Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:39:24 (2603162): wrapper (7.7.26015): starting
21:39:24 (2603162): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:39:24] Arguments: --nthreads 8
[2025-06-04 21:39:24] Threads: 8
[2025-06-04 21:39:24] Checking for CVMFS
[2025-06-04 21:39:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:39:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:39:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:39:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:39:25] 2.12.6.0 5356 614 163708 146800 2 633 24306707 32935936 19029 16776704 0 2779099 99.696 1819237 27495 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 21:39:25] CVMFS is ok
[2025-06-04 21:39:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:39:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:39:25] Further information can be found at the LHC@home message board.
[2025-06-04 21:39:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:39:25] Checking for apptainer binary...
[2025-06-04 21:39:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:39:25] Running /usr/bin/apptainer --version
[2025-06-04 21:39:25] apptainer version 1.4.1-1.el9
[2025-06-04 21:39:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:39:25] c7-16-8.aglt2.org
[2025-06-04 21:39:25] apptainer works
[2025-06-04 21:39:25] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:39:25] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:39:25] Starting ATLAS job with PandaID=6667440135
[2025-06-04 21:39:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:48:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:48:51] 2025-06-05 03:48:29,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:48:51] 2025-06-05 03:48:29,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:48:51] 2025-06-05 03:48:29,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:48:51] 2025-06-05 03:48:29,788 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:48:51] 2025-06-05 03:48:29,794 | INFO     | sum of square deviations: 635128340.9921248
[2025-06-04 23:48:51] 2025-06-05 03:48:29,795 | INFO     | sum of deviations: -19150689369.551186
[2025-06-04 23:48:51] 2025-06-05 03:48:29,795 | INFO     | mean x: 1749091445.007874
[2025-06-04 23:48:51] 2025-06-05 03:48:29,795 | INFO     | mean y: 2289806.551181102
[2025-06-04 23:48:51] 2025-06-05 03:48:29,795 | INFO     | -- intersect: 52741720218.30248
[2025-06-04 23:48:51] 2025-06-05 03:48:29,795 | INFO     | intersect: 52741720218.30248
[2025-06-04 23:48:51] 2025-06-05 03:48:29,795 | INFO     | chi2: 2.1684457287088232
[2025-06-04 23:48:51] 2025-06-05 03:48:29,796 | INFO     | sum of square deviations: 563024968.4918019
[2025-06-04 23:48:51] 2025-06-05 03:48:29,796 | INFO     | sum of deviations: -11106851599.426228
[2025-06-04 23:48:51] 2025-06-05 03:48:29,796 | INFO     | mean x: 1749091292.5081968
[2025-06-04 23:48:51] 2025-06-05 03:48:29,796 | INFO     | mean y: 2306340.426229508
[2025-06-04 23:48:51] 2025-06-05 03:48:29,796 | INFO     | -- intersect: 34506810593.18927
[2025-06-04 23:48:51] 2025-06-05 03:48:29,796 | INFO     | intersect: 34506810593.18927
[2025-06-04 23:48:51] 2025-06-05 03:48:29,797 | INFO     | chi2: 1.513703703881012
[2025-06-04 23:48:51] 2025-06-05 03:48:29,797 | INFO     | current chi2=1.513703703881012 (change=30.19407016553142 %)
[2025-06-04 23:48:51] 2025-06-05 03:48:29,797 | INFO     | sum of square deviations: 496596120.99145323
[2025-06-04 23:48:51] 2025-06-05 03:48:29,797 | INFO     | sum of deviations: -9840047126.880342
[2025-06-04 23:48:51] 2025-06-05 03:48:29,798 | INFO     | mean x: 1749091140.008547
[2025-06-04 23:48:51] 2025-06-05 03:48:29,802 | INFO     | mean y: 2309241.8803418805
[2025-06-04 23:48:51] 2025-06-05 03:48:29,802 | INFO     | -- intersect: 34660532533.13554
[2025-06-04 23:48:51] 2025-06-05 03:48:29,802 | INFO     | intersect: 34660532533.13554
[2025-06-04 23:48:51] 2025-06-05 03:48:29,802 | INFO     | chi2: 1.5130139932580111
[2025-06-04 23:48:51] 2025-06-05 03:48:29,802 | INFO     | current chi2=1.5130139932580111 (change=0.045564440466946486 %)
[2025-06-04 23:48:51] 2025-06-05 03:48:29,802 | INFO     | right removable region: 116
[2025-06-04 23:48:51] 2025-06-05 03:48:29,802 | INFO     | sum of square deviations: 563024358.4918019
[2025-06-04 23:48:51] 2025-06-05 03:48:29,803 | INFO     | sum of deviations: -32416876069.491783
[2025-06-04 23:48:51] 2025-06-05 03:48:29,803 | INFO     | mean x: 1749091597.5081968
[2025-06-04 23:48:51] 2025-06-05 03:48:29,803 | INFO     | mean y: 2317225.4918032787
[2025-06-04 23:48:51] 2025-06-05 03:48:29,803 | INFO     | -- intersect: 100708591644.05806
[2025-06-04 23:48:51] 2025-06-05 03:48:29,803 | INFO     | intersect: 100708591644.05806
[2025-06-04 23:48:51] 2025-06-05 03:48:29,803 | INFO     | chi2: 0.9702290235150355
[2025-06-04 23:48:51] 2025-06-05 03:48:29,803 | INFO     | current chi2=0.9702290235150355 (change=55.2569376918302 %)
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | sum of square deviations: 496594900.99145323
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | sum of deviations: -27529796927.256397
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | mean x: 1749091750.008547
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | mean y: 2305970.2564102565
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | -- intersect: 96966935668.908
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | intersect: 96966935668.908
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | chi2: 0.9625249405300991
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | current chi2=0.9625249405300991 (change=0.7940478792342602 %)
[2025-06-04 23:48:51] 2025-06-05 03:48:29,804 | INFO     | left removable region: 20
[2025-06-04 23:48:51] 2025-06-05 03:48:29,805 | INFO     | sum of square deviations: 274309863.98958343
[2025-06-04 23:48:51] 2025-06-05 03:48:29,805 | INFO     | sum of deviations: -8178728031.500002
[2025-06-04 23:48:51] 2025-06-05 03:48:29,805 | INFO     | mean x: 1749091719.5104167
[2025-06-04 23:48:51] 2025-06-05 03:48:29,805 | INFO     | mean y: 2297452.5
[2025-06-04 23:48:51] 2025-06-05 03:48:29,805 | INFO     | -- intersect: 52152611217.985344
[2025-06-04 23:48:51] 2025-06-05 03:48:29,805 | INFO     | intersect: 52152611217.985344
[2025-06-04 23:48:51] 2025-06-05 03:48:29,805 | INFO     | chi2: 0.20675632065203978
[2025-06-04 23:48:51] 2025-06-05 03:48:29,805 | INFO     | -- intersect: 52152611217.985344
[2025-06-04 23:48:51] 2025-06-05 03:48:29,806 | INFO     | current memory leak: -29.82 B/s (using 96 data points, chi2=0.21)
[2025-06-04 23:48:51] 2025-06-05 03:48:29,810 | INFO     | ..............................
[2025-06-04 23:48:51] 2025-06-05 03:48:29,810 | INFO     | . Timing measurements:
[2025-06-04 23:48:51] 2025-06-05 03:48:29,810 | INFO     | . get job = 0 s
[2025-06-04 23:48:51] 2025-06-05 03:48:29,811 | INFO     | . initial setup = 2 s
[2025-06-04 23:48:51] 2025-06-05 03:48:29,811 | INFO     | . payload setup = 6 s
[2025-06-04 23:48:51] 2025-06-05 03:48:29,811 | INFO     | . stage-in = 0 s
[2025-06-04 23:48:51] 2025-06-05 03:48:29,811 | INFO     | . payload execution = 7702 s
[2025-06-04 23:48:51] 2025-06-05 03:48:29,811 | INFO     | . stage-out = 0 s
[2025-06-04 23:48:51] 2025-06-05 03:48:29,811 | INFO     | . log creation = 0 s
[2025-06-04 23:48:51] 2025-06-05 03:48:29,811 | INFO     | ..............................
[2025-06-04 23:48:51] 2025-06-05 03:48:29,889 | INFO     | 
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | job summary report
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | --------------------------------------------------
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | PanDA job id: 6667440135
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | task id: 44871837
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | errors: (none)
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | pilot state: finished 
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | transexitcode: 0
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | exeerrorcode: 0
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | exeerrordiag: 
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | exitcode: 0
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | exitmsg: OK
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | cpuconsumptiontime: 40447 s
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | nevents: 400
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | neventsw: 0
[2025-06-04 23:48:51] 2025-06-05 03:48:29,891 | INFO     | pid: 2616092
[2025-06-04 23:48:51] 2025-06-05 03:48:29,892 | INFO     | pgrp: 2616092
[2025-06-04 23:48:51] 2025-06-05 03:48:29,892 | INFO     | corecount: 8
[2025-06-04 23:48:51] 2025-06-05 03:48:29,892 | INFO     | event service: False
[2025-06-04 23:48:51] 2025-06-05 03:48:29,892 | INFO     | sizes: {0: 2397392, 5: 2397598, 11: 2397654, 7712: 2425201, 7713: 2425200, 7714: 2434381, 7719: 2434495}
[2025-06-04 23:48:51] 2025-06-05 03:48:29,892 | INFO     | --------------------------------------------------
[2025-06-04 23:48:51] 2025-06-05 03:48:29,892 | INFO     | 
[2025-06-04 23:48:51] 2025-06-05 03:48:29,892 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 23:48:51] 2025-06-05 03:48:29,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:48:51] 2025-06-05 03:48:29,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,915 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:48:51] 2025-06-05 03:48:29,915 | INFO     | job 6667440135 has completed (purged errors)
[2025-06-04 23:48:51] 2025-06-05 03:48:29,915 | INFO     | overall cleanup function is called
[2025-06-04 23:48:51] 2025-06-05 03:48:30,923 | INFO     | --- collectZombieJob: --- 10, [2616092]
[2025-06-04 23:48:51] 2025-06-05 03:48:30,923 | INFO     | zombie collector waiting for pid 2616092
[2025-06-04 23:48:51] 2025-06-05 03:48:30,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:48:51] 2025-06-05 03:48:30,923 | INFO     | collected zombie processes
[2025-06-04 23:48:51] 2025-06-05 03:48:30,923 | INFO     | will attempt to kill all subprocesses of pid=2616092
[2025-06-04 23:48:51] 2025-06-05 03:48:31,698 | INFO     | process IDs to be killed: [2616092] (in reverse order)
[2025-06-04 23:48:51] 2025-06-05 03:48:31,824 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:48:51] 2025-06-05 03:48:31,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:48:51] 2025-06-05 03:48:31,872 | INFO     | did not find any defunct processes belonging to 2616092
[2025-06-04 23:48:51] 2025-06-05 03:48:31,918 | INFO     | did not find any defunct processes belonging to 2616092
[2025-06-04 23:48:51] 2025-06-05 03:48:31,919 | INFO     | ready for new job
[2025-06-04 23:48:51] 2025-06-05 03:48:31,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:48:51] 2025-06-05 03:48:31,921 | INFO     | **************************************
[2025-06-04 23:48:51] 2025-06-05 03:48:31,922 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:48:51] 2025-06-05 03:48:31,922 | INFO     | **************************************
[2025-06-04 23:48:51] 2025-06-05 03:48:31,922 | INFO     | 
[2025-06-04 23:48:51] 2025-06-05 03:48:31,947 | INFO     | PID=2606876 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 23:48:51] 2025-06-05 03:48:31,947 | INFO     | .. there are 19 such processes running
[2025-06-04 23:48:51] 2025-06-05 03:48:31,950 | INFO     | architecture information:
[2025-06-04 23:48:51] 2025-06-05 03:48:31,951 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:48:51] 2025-06-05 03:48:31,965 | INFO     | cat /etc/os-release:
[2025-06-04 23:48:51] NAME="CentOS Linux"
[2025-06-04 23:48:51] VERSION="7 (Core)"
[2025-06-04 23:48:51] ID="centos"
[2025-06-04 23:48:51] ID_LIKE="rhel fedora"
[2025-06-04 23:48:51] VERSION_ID="7"
[2025-06-04 23:48:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:48:51] ANSI_COLOR="0;31"
[2025-06-04 23:48:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:48:51] HOME_URL="https://www.centos.org/"
[2025-06-04 23:48:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:48:51] 
[2025-06-04 23:48:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:48:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:48:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:48:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:48:51] 
[2025-06-04 23:48:51] 2025-06-05 03:48:31,965 | INFO     | **************************************
[2025-06-04 23:48:51] 2025-06-05 03:48:32,470 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 23:48:51] 2025-06-05 03:48:32,488 | INFO     | sufficient remaining disk space (76616302592 B)
[2025-06-04 23:48:51] 2025-06-05 03:48:32,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:48:51] 2025-06-05 03:48:32,489 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:48:51] 2025-06-05 03:48:32,489 | INFO     | update_server=False
[2025-06-04 23:48:51] 2025-06-05 03:48:32,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:48:51] 2025-06-05 03:48:32,489 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:48:51] 2025-06-05 03:48:32,490 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:48:51] 2025-06-05 03:48:32,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:48:51] 2025-06-05 03:48:32,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:48:51] 2025-06-05 03:48:32,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:48:51] 2025-06-05 03:48:32,491 | INFO     | aborting loop
[2025-06-04 23:48:51] 2025-06-05 03:48:32,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:48:51] 2025-06-05 03:48:33,048 | INFO     | all data control threads have been joined
[2025-06-04 23:48:51] 2025-06-05 03:48:33,376 | INFO     | all payload control threads have been joined
[2025-06-04 23:48:51] 2025-06-05 03:48:33,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:48:51] 2025-06-05 03:48:33,495 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:33,496 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:33,551 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:33,731 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:33,918 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:34,053 | INFO     | [data] control thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:34,080 | INFO     | all job control threads have been joined
[2025-06-04 23:48:51] 2025-06-05 03:48:34,243 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:34,381 | INFO     | [payload] control thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:34,732 | INFO     | [job] validate thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:34,908 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:34,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:48:51] 2025-06-05 03:48:34,967 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:35,080 | INFO     | [job] control thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:35,464 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:35,916 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:36,497 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:43,353 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:48:51] 2025-06-05 03:48:44,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:48:51] 2025-06-05 03:48:45,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568773134144)>', '<ExcThread(monitor, started 140568264943360)>']
[2025-06-04 23:48:51] 2025-06-05 03:48:46,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:48:51] 2025-06-05 03:48:46,567 | INFO     | [monitor] control thread has ended
[2025-06-04 23:48:51] 2025-06-05 03:48:50,679 | INFO     | all workflow threads have been joined
[2025-06-04 23:48:51] 2025-06-05 03:48:50,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:48:51] 2025-06-05 03:48:50,680 | INFO     | traces error code: 0
[2025-06-04 23:48:51] 2025-06-05 03:48:50,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:48:51] 2025-06-05 03:48:50,832 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:48:51] 2025-06-05 03:48:50,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:48:51] 2025-06-05 03:48:50,837 [wrapper] pilotpid: 2606876
[2025-06-04 23:48:51] 2025-06-05 03:48:50,840 [wrapper] Pilot exit status: 0
[2025-06-04 23:48:51] 2025-06-05 03:48:50,852 [wrapper] pandaids: 6667440135
[2025-06-04 23:48:51] 2025-06-05 03:48:50,940 [wrapper] cleanup supervisor_pilot 3060969 2606877
[2025-06-04 23:48:51] 2025-06-05 03:48:50,942 [wrapper] Test setup, not cleaning
[2025-06-04 23:48:51] 2025-06-05 03:48:50,945 [wrapper] apfmon messages muted
[2025-06-04 23:48:51] 2025-06-05 03:48:50,948 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:48:51] 2025-06-05 03:48:50,950 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:48:51]  *** Error codes and diagnostics ***
[2025-06-04 23:48:51]     "exeErrorCode": 0,
[2025-06-04 23:48:51]     "exeErrorDiag": "",
[2025-06-04 23:48:51]     "pilotErrorCode": 0,
[2025-06-04 23:48:51]     "pilotErrorDiag": "",
[2025-06-04 23:48:51]  *** Listing of results directory ***
[2025-06-04 23:48:51] total 417500
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas    495897 May 27 15:34 pilot3.tar.gz
[2025-06-04 23:48:51] -rwx------. 1 boincer umatlas     37140 May 27 16:00 runpilot2-wrapper.sh
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas      5111 May 27 16:00 queuedata.json
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas       100 Jun  4 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:48:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 21:39 run_atlas
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas       105 Jun  4 21:39 job.xml
[2025-06-04 23:48:51] -rw-r--r--. 2 boincer umatlas 223942780 Jun  4 21:39 EVNT.44871834._002854.pool.root.1
[2025-06-04 23:48:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:39 start_atlas.sh
[2025-06-04 23:48:51] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 21:39 shared
[2025-06-04 23:48:51] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 21:39 input.tar.gz
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas         0 Jun  4 21:39 boinc_lockfile
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 21:39 pandaJob.out
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas    987109 Jun  4 21:39 agis_schedconf.cvmfs.json
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas   1598969 Jun  4 21:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:48:51] drwx------. 4 boincer umatlas      4096 Jun  4 21:39 pilot3
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas 197676530 Jun  4 23:47 HITS.44871837._072691.pool.root.1
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas        95 Jun  4 23:47 pilot_heartbeat.json
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas       529 Jun  4 23:48 boinc_task_state.xml
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas      1029 Jun  4 23:48 memory_monitor_summary.json
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas    327830 Jun  4 23:48 log.44871837._072691.job.log.tgz.1
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas      7688 Jun  4 23:48 heartbeat.json
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas      6930 Jun  4 23:48 init_data.xml
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 23:48 boinc_mmap_file
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas        27 Jun  4 23:48 wrapper_checkpoint.txt
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas      4944 Jun  4 23:48 pilotlog.txt
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas    704975 Jun  4 23:48 log.44871837._072691.job.log.1
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas       357 Jun  4 23:48 output.list
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas       620 Jun  4 23:48 runtime_log
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas   1054720 Jun  4 23:48 result.tar.gz
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 23:48 runtime_log.err
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas       652 Jun  4 23:48 89RLDmheFe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFKSKDmCNl2Dm.diag
[2025-06-04 23:48:51] -rw-r--r--. 1 boincer umatlas     20959 Jun  4 23:48 stderr.txt
[2025-06-04 23:48:51] HITS file was successfully produced:
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas 197676530 Jun  4 23:47 shared/HITS.pool.root.1
[2025-06-04 23:48:51]  *** Contents of shared directory: ***
[2025-06-04 23:48:51] total 413292
[2025-06-04 23:48:51] -rw-r--r--. 2 boincer umatlas 223942780 Jun  4 21:39 ATLAS.root_0
[2025-06-04 23:48:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:39 start_atlas.sh
[2025-06-04 23:48:51] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 21:39 input.tar.gz
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas 197676530 Jun  4 23:47 HITS.pool.root.1
[2025-06-04 23:48:51] -rw-------. 1 boincer umatlas   1054720 Jun  4 23:48 result.tar.gz
23:48:52 (2603162): run_atlas exited; CPU time 40640.059242
23:48:52 (2603162): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN