Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:39:28 (19668): wrapper (7.7.26015): starting
14:39:28 (19668): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 14:39:28] Arguments: --nthreads 8
[2025-06-05 14:39:28] Threads: 8
[2025-06-05 14:39:28] Checking for CVMFS
[2025-06-05 14:39:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:39:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:39:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:39:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:39:30] 2.11.2.0 16537 34659 90756 146819 1 16 14893737 25165825 4684 130560 0 17782649 99.789 20205217 2159 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 14:39:30] CVMFS is ok
[2025-06-05 14:39:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:39:30] Checking for apptainer binary...
[2025-06-05 14:39:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:39:30] Running /usr/bin/apptainer --version
[2025-06-05 14:39:30] apptainer version 1.3.2-1.el7
[2025-06-05 14:39:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:39:35] cg-vwn365.simple-grid.lan
[2025-06-05 14:39:35] apptainer works
[2025-06-05 14:39:35] Set ATHENA_PROC_NUMBER=8
[2025-06-05 14:39:35] Set ATHENA_CORE_NUMBER=8
[2025-06-05 14:39:36] Starting ATLAS job with PandaID=6667435301
[2025-06-05 14:39:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:17:29]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:17:29] 2025-06-05 18:11:18,341 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 20:17:29] 2025-06-05 18:11:18,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 20:17:29] 2025-06-05 18:11:18,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 20:17:29] 2025-06-05 18:11:18,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 20:17:29] 2025-06-05 18:11:18,348 | INFO     | fitting pss+swap vs Time
[2025-06-05 20:17:29] 2025-06-05 18:11:18,349 | INFO     | sum of square deviations: 9599817202.5
[2025-06-05 20:17:29] 2025-06-05 18:11:18,352 | INFO     | sum of deviations: 141803044391.99997
[2025-06-05 20:17:29] 2025-06-05 18:11:18,352 | INFO     | mean x: 1749137413.5
[2025-06-05 20:17:29] 2025-06-05 18:11:18,352 | INFO     | mean y: 2441592.121019108
[2025-06-05 20:17:29] 2025-06-05 18:11:18,352 | INFO     | -- intersect: -25834822291.367863
[2025-06-05 20:17:29] 2025-06-05 18:11:18,352 | INFO     | intersect: -25834822291.367863
[2025-06-05 20:17:29] 2025-06-05 18:11:18,353 | INFO     | chi2: 7.34144128609828
[2025-06-05 20:17:29] 2025-06-05 18:11:18,353 | INFO     | sum of square deviations: 9148487810.0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,356 | INFO     | sum of deviations: 160930525191.0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,357 | INFO     | mean x: 1749137261.0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,357 | INFO     | mean y: 2447960.8381877025
[2025-06-05 20:17:29] 2025-06-05 18:11:18,357 | INFO     | -- intersect: -30766525435.63806
[2025-06-05 20:17:29] 2025-06-05 18:11:18,357 | INFO     | intersect: -30766525435.63806
[2025-06-05 20:17:29] 2025-06-05 18:11:18,357 | INFO     | chi2: 6.559164603012685
[2025-06-05 20:17:29] 2025-06-05 18:11:18,357 | INFO     | current chi2=6.559164603012685 (change=10.655628133496215 %)
[2025-06-05 20:17:29] 2025-06-05 18:11:18,358 | INFO     | right removable region: 308
[2025-06-05 20:17:29] 2025-06-05 18:11:18,358 | INFO     | sum of square deviations: 9148487810.0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,361 | INFO     | sum of deviations: 31759736010.000008
[2025-06-05 20:17:29] 2025-06-05 18:11:18,361 | INFO     | mean x: 1749137566.0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,361 | INFO     | mean y: 2478756.3203883497
[2025-06-05 20:17:29] 2025-06-05 18:11:18,362 | INFO     | -- intersect: -6069797722.051393
[2025-06-05 20:17:29] 2025-06-05 18:11:18,362 | INFO     | intersect: -6069797722.051393
[2025-06-05 20:17:29] 2025-06-05 18:11:18,362 | INFO     | chi2: 2.5102892863779473
[2025-06-05 20:17:29] 2025-06-05 18:11:18,362 | INFO     | current chi2=2.5102892863779473 (change=65.80658771825337 %)
[2025-06-05 20:17:29] 2025-06-05 18:11:18,363 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,366 | INFO     | sum of deviations: -26845775205.499996
[2025-06-05 20:17:29] 2025-06-05 18:11:18,366 | INFO     | mean x: 1749137718.5
[2025-06-05 20:17:29] 2025-06-05 18:11:18,366 | INFO     | mean y: 2499127.4440789474
[2025-06-05 20:17:29] 2025-06-05 18:11:18,366 | INFO     | -- intersect: 5392706564.019553
[2025-06-05 20:17:29] 2025-06-05 18:11:18,366 | INFO     | intersect: 5392706564.019553
[2025-06-05 20:17:29] 2025-06-05 18:11:18,367 | INFO     | chi2: 0.9640070756803234
[2025-06-05 20:17:29] 2025-06-05 18:11:18,367 | INFO     | current chi2=0.9640070756803234 (change=61.59776959127796 %)
[2025-06-05 20:17:29] 2025-06-05 18:11:18,367 | INFO     | sum of square deviations: 8288713550.0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,370 | INFO     | sum of deviations: -29894241269.000004
[2025-06-05 20:17:29] 2025-06-05 18:11:18,371 | INFO     | mean x: 1749137871.0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,371 | INFO     | mean y: 2500205.7591973245
[2025-06-05 20:17:29] 2025-06-05 18:11:18,371 | INFO     | -- intersect: 6310976088.415198
[2025-06-05 20:17:29] 2025-06-05 18:11:18,371 | INFO     | intersect: 6310976088.415198
[2025-06-05 20:17:29] 2025-06-05 18:11:18,371 | INFO     | chi2: 0.9403080950846386
[2025-06-05 20:17:29] 2025-06-05 18:11:18,371 | INFO     | current chi2=0.9403080950846386 (change=2.458382432406921 %)
[2025-06-05 20:17:29] 2025-06-05 18:11:18,372 | INFO     | left removable region: 30
[2025-06-05 20:17:29] 2025-06-05 18:11:18,372 | INFO     | sum of square deviations: 6662039329.5
[2025-06-05 20:17:29] 2025-06-05 18:11:18,374 | INFO     | sum of deviations: 10607499504.499994
[2025-06-05 20:17:29] 2025-06-05 18:11:18,375 | INFO     | mean x: 1749138145.5
[2025-06-05 20:17:29] 2025-06-05 18:11:18,375 | INFO     | mean y: 2500161.2338129496
[2025-06-05 20:17:29] 2025-06-05 18:11:18,375 | INFO     | -- intersect: -2782530231.7173204
[2025-06-05 20:17:29] 2025-06-05 18:11:18,375 | INFO     | intersect: -2782530231.7173204
[2025-06-05 20:17:29] 2025-06-05 18:11:18,376 | INFO     | chi2: 0.0004241779501156744
[2025-06-05 20:17:29] 2025-06-05 18:11:18,376 | INFO     | -- intersect: -2782530231.7173204
[2025-06-05 20:17:29] 2025-06-05 18:11:18,376 | INFO     | current memory leak: 1.59 B/s (using 278 data points, chi2=0.00)
[2025-06-05 20:17:29] 2025-06-05 18:11:18,377 | INFO     | ..............................
[2025-06-05 20:17:29] 2025-06-05 18:11:18,377 | INFO     | . Timing measurements:
[2025-06-05 20:17:29] 2025-06-05 18:11:18,377 | INFO     | . get job = 0 s
[2025-06-05 20:17:29] 2025-06-05 18:11:18,377 | INFO     | . initial setup = 10 s
[2025-06-05 20:17:29] 2025-06-05 18:11:18,378 | INFO     | . payload setup = 164 s
[2025-06-05 20:17:29] 2025-06-05 18:11:18,378 | INFO     | . stage-in = 0 s
[2025-06-05 20:17:29] 2025-06-05 18:11:18,378 | INFO     | . payload execution = 19268 s
[2025-06-05 20:17:29] 2025-06-05 18:11:18,378 | INFO     | . stage-out = 3 s
[2025-06-05 20:17:29] 2025-06-05 18:11:18,378 | INFO     | . log creation = 1 s
[2025-06-05 20:17:29] 2025-06-05 18:11:18,378 | INFO     | ..............................
[2025-06-05 20:17:29] 2025-06-05 18:11:18,582 | INFO     | 
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | job summary report
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | --------------------------------------------------
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | PanDA job id: 6667435301
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | task id: 44871837
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | errors: (none)
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | pilot state: finished 
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | transexitcode: 0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | exeerrorcode: 0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | exeerrordiag: 
[2025-06-05 20:17:29] 2025-06-05 18:11:18,583 | INFO     | exitcode: 0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | exitmsg: OK
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | cpuconsumptiontime: 72097 s
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | nevents: 400
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | neventsw: 0
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | pid: 3818
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | pgrp: 3818
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | corecount: 8
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | event service: False
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | sizes: {0: 2397165, 1: 2397193, 2: 2397364, 12: 2397392, 23: 2397420, 34: 2397448, 45: 2397604, 55: 2397632, 66: 2397660, 77: 2397688, 87: 2397744, 93: 2398258, 98
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | --------------------------------------------------
[2025-06-05 20:17:29] 2025-06-05 18:11:18,584 | INFO     | 
[2025-06-05 20:17:29] 2025-06-05 18:11:18,585 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-05 20:17:29] 2025-06-05 18:11:18,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:17:29] 2025-06-05 18:11:18,891 | INFO     | job 6667435301 has completed (purged errors)
[2025-06-05 20:17:29] 2025-06-05 18:11:18,892 | INFO     | overall cleanup function is called
[2025-06-05 20:17:29] 2025-06-05 18:11:19,900 | INFO     | --- collectZombieJob: --- 10, [3818]
[2025-06-05 20:17:29] 2025-06-05 18:11:19,901 | INFO     | zombie collector waiting for pid 3818
[2025-06-05 20:17:29] 2025-06-05 18:11:19,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:17:29] 2025-06-05 18:11:19,901 | INFO     | collected zombie processes
[2025-06-05 20:17:29] 2025-06-05 18:11:19,901 | INFO     | will attempt to kill all subprocesses of pid=3818
[2025-06-05 20:17:29] 2025-06-05 18:11:20,026 | INFO     | process IDs to be killed: [3818] (in reverse order)
[2025-06-05 20:17:29] 2025-06-05 18:11:20,582 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:17:29] 2025-06-05 18:11:20,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:17:29] 2025-06-05 18:11:20,586 | INFO     | did not find any defunct processes belonging to 3818
[2025-06-05 20:17:29] 2025-06-05 18:11:20,590 | INFO     | did not find any defunct processes belonging to 3818
[2025-06-05 20:17:29] 2025-06-05 18:11:20,591 | INFO     | ready for new job
[2025-06-05 20:17:29] 2025-06-05 18:11:20,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:17:29] 2025-06-05 18:11:20,593 | INFO     | **************************************
[2025-06-05 20:17:29] 2025-06-05 18:11:20,594 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:17:29] 2025-06-05 18:11:20,594 | INFO     | **************************************
[2025-06-05 20:17:29] 2025-06-05 18:11:20,594 | INFO     | 
[2025-06-05 20:17:29] 2025-06-05 18:11:20,595 | INFO     | pilot is running in a VM
[2025-06-05 20:17:29] 2025-06-05 18:11:20,595 | INFO     | architecture information:
[2025-06-05 20:17:29] 2025-06-05 18:11:20,600 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:17:29] 2025-06-05 18:11:20,913 | INFO     | cat /etc/os-release:
[2025-06-05 20:17:29] NAME="CentOS Linux"
[2025-06-05 20:17:29] VERSION="7 (Core)"
[2025-06-05 20:17:29] ID="centos"
[2025-06-05 20:17:29] ID_LIKE="rhel fedora"
[2025-06-05 20:17:29] VERSION_ID="7"
[2025-06-05 20:17:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:17:29] ANSI_COLOR="0;31"
[2025-06-05 20:17:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:17:29] HOME_URL="https://www.centos.org/"
[2025-06-05 20:17:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:17:29] 
[2025-06-05 20:17:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:17:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:17:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:17:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:17:29] 
[2025-06-05 20:17:29] 2025-06-05 18:11:20,913 | INFO     | **************************************
[2025-06-05 20:17:29] 2025-06-05 18:11:21,418 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-05 20:17:29] 2025-06-05 18:11:21,587 | INFO     | sufficient remaining disk space (496384344064 B)
[2025-06-05 20:17:29] 2025-06-05 18:11:21,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:17:29] 2025-06-05 18:11:21,588 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:17:29] 2025-06-05 18:11:21,588 | INFO     | update_server=False
[2025-06-05 20:17:29] 2025-06-05 18:11:21,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:17:29] 2025-06-05 18:11:21,588 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 20:17:29] 2025-06-05 18:11:21,588 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:17:29] 2025-06-05 18:11:21,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:17:29] 2025-06-05 18:11:21,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:17:29] 2025-06-05 18:11:21,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:17:29] 2025-06-05 18:11:21,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:17:29] 2025-06-05 18:11:21,918 | INFO     | aborting loop
[2025-06-05 20:17:29] 2025-06-05 18:11:22,570 | INFO     | all data control threads have been joined
[2025-06-05 20:17:29] 2025-06-05 18:11:22,594 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:22,738 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:22,744 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:22,893 | INFO     | [job] validate thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:22,924 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:22,953 | INFO     | all payload control threads have been joined
[2025-06-05 20:17:29] 2025-06-05 18:11:23,067 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:23,068 | INFO     | all job control threads have been joined
[2025-06-05 20:17:29] 2025-06-05 18:11:23,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:17:29] 2025-06-05 18:11:23,501 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:23,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:17:29] 2025-06-05 18:11:23,521 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:23,576 | INFO     | [data] control thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:23,599 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:23,742 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:23,959 | INFO     | [payload] control thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:24,074 | INFO     | [job] control thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:24,526 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:27,335 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:31,702 | INFO     | job.realtimelogging is not enabled
[2025-06-05 20:17:29] 2025-06-05 18:11:32,708 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:17:29] 2025-06-05 18:11:33,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920498358080)>', '<ExcThread(monitor, started 139919691343616)>']
[2025-06-05 20:17:29] 2025-06-05 18:11:33,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:17:29] 2025-06-05 18:11:33,660 | INFO     | [monitor] control thread has ended
[2025-06-05 20:17:29] 2025-06-05 18:11:38,477 | INFO     | all workflow threads have been joined
[2025-06-05 20:17:29] 2025-06-05 18:11:38,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:17:29] 2025-06-05 18:11:38,478 | INFO     | traces error code: 0
[2025-06-05 20:17:29] 2025-06-05 18:11:38,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:17:29] 2025-06-05 18:11:38,885 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:17:29] 2025-06-05 18:11:39,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:17:29] 2025-06-05 18:11:39,075 [wrapper] pilotpid: 27622
[2025-06-05 20:17:29] 2025-06-05 18:11:39,177 [wrapper] Pilot exit status: 0
[2025-06-05 20:17:29] 2025-06-05 18:11:39,602 [wrapper] pandaids: 6667435301
[2025-06-05 20:17:29] 2025-06-05 18:11:40,303 [wrapper] cleanup supervisor_pilot 32538 27623
[2025-06-05 20:17:29] 2025-06-05 18:11:40,400 [wrapper] Test setup, not cleaning
[2025-06-05 20:17:29] 2025-06-05 18:11:40,494 [wrapper] apfmon messages muted
[2025-06-05 20:17:29] 2025-06-05 18:11:40,608 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:17:29] 2025-06-05 18:11:40,716 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:17:29]  *** Error codes and diagnostics ***
[2025-06-05 20:17:29]     "exeErrorCode": 0,
[2025-06-05 20:17:29]     "exeErrorDiag": "",
[2025-06-05 20:17:29]     "pilotErrorCode": 0,
[2025-06-05 20:17:29]     "pilotErrorDiag": "",
[2025-06-05 20:17:29]  *** Listing of results directory ***
[2025-06-05 20:17:29] total 418488
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc    495897 May 27 20:37 pilot3.tar.gz
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc      5111 May 27 21:22 queuedata.json
[2025-06-05 20:17:29] -rwx------. 1 boinc boinc     37140 May 27 21:24 runpilot2-wrapper.sh
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc       100 Jun  5 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:17:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 14:39 run_atlas
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc       105 Jun  5 14:39 job.xml
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc      6392 Jun  5 14:39 init_data.xml
[2025-06-05 20:17:29] -rw-r--r--. 2 boinc boinc 223137145 Jun  5 14:39 EVNT.44871834._002837.pool.root.1
[2025-06-05 20:17:29] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:39 start_atlas.sh
[2025-06-05 20:17:29] drwxrwx--x. 2 boinc boinc        68 Jun  5 14:39 shared
[2025-06-05 20:17:29] -rw-r--r--. 2 boinc boinc    508879 Jun  5 14:39 input.tar.gz
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc         0 Jun  5 14:39 boinc_lockfile
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc      2555 Jun  5 14:39 pandaJob.out
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc    983210 Jun  5 14:42 agis_schedconf.cvmfs.json
[2025-06-05 20:17:29] drwx------. 4 boinc boinc      4096 Jun  5 14:42 pilot3
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc 197398595 Jun  5 20:08 HITS.44871837._072258.pool.root.1
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc       531 Jun  5 20:08 boinc_task_state.xml
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc      1017 Jun  5 20:09 memory_monitor_summary.json
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc   1598969 Jun  5 20:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc    419412 Jun  5 20:09 log.44871837._072258.job.log.tgz.1
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc        95 Jun  5 20:10 pilot_heartbeat.json
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc      7689 Jun  5 20:11 heartbeat.json
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc      4612 Jun  5 20:11 pilotlog.txt
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc   1670410 Jun  5 20:11 log.44871837._072258.job.log.1
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc       357 Jun  5 20:11 output.list
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc       620 Jun  5 20:11 runtime_log
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc   2109440 Jun  5 20:11 result.tar.gz
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc      8673 Jun  5 20:11 runtime_log.err
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc       657 Jun  5 20:11 HS2LDmq5Ee7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKCaKDmarIRPm.diag
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc      8192 Jun  5 20:17 boinc_mmap_file
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc        28 Jun  5 20:17 wrapper_checkpoint.txt
[2025-06-05 20:17:29] -rw-r--r--. 1 boinc boinc     20516 Jun  5 20:17 stderr.txt
[2025-06-05 20:17:29] HITS file was successfully produced:
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc 197398595 Jun  5 20:08 shared/HITS.pool.root.1
[2025-06-05 20:17:29]  *** Contents of shared directory: ***
[2025-06-05 20:17:29] total 413260
[2025-06-05 20:17:29] -rw-r--r--. 2 boinc boinc 223137145 Jun  5 14:39 ATLAS.root_0
[2025-06-05 20:17:29] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:39 start_atlas.sh
[2025-06-05 20:17:29] -rw-r--r--. 2 boinc boinc    508879 Jun  5 14:39 input.tar.gz
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc 197398595 Jun  5 20:08 HITS.pool.root.1
[2025-06-05 20:17:29] -rw-------. 1 boinc boinc   2109440 Jun  5 20:11 result.tar.gz
20:17:31 (19668): run_atlas exited; CPU time 72358.109472
20:17:31 (19668): called boinc_finish(0)

</stderr_txt>
]]>

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