Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:26:40 (1095397): wrapper (7.7.26015): starting
03:26:40 (1095397): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 03:26:40] Arguments: --nthreads 3
[2025-06-05 03:26:40] Threads: 3
[2025-06-05 03:26:40] Checking for CVMFS
[2025-06-05 03:26:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:26:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:26:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:26:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:26:43] 2.9.2.0 1095593 0 29660 146800 3 1 31790590 36864000 0 130560 0 0 0.000 1290 875 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 03:26:43] CVMFS is ok
[2025-06-05 03:26:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:26:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:26:43] Further information can be found at the LHC@home message board.
[2025-06-05 03:26:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:26:43] Checking for apptainer binary...
[2025-06-05 03:26:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:26:43] Running /usr/bin/apptainer --version
[2025-06-05 03:26:43] apptainer version 1.3.6-6.1
[2025-06-05 03:26:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:26:43] atlasA303a
[2025-06-05 03:26:43] apptainer works
[2025-06-05 03:26:43] Set ATHENA_PROC_NUMBER=3
[2025-06-05 03:26:43] Set ATHENA_CORE_NUMBER=3
[2025-06-05 03:26:43] Starting ATLAS job with PandaID=6667666866
[2025-06-05 03:26:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:05:32]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:05:32]  filesize=224426
[2025-06-05 05:05:32]  filetype=log
[2025-06-05 05:05:32]  guid=ccbb2a51-fa49-47dc-a312-987b38b54bce
[2025-06-05 05:05:32]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 05:05:32]  is_altstaged=None
[2025-06-05 05:05:32]  is_tar=False
[2025-06-05 05:05:32]  lfn=log.44871837._073870.job.log.tgz.1
[2025-06-05 05:05:32]  mtime=0
[2025-06-05 05:05:32]  protocol_id=None
[2025-06-05 05:05:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 05:05:32]  replicas=None
[2025-06-05 05:05:32]  scope=mc23_13p6TeV
[2025-06-05 05:05:32]  status=None
[2025-06-05 05:05:32]  status_code=0
[2025-06-05 05:05:32]  storage_token=
[2025-06-05 05:05:32]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6667666866/log.44871837._073870.job.log.tgz.1
[2025-06-05 05:05:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/3c/log.44871837._073870.job.log.tgz.1
[2025-06-05 05:05:32]  workdir=None
[2025-06-05 05:05:32] ]
[2025-06-05 05:05:32] 2025-06-05 03:04:48,246 | INFO     | transferring file log.44871837._073870.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6667666866/log.44871837._073870.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 05:05:32] 2025-06-05 03:04:48,246 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6667666866/log.44871837._073870.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0738
[2025-06-05 05:05:32] 2025-06-05 03:04:48,260 | INFO     | adding to output.list: log.44871837._073870.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/3c/log.44871837._073870.job.log.tg
[2025-06-05 05:05:32] 2025-06-05 03:04:48,261 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 05:05:32] 2025-06-05 03:04:48,261 | INFO     | summary of transferred files:
[2025-06-05 05:05:32] 2025-06-05 03:04:48,261 | INFO     |  -- lfn=log.44871837._073870.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 05:05:32] 2025-06-05 03:04:48,261 | INFO     | stage-out finished correctly
[2025-06-05 05:05:32] 2025-06-05 03:04:48,931 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 05:05:32] 2025-06-05 03:04:48,963 | INFO     | job 6667666866 has state=finished
[2025-06-05 05:05:32] 2025-06-05 03:04:48,963 | INFO     | preparing for final server update for job 6667666866 in state='finished'
[2025-06-05 05:05:32] 2025-06-05 03:04:48,963 | INFO     | this job has now completed (state=finished)
[2025-06-05 05:05:32] 2025-06-05 03:04:48,963 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 05:05:32] 2025-06-05 03:04:48,963 | INFO     | log transfer has been attempted: DONE
[2025-06-05 05:05:32] 2025-06-05 03:04:48,964 | INFO     | job 6667666866 has finished - writing final server update
[2025-06-05 05:05:32] 2025-06-05 03:04:48,964 | INFO     | total number of processed events: 400 (read)
[2025-06-05 05:05:32] 2025-06-05 03:04:48,965 | INFO     | executing command: lscpu
[2025-06-05 05:05:32] 2025-06-05 03:04:48,979 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 05:05:32] 2025-06-05 03:04:50,356 | INFO     | monitor loop #452: job 0:6667666866 is in state 'finished'
[2025-06-05 05:05:32] 2025-06-05 03:04:50,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:05:32] 2025-06-05 03:04:50,687 | INFO     | PID=1099590 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 05:05:32] 2025-06-05 03:04:51,396 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 05:05:32] 2025-06-05 03:04:51,396 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6667666866/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:05:32] 2025-06-05 03:04:51,397 | INFO     | extracted standard info from prmon json
[2025-06-05 05:05:32] 2025-06-05 03:04:51,397 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:05:32] 2025-06-05 03:04:51,397 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:05:32] 2025-06-05 03:04:51,397 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:05:32] 2025-06-05 03:04:51,397 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | sum of square deviations: 218571540.0
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | sum of deviations: -16028299061.0
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | mean x: 1749089820.0
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | mean y: 2463051.1235955055
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | -- intersect: 128266804874.9066
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | intersect: 128266804874.9066
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | chi2: 0.07338085841736178
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | -- intersect: 128266804874.9066
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | current memory leak: -73.33 B/s (using 89 data points, chi2=0.07)
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | ..............................
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | . Timing measurements:
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | . get job = 0 s
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | . initial setup = 1 s
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | . payload setup = 3 s
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | . stage-in = 0 s
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | . payload execution = 5857 s
[2025-06-05 05:05:32] 2025-06-05 03:04:51,398 | INFO     | . stage-out = 0 s
[2025-06-05 05:05:32] 2025-06-05 03:04:51,399 | INFO     | . log creation = 0 s
[2025-06-05 05:05:32] 2025-06-05 03:04:51,399 | INFO     | ..............................
[2025-06-05 05:05:32] 2025-06-05 03:04:51,880 | INFO     | 
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | job summary report
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | --------------------------------------------------
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | PanDA job id: 6667666866
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | task id: 44871837
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | errors: (none)
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | pilot state: finished 
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | transexitcode: 0
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | exeerrorcode: 0
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | exeerrordiag: 
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | exitcode: 0
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | exitmsg: OK
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | cpuconsumptiontime: 16970 s
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | nevents: 400
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | neventsw: 0
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | pid: 1106089
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | pgrp: 1106089
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | corecount: 3
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | event service: False
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | sizes: {0: 2397393, 3: 2397599, 11: 2397627, 5864: 2424341, 5865: 2433344, 5868: 2433458}
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | --------------------------------------------------
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | 
[2025-06-05 05:05:32] 2025-06-05 03:04:51,881 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 05:05:32] 2025-06-05 03:04:51,896 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | job 6667666866 has completed (purged errors)
[2025-06-05 05:05:32] 2025-06-05 03:04:51,897 | INFO     | overall cleanup function is called
[2025-06-05 05:05:32] 2025-06-05 03:04:52,904 | INFO     | --- collectZombieJob: --- 10, [1106089]
[2025-06-05 05:05:32] 2025-06-05 03:04:52,904 | INFO     | zombie collector waiting for pid 1106089
[2025-06-05 05:05:32] 2025-06-05 03:04:52,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:05:32] 2025-06-05 03:04:52,904 | INFO     | collected zombie processes
[2025-06-05 05:05:32] 2025-06-05 03:04:52,904 | INFO     | will attempt to kill all subprocesses of pid=1106089
[2025-06-05 05:05:32] 2025-06-05 03:04:52,946 | INFO     | process IDs to be killed: [1106089] (in reverse order)
[2025-06-05 05:05:32] 2025-06-05 03:04:52,972 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:05:32] 2025-06-05 03:04:52,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:05:32] 2025-06-05 03:04:52,973 | INFO     | did not find any defunct processes belonging to 1106089
[2025-06-05 05:05:32] 2025-06-05 03:04:52,974 | INFO     | did not find any defunct processes belonging to 1106089
[2025-06-05 05:05:32] 2025-06-05 03:04:52,974 | INFO     | ready for new job
[2025-06-05 05:05:32] 2025-06-05 03:04:52,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:05:32] 2025-06-05 03:04:52,975 | INFO     | **************************************
[2025-06-05 05:05:32] 2025-06-05 03:04:52,975 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:05:32] 2025-06-05 03:04:52,975 | INFO     | **************************************
[2025-06-05 05:05:32] 2025-06-05 03:04:52,975 | INFO     | 
[2025-06-05 05:05:32] 2025-06-05 03:04:52,976 | INFO     | architecture information:
[2025-06-05 05:05:32] 2025-06-05 03:04:52,976 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:05:32] 2025-06-05 03:04:52,985 | INFO     | cat /etc/os-release:
[2025-06-05 05:05:32] NAME="CentOS Linux"
[2025-06-05 05:05:32] VERSION="7 (Core)"
[2025-06-05 05:05:32] ID="centos"
[2025-06-05 05:05:32] ID_LIKE="rhel fedora"
[2025-06-05 05:05:32] VERSION_ID="7"
[2025-06-05 05:05:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:05:32] ANSI_COLOR="0;31"
[2025-06-05 05:05:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:05:32] HOME_URL="https://www.centos.org/"
[2025-06-05 05:05:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:05:32] 
[2025-06-05 05:05:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:05:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:05:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:05:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:05:32] 
[2025-06-05 05:05:32] 2025-06-05 03:04:52,985 | INFO     | **************************************
[2025-06-05 05:05:32] 2025-06-05 03:04:53,488 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | INFO     | sufficient remaining disk space (369958584320 B)
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | INFO     | update_server=False
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:05:32] 2025-06-05 03:04:53,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:05:32] 2025-06-05 03:04:53,653 | INFO     | all job control threads have been joined
[2025-06-05 05:05:32] 2025-06-05 03:04:53,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:05:32] 2025-06-05 03:04:53,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:05:32] 2025-06-05 03:04:53,865 | INFO     | aborting loop
[2025-06-05 05:05:32] 2025-06-05 03:04:54,508 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:54,516 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:54,561 | INFO     | all data control threads have been joined
[2025-06-05 05:05:32] 2025-06-05 03:04:54,577 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:54,578 | INFO     | all payload control threads have been joined
[2025-06-05 05:05:32] 2025-06-05 03:04:54,659 | INFO     | [job] control thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:54,705 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:54,870 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:54,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:05:32] 2025-06-05 03:04:55,140 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:55,548 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:55,567 | INFO     | [data] control thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:55,583 | INFO     | [payload] control thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:55,806 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:55,890 | INFO     | [job] validate thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:55,980 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:56,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:05:32] 2025-06-05 03:04:57,447 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:04:58,977 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:05:04,172 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:05:32] 2025-06-05 03:05:05,178 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:05:32] 2025-06-05 03:05:05,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621791561536)>', '<ExcThread(monitor, started 140621306124032)>']
[2025-06-05 05:05:32] 2025-06-05 03:05:05,567 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:05:32] 2025-06-05 03:05:05,567 | INFO     | [monitor] control thread has ended
[2025-06-05 05:05:32] 2025-06-05 03:05:10,511 | INFO     | all workflow threads have been joined
[2025-06-05 05:05:32] 2025-06-05 03:05:10,511 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:05:32] 2025-06-05 03:05:10,511 | INFO     | traces error code: 0
[2025-06-05 05:05:32] 2025-06-05 03:05:10,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:05:32] 2025-06-05 03:05:10,563 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:05:32] 2025-06-05 03:05:10,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:05:32] 2025-06-05 03:05:10,568 [wrapper] pilotpid: 1099590
[2025-06-05 05:05:32] 2025-06-05 03:05:10,571 [wrapper] Pilot exit status: 0
[2025-06-05 05:05:32] 2025-06-05 03:05:10,579 [wrapper] pandaids: 6667666866
[2025-06-05 05:05:32] 2025-06-05 03:05:10,595 [wrapper] cleanup supervisor_pilot 1118179 1099591
[2025-06-05 05:05:32] 2025-06-05 03:05:10,598 [wrapper] Test setup, not cleaning
[2025-06-05 05:05:32] 2025-06-05 03:05:10,600 [wrapper] apfmon messages muted
[2025-06-05 05:05:32] 2025-06-05 03:05:10,603 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:05:32] 2025-06-05 03:05:10,605 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:05:32]  *** Error codes and diagnostics ***
[2025-06-05 05:05:32]     "exeErrorCode": 0,
[2025-06-05 05:05:32]     "exeErrorDiag": "",
[2025-06-05 05:05:32]     "pilotErrorCode": 0,
[2025-06-05 05:05:32]     "pilotErrorDiag": "",
[2025-06-05 05:05:32]  *** Listing of results directory ***
[2025-06-05 05:05:32] total 417072
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc    495897 May 27 23:39 pilot3.tar.gz
[2025-06-05 05:05:32] -rwx------ 1 boinc boinc     37140 May 27 23:50 runpilot2-wrapper.sh
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc      5111 May 27 23:50 queuedata.json
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc       100 Jun  5 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:05:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 03:26 run_atlas
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc       105 Jun  5 03:26 job.xml
[2025-06-05 05:05:32] -rw-r--r-- 2 boinc boinc 223540991 Jun  5 03:26 EVNT.44871834._002896.pool.root.1
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc      6933 Jun  5 03:26 init_data.xml
[2025-06-05 05:05:32] drwxrwx--x 2 boinc boinc      4096 Jun  5 03:26 shared
[2025-06-05 05:05:32] -rw-r--r-- 2 boinc boinc    508874 Jun  5 03:26 input.tar.gz
[2025-06-05 05:05:32] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:26 start_atlas.sh
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc         0 Jun  5 03:26 boinc_lockfile
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc      2558 Jun  5 03:26 pandaJob.out
[2025-06-05 05:05:32] -rw------- 1 boinc boinc    987109 Jun  5 03:26 agis_schedconf.cvmfs.json
[2025-06-05 05:05:32] -rw------- 1 boinc boinc   1598969 Jun  5 03:26 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:05:32] drwx------ 4 boinc boinc      4096 Jun  5 03:26 pilot3
[2025-06-05 05:05:32] -rw------- 1 boinc boinc        95 Jun  5 05:04 pilot_heartbeat.json
[2025-06-05 05:05:32] -rw------- 1 boinc boinc 198129939 Jun  5 05:04 HITS.44871837._073870.pool.root.1
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc       529 Jun  5 05:04 boinc_task_state.xml
[2025-06-05 05:05:32] -rw------- 1 boinc boinc      1013 Jun  5 05:04 memory_monitor_summary.json
[2025-06-05 05:05:32] -rw------- 1 boinc boinc    224426 Jun  5 05:04 log.44871837._073870.job.log.tgz.1
[2025-06-05 05:05:32] -rw------- 1 boinc boinc      7650 Jun  5 05:04 heartbeat.json
[2025-06-05 05:05:32] -rw------- 1 boinc boinc      4552 Jun  5 05:05 pilotlog.txt
[2025-06-05 05:05:32] -rw------- 1 boinc boinc    562413 Jun  5 05:05 log.44871837._073870.job.log.1
[2025-06-05 05:05:32] -rw------- 1 boinc boinc       357 Jun  5 05:05 output.list
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc       620 Jun  5 05:05 runtime_log
[2025-06-05 05:05:32] -rw------- 1 boinc boinc    808960 Jun  5 05:05 result.tar.gz
[2025-06-05 05:05:32] -rw------- 1 boinc boinc       662 Jun  5 05:05 zSENDmlMHe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXTaKDm1quufn.diag
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc      8753 Jun  5 05:05 runtime_log.err
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc      8192 Jun  5 05:05 boinc_mmap_file
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc        27 Jun  5 05:05 wrapper_checkpoint.txt
[2025-06-05 05:05:32] -rw-r--r-- 1 boinc boinc     21166 Jun  5 05:05 stderr.txt
[2025-06-05 05:05:32] HITS file was successfully produced:
[2025-06-05 05:05:32] -rw------- 1 boinc boinc 198129939 Jun  5 05:04 shared/HITS.pool.root.1
[2025-06-05 05:05:32]  *** Contents of shared directory: ***
[2025-06-05 05:05:32] total 413108
[2025-06-05 05:05:32] -rw-r--r-- 2 boinc boinc 223540991 Jun  5 03:26 ATLAS.root_0
[2025-06-05 05:05:32] -rw-r--r-- 2 boinc boinc    508874 Jun  5 03:26 input.tar.gz
[2025-06-05 05:05:32] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:26 start_atlas.sh
[2025-06-05 05:05:32] -rw------- 1 boinc boinc 198129939 Jun  5 05:04 HITS.pool.root.1
[2025-06-05 05:05:32] -rw------- 1 boinc boinc    808960 Jun  5 05:05 result.tar.gz
05:05:34 (1095397): run_atlas exited; CPU time 16987.745827
05:05:34 (1095397): called boinc_finish(0)

</stderr_txt>
]]>

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