[2025-06-04 23:15:03] 2025-06-05 03:14:44,155 | INFO     | ready for new job
[2025-06-04 23:15:03] 2025-06-05 03:14:44,155 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:15:03] 2025-06-05 03:14:44,156 | INFO     | **************************************
[2025-06-04 23:15:03] 2025-06-05 03:14:44,156 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:15:03] 2025-06-05 03:14:44,156 | INFO     | **************************************
[2025-06-04 23:15:03] 2025-06-05 03:14:44,156 | INFO     | 
[2025-06-04 23:15:03] 2025-06-05 03:14:44,157 | INFO     | architecture information:
[2025-06-04 23:15:03] 2025-06-05 03:14:44,157 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:15:03] 2025-06-05 03:14:44,174 | INFO     | cat /etc/os-release:
[2025-06-04 23:15:03] NAME="CentOS Linux"
[2025-06-04 23:15:03] VERSION="7 (Core)"
[2025-06-04 23:15:03] ID="centos"
[2025-06-04 23:15:03] ID_LIKE="rhel fedora"
[2025-06-04 23:15:03] VERSION_ID="7"
[2025-06-04 23:15:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:15:03] ANSI_COLOR="0;31"
[2025-06-04 23:15:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:15:03] HOME_URL="https://www.centos.org/"
[2025-06-04 23:15:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:15:03] 
[2025-06-04 23:15:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:15:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:15:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:15:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:15:03] 
[2025-06-04 23:15:03] 2025-06-05 03:14:44,174 | INFO     | **************************************
[2025-06-04 23:15:03] 2025-06-05 03:14:44,675 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 23:15:03] 2025-06-05 03:14:44,691 | INFO     | sufficient remaining disk space (29388439552 B)
[2025-06-04 23:15:03] 2025-06-05 03:14:44,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:15:03] 2025-06-05 03:14:44,692 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:15:03] 2025-06-05 03:14:44,692 | INFO     | update_server=False
[2025-06-04 23:15:03] 2025-06-05 03:14:44,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:15:03] 2025-06-05 03:14:44,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:15:03] 2025-06-05 03:14:44,693 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:15:03] 2025-06-05 03:14:44,693 | INFO     | aborting loop
[2025-06-04 23:15:03] 2025-06-05 03:14:44,693 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:15:03] 2025-06-05 03:14:44,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:15:03] 2025-06-05 03:14:44,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:15:03] 2025-06-05 03:14:44,867 | INFO     | all payload control threads have been joined
[2025-06-04 23:15:03] 2025-06-05 03:14:44,879 | INFO     | all data control threads have been joined
[2025-06-04 23:15:03] 2025-06-05 03:14:45,225 | INFO     | all job control threads have been joined
[2025-06-04 23:15:03] 2025-06-05 03:14:45,698 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:45,699 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:45,873 | INFO     | [payload] control thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:45,884 | INFO     | [data] control thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:45,938 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:46,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:15:03] 2025-06-05 03:14:46,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:15:03] 2025-06-05 03:14:46,215 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:46,231 | INFO     | [job] control thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:46,458 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:46,714 | INFO     | [job] validate thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:46,939 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:47,109 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:47,110 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:47,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:15:03] 2025-06-05 03:14:48,115 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:48,560 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:50,194 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:55,069 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:15:03] 2025-06-05 03:14:56,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:15:03] 2025-06-05 03:14:58,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794417026880)>', '<ExcThread(monitor, started 139793845438208)>']
[2025-06-04 23:15:03] 2025-06-05 03:14:58,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:15:03] 2025-06-05 03:14:58,747 | INFO     | [monitor] control thread has ended
[2025-06-04 23:15:03] 2025-06-05 03:15:03,088 | INFO     | all workflow threads have been joined
[2025-06-04 23:15:03] 2025-06-05 03:15:03,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:15:03] 2025-06-05 03:15:03,088 | INFO     | traces error code: 0
[2025-06-04 23:15:03] 2025-06-05 03:15:03,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:15:03] 2025-06-05 03:15:03,171 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:15:03] 2025-06-05 03:15:03,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:15:03] 2025-06-05 03:15:03,178 [wrapper] pilotpid: 17132
[2025-06-04 23:15:03] 2025-06-05 03:15:03,182 [wrapper] Pilot exit status: 0
[2025-06-04 23:15:03] 2025-06-05 03:15:03,198 [wrapper] pandaids: 6668235251
[2025-06-04 23:15:03] 2025-06-05 03:15:03,238 [wrapper] cleanup supervisor_pilot  6645 17133
[2025-06-04 23:15:03] 2025-06-05 03:15:03,243 [wrapper] Test setup, not cleaning
[2025-06-04 23:15:03] 2025-06-05 03:15:03,247 [wrapper] apfmon messages muted
[2025-06-04 23:15:03] 2025-06-05 03:15:03,251 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:15:03] 2025-06-05 03:15:03,255 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:15:03]  *** Error codes and diagnostics ***
[2025-06-04 23:15:03]     "exeErrorCode": 0,
[2025-06-04 23:15:03]     "exeErrorDiag": "",
[2025-06-04 23:15:03]     "pilotErrorCode": 0,
[2025-06-04 23:15:03]     "pilotErrorDiag": "",
[2025-06-04 23:15:03]  *** Listing of results directory ***
[2025-06-04 23:15:03] total 415072
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas    495897 May 28 05:03 pilot3.tar.gz
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas      5111 May 28 05:05 queuedata.json
[2025-06-04 23:15:03] -rwx------ 1 boincer umatlas     37140 May 28 05:06 runpilot2-wrapper.sh
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas       100 Jun  4 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:15:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 21:47 run_atlas
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas       105 Jun  4 21:47 job.xml
[2025-06-04 23:15:03] -rw-r--r-- 2 boincer umatlas 222878675 Jun  4 21:47 EVNT.44871834._003202.pool.root.1
[2025-06-04 23:15:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 21:47 start_atlas.sh
[2025-06-04 23:15:03] drwxrwx--x 2 boincer umatlas      4096 Jun  4 21:47 shared
[2025-06-04 23:15:03] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 21:47 input.tar.gz
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas         0 Jun  4 21:47 boinc_lockfile
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas      2557 Jun  4 21:47 pandaJob.out
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas    987109 Jun  4 21:47 agis_schedconf.cvmfs.json
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas   1598969 Jun  4 21:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:15:03] drwx------ 4 boincer umatlas      4096 Jun  4 21:47 pilot3
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 23:10 init_data.xml
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas 196627901 Jun  4 23:14 HITS.44871837._081983.pool.root.1
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas       529 Jun  4 23:14 boinc_task_state.xml
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas        95 Jun  4 23:14 pilot_heartbeat.json
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas      1046 Jun  4 23:14 memory_monitor_summary.json
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas    358232 Jun  4 23:14 log.44871837._081983.job.log.tgz.1
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas      7750 Jun  4 23:14 heartbeat.json
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas        27 Jun  4 23:14 wrapper_checkpoint.txt
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 23:14 boinc_mmap_file
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas      4548 Jun  4 23:15 pilotlog.txt
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas    492665 Jun  4 23:15 log.44871837._081983.job.log.1
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas       357 Jun  4 23:15 output.list
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas       620 Jun  4 23:15 runtime_log
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas    870400 Jun  4 23:15 result.tar.gz
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 23:15 runtime_log.err
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas       659 Jun  4 23:15 CV8LDmpuRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrlbKDmrH4x1m.diag
[2025-06-04 23:15:03] -rw-r--r-- 1 boincer umatlas     21466 Jun  4 23:15 stderr.txt
[2025-06-04 23:15:03] HITS file was successfully produced:
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas 196627901 Jun  4 23:14 shared/HITS.pool.root.1
[2025-06-04 23:15:03]  *** Contents of shared directory: ***
[2025-06-04 23:15:03] total 411044
[2025-06-04 23:15:03] -rw-r--r-- 2 boincer umatlas 222878675 Jun  4 21:47 ATLAS.root_0
[2025-06-04 23:15:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 21:47 start_atlas.sh
[2025-06-04 23:15:03] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 21:47 input.tar.gz
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas 196627901 Jun  4 23:14 HITS.pool.root.1
[2025-06-04 23:15:03] -rw------- 1 boincer umatlas    870400 Jun  4 23:15 result.tar.gz
23:15:05 (13468): run_atlas exited; CPU time 57746.267730
23:15:05 (13468): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN