Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:14:17 (822537): wrapper (7.7.26015): starting
04:14:17 (822537): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 04:14:17] Arguments: --nthreads 3
[2025-06-05 04:14:17] Threads: 3
[2025-06-05 04:14:17] Checking for CVMFS
[2025-06-05 04:14:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:14:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:14:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:14:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:14:17] 2.9.2.0 4037 2512 80776 146801 3 55 33622086 36864001 0 130560 0 2207457 99.992 544298 10044 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 04:14:17] CVMFS is ok
[2025-06-05 04:14:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:14:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:14:17] Further information can be found at the LHC@home message board.
[2025-06-05 04:14:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:14:17] Checking for apptainer binary...
[2025-06-05 04:14:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:14:17] Running /usr/bin/apptainer --version
[2025-06-05 04:14:17] apptainer version 1.3.6-6.1
[2025-06-05 04:14:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:14:17] atlasA217a
[2025-06-05 04:14:17] apptainer works
[2025-06-05 04:14:17] Set ATHENA_PROC_NUMBER=3
[2025-06-05 04:14:17] Set ATHENA_CORE_NUMBER=3
[2025-06-05 04:14:17] Starting ATLAS job with PandaID=6667202728
[2025-06-05 04:14:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:00:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | sum of square deviations: 348769330.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | sum of deviations: 6924177649.000001
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | mean x: 1749092823.5
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | mean y: 2345007.6346153845
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | -- intersect: -34722696424.4919
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | intersect: -34722696424.4919
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | chi2: 1.5670500486524108
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | sum of deviations: 6574049971.000001
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | mean x: 1749092671.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | mean y: 2343892.101010101
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | -- intersect: -38219015276.195206
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | intersect: -38219015276.195206
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | chi2: 1.5706010441112808
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | current chi2=1.5706010441112808 (change=-0.22660383195314227 %)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | right removable region: 98
[2025-06-05 06:00:21] 2025-06-05 04:00:09,418 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | sum of deviations: -4866864382.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | mean x: 1749092976.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | mean y: 2381270.222222222
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | -- intersect: 28298211819.961998
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | intersect: 28298211819.961998
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | chi2: 0.12206347301211046
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | current chi2=0.12206347301211046 (change=92.21062064245623 %)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | sum of square deviations: 257521107.5
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | sum of deviations: 322902218.9999998
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | mean x: 1749093128.5
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | mean y: 2362970.829787234
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | -- intersect: -2190801146.5243673
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | intersect: -2190801146.5243673
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | chi2: 0.03063448105157308
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | current chi2=0.03063448105157308 (change=74.90282695091454 %)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | sum of square deviations: 218571540.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | sum of deviations: 928620141.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,419 | INFO     | mean x: 1749093281.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | mean y: 2360797.3146067415
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | -- intersect: -7428813678.668738
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | intersect: -7428813678.668738
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | chi2: 0.0033457692789477396
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | current chi2=0.0033457692789477396 (change=89.07842025032139 %)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | sum of square deviations: 183761585.0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | sum of deviations: 498287131.50000006
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | mean x: 1749093433.5
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | mean y: 2362672.226190476
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | -- intersect: -4740471635.08674
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | intersect: -4740471635.08674
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | chi2: 0.0028185339025950107
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | current chi2=0.0028185339025950107 (change=15.758270591764983 %)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | left removable region: 40
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | sum of square deviations: 60482994.5
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | sum of deviations: -239825312.49999994
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | mean x: 1749093860.5
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | mean y: 2366666.7413793104
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | -- intersect: 6937819931.811511
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | intersect: 6937819931.811511
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | chi2: 0.001698611454209567
[2025-06-05 06:00:21] 2025-06-05 04:00:09,420 | INFO     | -- intersect: 6937819931.811511
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | current memory leak: -3.97 B/s (using 58 data points, chi2=0.00)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | ..............................
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | . Timing measurements:
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | . get job = 0 s
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | . initial setup = 1 s
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | . payload setup = 3 s
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | . stage-in = 0 s
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | . payload execution = 6319 s
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | . stage-out = 0 s
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | . log creation = 0 s
[2025-06-05 06:00:21] 2025-06-05 04:00:09,421 | INFO     | ..............................
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | 
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | job summary report
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | --------------------------------------------------
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | PanDA job id: 6667202728
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | task id: 44871837
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | errors: (none)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | pilot state: finished 
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | transexitcode: 0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | exeerrorcode: 0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | exeerrordiag: 
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | exitcode: 0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | exitmsg: OK
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | cpuconsumptiontime: 18363 s
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | nevents: 400
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | neventsw: 0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | pid: 832662
[2025-06-05 06:00:21] 2025-06-05 04:00:09,451 | INFO     | pgrp: 832662
[2025-06-05 06:00:21] 2025-06-05 04:00:09,452 | INFO     | corecount: 3
[2025-06-05 06:00:21] 2025-06-05 04:00:09,452 | INFO     | event service: False
[2025-06-05 06:00:21] 2025-06-05 04:00:09,452 | INFO     | sizes: {0: 2397395, 3: 2397601, 11: 2397629, 6326: 2424675, 6328: 2433622, 6329: 2433678, 6334: 2433976}
[2025-06-05 06:00:21] 2025-06-05 04:00:09,452 | INFO     | --------------------------------------------------
[2025-06-05 06:00:21] 2025-06-05 04:00:09,452 | INFO     | 
[2025-06-05 06:00:21] 2025-06-05 04:00:09,452 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | job 6667202728 has completed (purged errors)
[2025-06-05 06:00:21] 2025-06-05 04:00:09,464 | INFO     | overall cleanup function is called
[2025-06-05 06:00:21] 2025-06-05 04:00:10,471 | INFO     | --- collectZombieJob: --- 10, [832662]
[2025-06-05 06:00:21] 2025-06-05 04:00:10,471 | INFO     | zombie collector waiting for pid 832662
[2025-06-05 06:00:21] 2025-06-05 04:00:10,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:00:21] 2025-06-05 04:00:10,471 | INFO     | collected zombie processes
[2025-06-05 06:00:21] 2025-06-05 04:00:10,471 | INFO     | will attempt to kill all subprocesses of pid=832662
[2025-06-05 06:00:21] 2025-06-05 04:00:10,514 | INFO     | process IDs to be killed: [832662] (in reverse order)
[2025-06-05 06:00:21] 2025-06-05 04:00:10,537 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:00:21] 2025-06-05 04:00:10,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:00:21] 2025-06-05 04:00:10,538 | INFO     | did not find any defunct processes belonging to 832662
[2025-06-05 06:00:21] 2025-06-05 04:00:10,539 | INFO     | did not find any defunct processes belonging to 832662
[2025-06-05 06:00:21] 2025-06-05 04:00:10,539 | INFO     | ready for new job
[2025-06-05 06:00:21] 2025-06-05 04:00:10,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:00:21] 2025-06-05 04:00:10,540 | INFO     | **************************************
[2025-06-05 06:00:21] 2025-06-05 04:00:10,540 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:00:21] 2025-06-05 04:00:10,540 | INFO     | **************************************
[2025-06-05 06:00:21] 2025-06-05 04:00:10,540 | INFO     | 
[2025-06-05 06:00:21] 2025-06-05 04:00:10,540 | INFO     | architecture information:
[2025-06-05 06:00:21] 2025-06-05 04:00:10,540 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:00:21] 2025-06-05 04:00:10,549 | INFO     | cat /etc/os-release:
[2025-06-05 06:00:21] NAME="CentOS Linux"
[2025-06-05 06:00:21] VERSION="7 (Core)"
[2025-06-05 06:00:21] ID="centos"
[2025-06-05 06:00:21] ID_LIKE="rhel fedora"
[2025-06-05 06:00:21] VERSION_ID="7"
[2025-06-05 06:00:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:00:21] ANSI_COLOR="0;31"
[2025-06-05 06:00:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:00:21] HOME_URL="https://www.centos.org/"
[2025-06-05 06:00:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:00:21] 
[2025-06-05 06:00:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:00:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:00:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:00:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:00:21] 
[2025-06-05 06:00:21] 2025-06-05 04:00:10,550 | INFO     | **************************************
[2025-06-05 06:00:21] 2025-06-05 04:00:11,053 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 06:00:21] 2025-06-05 04:00:11,066 | INFO     | sufficient remaining disk space (323306389504 B)
[2025-06-05 06:00:21] 2025-06-05 04:00:11,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:00:21] 2025-06-05 04:00:11,066 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:00:21] 2025-06-05 04:00:11,066 | INFO     | update_server=False
[2025-06-05 06:00:21] 2025-06-05 04:00:11,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:00:21] 2025-06-05 04:00:11,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:00:21] 2025-06-05 04:00:11,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:00:21] 2025-06-05 04:00:11,067 | INFO     | aborting loop
[2025-06-05 06:00:21] 2025-06-05 04:00:11,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:00:21] 2025-06-05 04:00:11,398 | INFO     | all data control threads have been joined
[2025-06-05 06:00:21] 2025-06-05 04:00:11,403 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:00:21] 2025-06-05 04:00:11,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:00:21] 2025-06-05 04:00:11,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:00:21] 2025-06-05 04:00:11,509 | INFO     | all job control threads have been joined
[2025-06-05 06:00:21] 2025-06-05 04:00:11,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:00:21] 2025-06-05 04:00:11,807 | INFO     | all payload control threads have been joined
[2025-06-05 06:00:21] 2025-06-05 04:00:12,072 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,072 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,072 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,140 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,404 | INFO     | [data] control thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,503 | INFO     | [job] validate thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,515 | INFO     | [job] control thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,531 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,539 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,762 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:12,813 | INFO     | [payload] control thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:13,325 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:13,432 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:13,651 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:15,141 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:00:21] 2025-06-05 04:00:16,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139991655282496)>', '<ExcThread(monitor, started 139991019673344)>']
[2025-06-05 06:00:21] 2025-06-05 04:00:16,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:00:21] 2025-06-05 04:00:16,431 | INFO     | [monitor] control thread has ended
[2025-06-05 06:00:21] 2025-06-05 04:00:21,360 | INFO     | all workflow threads have been joined
[2025-06-05 06:00:21] 2025-06-05 04:00:21,360 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:00:21] 2025-06-05 04:00:21,360 | INFO     | traces error code: 0
[2025-06-05 06:00:21] 2025-06-05 04:00:21,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:00:21] 2025-06-05 04:00:21,411 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:00:21] 2025-06-05 04:00:21,414 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:00:21] 2025-06-05 04:00:21,416 [wrapper] pilotpid: 826171
[2025-06-05 06:00:21] 2025-06-05 04:00:21,418 [wrapper] Pilot exit status: 0
[2025-06-05 06:00:21] 2025-06-05 04:00:21,426 [wrapper] pandaids: 6667202728
[2025-06-05 06:00:21] 2025-06-05 04:00:21,441 [wrapper] cleanup supervisor_pilot  847530 826172
[2025-06-05 06:00:21] 2025-06-05 04:00:21,444 [wrapper] Test setup, not cleaning
[2025-06-05 06:00:21] 2025-06-05 04:00:21,446 [wrapper] apfmon messages muted
[2025-06-05 06:00:21] 2025-06-05 04:00:21,448 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:00:21] 2025-06-05 04:00:21,451 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:00:21]  *** Error codes and diagnostics ***
[2025-06-05 06:00:21]     "exeErrorCode": 0,
[2025-06-05 06:00:21]     "exeErrorDiag": "",
[2025-06-05 06:00:21]     "pilotErrorCode": 0,
[2025-06-05 06:00:21]     "pilotErrorDiag": "",
[2025-06-05 06:00:21]  *** Listing of results directory ***
[2025-06-05 06:00:21] total 422108
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc    495897 May 27 17:39 pilot3.tar.gz
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc      5111 May 27 17:46 queuedata.json
[2025-06-05 06:00:21] -rwx------ 1 boinc boinc     37140 May 27 17:47 runpilot2-wrapper.sh
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc       100 Jun  5 04:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:00:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 04:14 run_atlas
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc       105 Jun  5 04:14 job.xml
[2025-06-05 06:00:21] -rw-r--r-- 2 boinc boinc 227368773 Jun  5 04:14 EVNT.44871834._002741.pool.root.1
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc      6925 Jun  5 04:14 init_data.xml
[2025-06-05 06:00:21] drwxrwx--x 2 boinc boinc      4096 Jun  5 04:14 shared
[2025-06-05 06:00:21] -rw-r--r-- 2 boinc boinc    508883 Jun  5 04:14 input.tar.gz
[2025-06-05 06:00:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:14 start_atlas.sh
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc         0 Jun  5 04:14 boinc_lockfile
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc      2559 Jun  5 04:14 pandaJob.out
[2025-06-05 06:00:21] -rw------- 1 boinc boinc    987109 Jun  5 04:14 agis_schedconf.cvmfs.json
[2025-06-05 06:00:21] -rw------- 1 boinc boinc   1598969 Jun  5 04:14 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:00:21] drwx------ 4 boinc boinc      4096 Jun  5 04:14 pilot3
[2025-06-05 06:00:21] -rw------- 1 boinc boinc 199369925 Jun  5 05:59 HITS.44871837._069705.pool.root.1
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc       529 Jun  5 05:59 boinc_task_state.xml
[2025-06-05 06:00:21] -rw------- 1 boinc boinc        95 Jun  5 05:59 pilot_heartbeat.json
[2025-06-05 06:00:21] -rw------- 1 boinc boinc      1016 Jun  5 05:59 memory_monitor_summary.json
[2025-06-05 06:00:21] -rw------- 1 boinc boinc    231384 Jun  5 06:00 log.44871837._069705.job.log.tgz.1
[2025-06-05 06:00:21] -rw------- 1 boinc boinc      7675 Jun  5 06:00 heartbeat.json
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc      8192 Jun  5 06:00 boinc_mmap_file
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc        27 Jun  5 06:00 wrapper_checkpoint.txt
[2025-06-05 06:00:21] -rw------- 1 boinc boinc      4357 Jun  5 06:00 pilotlog.txt
[2025-06-05 06:00:21] -rw------- 1 boinc boinc    603934 Jun  5 06:00 log.44871837._069705.job.log.1
[2025-06-05 06:00:21] -rw------- 1 boinc boinc       357 Jun  5 06:00 output.list
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc       620 Jun  5 06:00 runtime_log
[2025-06-05 06:00:21] -rw------- 1 boinc boinc    849920 Jun  5 06:00 result.tar.gz
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc      8753 Jun  5 06:00 runtime_log.err
[2025-06-05 06:00:21] -rw------- 1 boinc boinc       663 Jun  5 06:00 hjDMDmqhBe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmI2RKDmNwCmbm.diag
[2025-06-05 06:00:21] -rw-r--r-- 1 boinc boinc     20674 Jun  5 06:00 stderr.txt
[2025-06-05 06:00:21] HITS file was successfully produced:
[2025-06-05 06:00:21] -rw------- 1 boinc boinc 199369925 Jun  5 05:59 shared/HITS.pool.root.1
[2025-06-05 06:00:21]  *** Contents of shared directory: ***
[2025-06-05 06:00:21] total 418096
[2025-06-05 06:00:21] -rw-r--r-- 2 boinc boinc 227368773 Jun  5 04:14 ATLAS.root_0
[2025-06-05 06:00:21] -rw-r--r-- 2 boinc boinc    508883 Jun  5 04:14 input.tar.gz
[2025-06-05 06:00:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:14 start_atlas.sh
[2025-06-05 06:00:21] -rw------- 1 boinc boinc 199369925 Jun  5 05:59 HITS.pool.root.1
[2025-06-05 06:00:21] -rw------- 1 boinc boinc    849920 Jun  5 06:00 result.tar.gz
06:00:23 (822537): run_atlas exited; CPU time 18384.852816
06:00:23 (822537): called boinc_finish(0)

</stderr_txt>
]]>

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