Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:27:16 (2269314): wrapper (7.7.26015): starting
21:27:16 (2269314): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:27:16] Arguments: --nthreads 8
[2025-06-04 21:27:16] Threads: 8
[2025-06-04 21:27:16] Checking for CVMFS
[2025-06-04 21:27:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:27:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:27:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:27:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:27:16] 2.12.6.0 9081 32279 549076 146800 1 221 18173757 32935937 14967 16776704 0 182812272 99.660 159784667 25947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 21:27:16] CVMFS is ok
[2025-06-04 21:27:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:27:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:27:16] Further information can be found at the LHC@home message board.
[2025-06-04 21:27:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:27:16] Checking for apptainer binary...
[2025-06-04 21:27:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:27:16] Running /usr/bin/apptainer --version
[2025-06-04 21:27:16] apptainer version 1.4.1-1.el9
[2025-06-04 21:27:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:27:17] c6-12-29-3.aglt2.org
[2025-06-04 21:27:17] apptainer works
[2025-06-04 21:27:17] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:27:17] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:27:17] Starting ATLAS job with PandaID=6668688233
[2025-06-04 21:27:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:41:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:41:55]  is_altstaged=None
[2025-06-04 22:41:55]  is_tar=False
[2025-06-04 22:41:55]  lfn=log.44871837._086921.job.log.tgz.1
[2025-06-04 22:41:55]  mtime=0
[2025-06-04 22:41:55]  protocol_id=None
[2025-06-04 22:41:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 22:41:55]  replicas=None
[2025-06-04 22:41:55]  scope=mc23_13p6TeV
[2025-06-04 22:41:55]  status=None
[2025-06-04 22:41:55]  status_code=0
[2025-06-04 22:41:55]  storage_token=
[2025-06-04 22:41:55]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6668688233/log.44871837._086921.job.log.tgz.1
[2025-06-04 22:41:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/bd/log.44871837._086921.job.log.tgz.1
[2025-06-04 22:41:55]  workdir=None
[2025-06-04 22:41:55] ]
[2025-06-04 22:41:55] 2025-06-05 02:41:27,516 | INFO     | transferring file log.44871837._086921.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668688233/log.44871837._086921.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 22:41:55] 2025-06-05 02:41:27,516 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668688233/log.44871837._086921.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._086921.job
[2025-06-04 22:41:55] 2025-06-05 02:41:27,535 | INFO     | adding to output.list: log.44871837._086921.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/bd/log.44871837._086921.job.log.tg
[2025-06-04 22:41:55] 2025-06-05 02:41:27,536 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 22:41:55] 2025-06-05 02:41:27,536 | INFO     | summary of transferred files:
[2025-06-04 22:41:55] 2025-06-05 02:41:27,536 | INFO     |  -- lfn=log.44871837._086921.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 22:41:55] 2025-06-05 02:41:27,536 | INFO     | stage-out finished correctly
[2025-06-04 22:41:55] 2025-06-05 02:41:28,161 | INFO     | PID=2275638 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 22:41:55] 2025-06-05 02:41:28,161 | INFO     | .. there are 28 such processes running
[2025-06-04 22:41:55] 2025-06-05 02:41:28,682 | INFO     | monitor loop #329: job 0:6668688233 is in state 'finished'
[2025-06-04 22:41:55] 2025-06-05 02:41:28,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:41:55] 2025-06-05 02:41:29,628 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 22:41:55] 2025-06-05 02:41:31,191 | INFO     | monitor loop #330: job 0:6668688233 is in state 'finished'
[2025-06-04 22:41:55] 2025-06-05 02:41:31,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:41:55] 2025-06-05 02:41:31,616 | INFO     | job 6668688233 has state=finished
[2025-06-04 22:41:55] 2025-06-05 02:41:31,617 | INFO     | preparing for final server update for job 6668688233 in state='finished'
[2025-06-04 22:41:55] 2025-06-05 02:41:31,618 | INFO     | this job has now completed (state=finished)
[2025-06-04 22:41:55] 2025-06-05 02:41:31,618 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 22:41:55] 2025-06-05 02:41:31,618 | INFO     | log transfer has been attempted: DONE
[2025-06-04 22:41:55] 2025-06-05 02:41:31,618 | INFO     | job 6668688233 has finished - writing final server update
[2025-06-04 22:41:55] 2025-06-05 02:41:31,619 | INFO     | total number of processed events: 400 (read)
[2025-06-04 22:41:55] 2025-06-05 02:41:31,636 | INFO     | executing command: lscpu
[2025-06-04 22:41:55] 2025-06-05 02:41:31,721 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 22:41:55] 2025-06-05 02:41:33,694 | INFO     | monitor loop #331: job 0:6668688233 is in state 'finished'
[2025-06-04 22:41:55] 2025-06-05 02:41:33,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:41:55] 2025-06-05 02:41:35,169 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 22:41:55] 2025-06-05 02:41:35,170 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668688233/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:41:55] 2025-06-05 02:41:35,171 | INFO     | extracted standard info from prmon json
[2025-06-04 22:41:55] 2025-06-05 02:41:35,171 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:41:55] 2025-06-05 02:41:35,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:41:55] 2025-06-05 02:41:35,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:41:55] 2025-06-05 02:41:35,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:41:55] 2025-06-05 02:41:35,174 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:41:55] 2025-06-05 02:41:35,174 | INFO     | sum of square deviations: 89127252.5
[2025-06-04 22:41:55] 2025-06-05 02:41:35,175 | INFO     | sum of deviations: -7078651792.0
[2025-06-04 22:41:55] 2025-06-05 02:41:35,175 | INFO     | mean x: 1749089161.5
[2025-06-04 22:41:55] 2025-06-05 02:41:35,175 | INFO     | mean y: 2313523.8181818184
[2025-06-04 22:41:55] 2025-06-05 02:41:35,175 | INFO     | -- intersect: 138918220613.1762
[2025-06-04 22:41:55] 2025-06-05 02:41:35,175 | INFO     | intersect: 138918220613.1762
[2025-06-04 22:41:55] 2025-06-05 02:41:35,175 | INFO     | chi2: 0.05964622409453946
[2025-06-04 22:41:55] 2025-06-05 02:41:35,175 | INFO     | -- intersect: 138918220613.1762
[2025-06-04 22:41:55] 2025-06-05 02:41:35,175 | INFO     | current memory leak: -79.42 B/s (using 66 data points, chi2=0.06)
[2025-06-04 22:41:55] 2025-06-05 02:41:35,176 | INFO     | ..............................
[2025-06-04 22:41:55] 2025-06-05 02:41:35,176 | INFO     | . Timing measurements:
[2025-06-04 22:41:55] 2025-06-05 02:41:35,176 | INFO     | . get job = 0 s
[2025-06-04 22:41:55] 2025-06-05 02:41:35,176 | INFO     | . initial setup = 2 s
[2025-06-04 22:41:55] 2025-06-05 02:41:35,176 | INFO     | . payload setup = 6 s
[2025-06-04 22:41:55] 2025-06-05 02:41:35,176 | INFO     | . stage-in = 0 s
[2025-06-04 22:41:55] 2025-06-05 02:41:35,176 | INFO     | . payload execution = 4413 s
[2025-06-04 22:41:55] 2025-06-05 02:41:35,176 | INFO     | . stage-out = 0 s
[2025-06-04 22:41:55] 2025-06-05 02:41:35,177 | INFO     | . log creation = 0 s
[2025-06-04 22:41:55] 2025-06-05 02:41:35,177 | INFO     | ..............................
[2025-06-04 22:41:55] 2025-06-05 02:41:35,270 | INFO     | 
[2025-06-04 22:41:55] 2025-06-05 02:41:35,270 | INFO     | job summary report
[2025-06-04 22:41:55] 2025-06-05 02:41:35,270 | INFO     | --------------------------------------------------
[2025-06-04 22:41:55] 2025-06-05 02:41:35,270 | INFO     | PanDA job id: 6668688233
[2025-06-04 22:41:55] 2025-06-05 02:41:35,270 | INFO     | task id: 44871837
[2025-06-04 22:41:55] 2025-06-05 02:41:35,270 | INFO     | errors: (none)
[2025-06-04 22:41:55] 2025-06-05 02:41:35,270 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | pilot state: finished 
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | transexitcode: 0
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | exeerrorcode: 0
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | exeerrordiag: 
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | exitcode: 0
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | exitmsg: OK
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | cpuconsumptiontime: 33388 s
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | nevents: 400
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | neventsw: 0
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | pid: 2290247
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | pgrp: 2290247
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | corecount: 8
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | event service: False
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 4423: 2423723, 4424: 2432664, 4426: 2432848, 4432: 2433018}
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | --------------------------------------------------
[2025-06-04 22:41:55] 2025-06-05 02:41:35,271 | INFO     | 
[2025-06-04 22:41:55] 2025-06-05 02:41:35,272 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 22:41:55] 2025-06-05 02:41:35,291 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:41:55] 2025-06-05 02:41:35,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,293 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:41:55] 2025-06-05 02:41:35,293 | INFO     | job 6668688233 has completed (purged errors)
[2025-06-04 22:41:55] 2025-06-05 02:41:35,293 | INFO     | overall cleanup function is called
[2025-06-04 22:41:55] 2025-06-05 02:41:36,301 | INFO     | --- collectZombieJob: --- 10, [2290247]
[2025-06-04 22:41:55] 2025-06-05 02:41:36,301 | INFO     | zombie collector waiting for pid 2290247
[2025-06-04 22:41:55] 2025-06-05 02:41:36,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:41:55] 2025-06-05 02:41:36,301 | INFO     | collected zombie processes
[2025-06-04 22:41:55] 2025-06-05 02:41:36,302 | INFO     | will attempt to kill all subprocesses of pid=2290247
[2025-06-04 22:41:55] 2025-06-05 02:41:36,646 | INFO     | process IDs to be killed: [2290247] (in reverse order)
[2025-06-04 22:41:55] 2025-06-05 02:41:36,756 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:41:55] 2025-06-05 02:41:36,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:41:55] 2025-06-05 02:41:36,771 | INFO     | did not find any defunct processes belonging to 2290247
[2025-06-04 22:41:55] 2025-06-05 02:41:36,785 | INFO     | did not find any defunct processes belonging to 2290247
[2025-06-04 22:41:55] 2025-06-05 02:41:36,785 | INFO     | ready for new job
[2025-06-04 22:41:55] 2025-06-05 02:41:36,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:41:55] 2025-06-05 02:41:36,787 | INFO     | **************************************
[2025-06-04 22:41:55] 2025-06-05 02:41:36,787 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:41:55] 2025-06-05 02:41:36,787 | INFO     | **************************************
[2025-06-04 22:41:55] 2025-06-05 02:41:36,787 | INFO     | 
[2025-06-04 22:41:55] 2025-06-05 02:41:36,805 | INFO     | architecture information:
[2025-06-04 22:41:55] 2025-06-05 02:41:36,805 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:41:55] 2025-06-05 02:41:36,822 | INFO     | cat /etc/os-release:
[2025-06-04 22:41:55] NAME="CentOS Linux"
[2025-06-04 22:41:55] VERSION="7 (Core)"
[2025-06-04 22:41:55] ID="centos"
[2025-06-04 22:41:55] ID_LIKE="rhel fedora"
[2025-06-04 22:41:55] VERSION_ID="7"
[2025-06-04 22:41:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:41:55] ANSI_COLOR="0;31"
[2025-06-04 22:41:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:41:55] HOME_URL="https://www.centos.org/"
[2025-06-04 22:41:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:41:55] 
[2025-06-04 22:41:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:41:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:41:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:41:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:41:55] 
[2025-06-04 22:41:55] 2025-06-05 02:41:36,822 | INFO     | **************************************
[2025-06-04 22:41:55] 2025-06-05 02:41:37,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 22:41:55] 2025-06-05 02:41:37,343 | INFO     | sufficient remaining disk space (95943655424 B)
[2025-06-04 22:41:55] 2025-06-05 02:41:37,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:41:55] 2025-06-05 02:41:37,346 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:41:55] 2025-06-05 02:41:37,346 | INFO     | update_server=False
[2025-06-04 22:41:55] 2025-06-05 02:41:37,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:41:55] 2025-06-05 02:41:37,346 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:41:55] 2025-06-05 02:41:37,347 | INFO     | aborting loop
[2025-06-04 22:41:55] 2025-06-05 02:41:37,989 | INFO     | all data control threads have been joined
[2025-06-04 22:41:55] 2025-06-05 02:41:38,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:41:55] 2025-06-05 02:41:38,187 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:41:55] 2025-06-05 02:41:38,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:41:55] 2025-06-05 02:41:38,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:41:55] 2025-06-05 02:41:38,352 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:38,352 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:38,372 | INFO     | all payload control threads have been joined
[2025-06-04 22:41:55] 2025-06-05 02:41:38,903 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:38,994 | INFO     | [data] control thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:39,049 | INFO     | all job control threads have been joined
[2025-06-04 22:41:55] 2025-06-05 02:41:39,167 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:39,193 | INFO     | [job] validate thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:39,377 | INFO     | [payload] control thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:39,378 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:39,520 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:39,610 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:39,891 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:40,055 | INFO     | [job] control thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:40,146 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:40,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:41:55] 2025-06-05 02:41:40,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:41:55] 2025-06-05 02:41:41,286 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:44,225 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:47,936 | INFO     | job.realtimelogging is not enabled
[2025-06-04 22:41:55] 2025-06-05 02:41:48,939 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:41:55] 2025-06-05 02:41:50,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926956681024)>', '<ExcThread(monitor, started 139926452553472)>']
[2025-06-04 22:41:55] 2025-06-05 02:41:50,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:41:55] 2025-06-05 02:41:50,239 | INFO     | [monitor] control thread has ended
[2025-06-04 22:41:55] 2025-06-05 02:41:55,251 | INFO     | all workflow threads have been joined
[2025-06-04 22:41:55] 2025-06-05 02:41:55,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:41:55] 2025-06-05 02:41:55,251 | INFO     | traces error code: 0
[2025-06-04 22:41:55] 2025-06-05 02:41:55,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:41:55] 2025-06-05 02:41:55,431 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:41:55] 2025-06-05 02:41:55,434 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:41:55] 2025-06-05 02:41:55,438 [wrapper] pilotpid: 2275638
[2025-06-04 22:41:55] 2025-06-05 02:41:55,441 [wrapper] Pilot exit status: 0
[2025-06-04 22:41:55] 2025-06-05 02:41:55,451 [wrapper] pandaids: 6668688233
[2025-06-04 22:41:55] 2025-06-05 02:41:55,507 [wrapper] cleanup supervisor_pilot 2559262 2275639
[2025-06-04 22:41:55] 2025-06-05 02:41:55,509 [wrapper] Test setup, not cleaning
[2025-06-04 22:41:55] 2025-06-05 02:41:55,512 [wrapper] apfmon messages muted
[2025-06-04 22:41:55] 2025-06-05 02:41:55,514 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:41:55] 2025-06-05 02:41:55,517 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:41:55]  *** Error codes and diagnostics ***
[2025-06-04 22:41:55]     "exeErrorCode": 0,
[2025-06-04 22:41:55]     "exeErrorDiag": "",
[2025-06-04 22:41:55]     "pilotErrorCode": 0,
[2025-06-04 22:41:55]     "pilotErrorDiag": "",
[2025-06-04 22:41:55]  *** Listing of results directory ***
[2025-06-04 22:41:55] total 423916
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-04 22:41:55] -rwx------. 1 boincer umatlas     37140 May 28 12:12 runpilot2-wrapper.sh
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas      5111 May 28 12:12 queuedata.json
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas       100 Jun  4 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:41:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 21:27 run_atlas
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas       105 Jun  4 21:27 job.xml
[2025-06-04 22:41:55] -rw-r--r--. 2 boincer umatlas 224753529 Jun  4 21:27 EVNT.44871834._003385.pool.root.1
[2025-06-04 22:41:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:27 start_atlas.sh
[2025-06-04 22:41:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 21:27 shared
[2025-06-04 22:41:55] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 21:27 input.tar.gz
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas         0 Jun  4 21:27 boinc_lockfile
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 21:27 pandaJob.out
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas    987109 Jun  4 21:27 agis_schedconf.cvmfs.json
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas   1598969 Jun  4 21:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:41:55] drwx------. 4 boincer umatlas      4096 Jun  4 21:27 pilot3
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 22:38 init_data.xml
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas 203999377 Jun  4 22:40 HITS.44871837._086921.pool.root.1
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas       529 Jun  4 22:41 boinc_task_state.xml
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas        95 Jun  4 22:41 pilot_heartbeat.json
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas      1038 Jun  4 22:41 memory_monitor_summary.json
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 22:41 boinc_mmap_file
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas        27 Jun  4 22:41 wrapper_checkpoint.txt
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas    316088 Jun  4 22:41 log.44871837._086921.job.log.tgz.1
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas      7723 Jun  4 22:41 heartbeat.json
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas      4425 Jun  4 22:41 pilotlog.txt
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas    437348 Jun  4 22:41 log.44871837._086921.job.log.1
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas       357 Jun  4 22:41 output.list
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas       620 Jun  4 22:41 runtime_log
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas    768000 Jun  4 22:41 result.tar.gz
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 22:41 runtime_log.err
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas       653 Jun  4 22:41 nB7NDmQZYe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9jTKDmGO2hXo.diag
[2025-06-04 22:41:55] -rw-r--r--. 1 boincer umatlas     21473 Jun  4 22:41 stderr.txt
[2025-06-04 22:41:55] HITS file was successfully produced:
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas 203999377 Jun  4 22:40 shared/HITS.pool.root.1
[2025-06-04 22:41:55]  *** Contents of shared directory: ***
[2025-06-04 22:41:55] total 419984
[2025-06-04 22:41:55] -rw-r--r--. 2 boincer umatlas 224753529 Jun  4 21:27 ATLAS.root_0
[2025-06-04 22:41:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:27 start_atlas.sh
[2025-06-04 22:41:55] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 21:27 input.tar.gz
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas 203999377 Jun  4 22:40 HITS.pool.root.1
[2025-06-04 22:41:55] -rw-------. 1 boincer umatlas    768000 Jun  4 22:41 result.tar.gz
22:41:56 (2269314): run_atlas exited; CPU time 33567.544591
22:41:56 (2269314): called boinc_finish(0)

</stderr_txt>
]]>

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