Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:21:32 (1725777): wrapper (7.7.26015): starting
21:21:32 (1725777): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 21:21:32] Arguments: --nthreads 8
[2025-06-04 21:21:32] Threads: 8
[2025-06-04 21:21:32] Checking for CVMFS
[2025-06-04 21:21:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:21:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:21:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:21:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:21:33] 2.12.6.0 65732 502 91668 146800 2 289 31930233 40960001 35791 16776704 0 3800961 99.911 1288772 39052 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 21:21:33] CVMFS is ok
[2025-06-04 21:21:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:21:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:21:33] Further information can be found at the LHC@home message board.
[2025-06-04 21:21:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:21:33] Checking for apptainer binary...
[2025-06-04 21:21:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:21:33] Running /usr/bin/apptainer --version
[2025-06-04 21:21:33] apptainer version 1.4.1-1.el9
[2025-06-04 21:21:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:21:33] c8-16-2.aglt2.org
[2025-06-04 21:21:33] apptainer works
[2025-06-04 21:21:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 21:21:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 21:21:33] Starting ATLAS job with PandaID=6668235194
[2025-06-04 21:21:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:40:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:40:14]  is_altstaged=None
[2025-06-04 22:40:14]  is_tar=False
[2025-06-04 22:40:14]  lfn=log.44871837._081926.job.log.tgz.1
[2025-06-04 22:40:14]  mtime=0
[2025-06-04 22:40:14]  protocol_id=None
[2025-06-04 22:40:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 22:40:14]  replicas=None
[2025-06-04 22:40:14]  scope=mc23_13p6TeV
[2025-06-04 22:40:14]  status=None
[2025-06-04 22:40:14]  status_code=0
[2025-06-04 22:40:14]  storage_token=
[2025-06-04 22:40:14]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6668235194/log.44871837._081926.job.log.tgz.1
[2025-06-04 22:40:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/b1/log.44871837._081926.job.log.tgz.1
[2025-06-04 22:40:14]  workdir=None
[2025-06-04 22:40:14] ]
[2025-06-04 22:40:14] 2025-06-05 02:39:57,203 | INFO     | transferring file log.44871837._081926.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668235194/log.44871837._081926.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 22:40:14] 2025-06-05 02:39:57,203 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668235194/log.44871837._081926.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._081926.job
[2025-06-04 22:40:14] 2025-06-05 02:39:57,224 | INFO     | adding to output.list: log.44871837._081926.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/b1/log.44871837._081926.job.log.tg
[2025-06-04 22:40:14] 2025-06-05 02:39:57,225 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 22:40:14] 2025-06-05 02:39:57,225 | INFO     | summary of transferred files:
[2025-06-04 22:40:14] 2025-06-05 02:39:57,225 | INFO     |  -- lfn=log.44871837._081926.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 22:40:14] 2025-06-05 02:39:57,225 | INFO     | stage-out finished correctly
[2025-06-04 22:40:14] 2025-06-05 02:39:58,336 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 22:40:14] 2025-06-05 02:39:58,396 | INFO     | job 6668235194 has state=finished
[2025-06-04 22:40:14] 2025-06-05 02:39:58,396 | INFO     | preparing for final server update for job 6668235194 in state='finished'
[2025-06-04 22:40:14] 2025-06-05 02:39:58,397 | INFO     | this job has now completed (state=finished)
[2025-06-04 22:40:14] 2025-06-05 02:39:58,397 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 22:40:14] 2025-06-05 02:39:58,397 | INFO     | log transfer has been attempted: DONE
[2025-06-04 22:40:14] 2025-06-05 02:39:58,397 | INFO     | job 6668235194 has finished - writing final server update
[2025-06-04 22:40:14] 2025-06-05 02:39:58,397 | INFO     | total number of processed events: 400 (read)
[2025-06-04 22:40:14] 2025-06-05 02:39:58,415 | INFO     | executing command: lscpu
[2025-06-04 22:40:14] 2025-06-05 02:39:58,488 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 22:40:14] 2025-06-05 02:40:00,466 | INFO     | PID=1734954 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 22:40:14] 2025-06-05 02:40:00,466 | INFO     | .. there are 38 such processes running
[2025-06-04 22:40:14] 2025-06-05 02:40:02,319 | WARNING  | process 1760609 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 22:40:14] 2025-06-05 02:40:02,319 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668235194/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:40:14] 2025-06-05 02:40:02,678 | INFO     | number of running child processes to parent process 1760609: 1
[2025-06-04 22:40:14] 2025-06-05 02:40:02,678 | INFO     | maximum number of monitored processes: 6
[2025-06-04 22:40:14] 2025-06-05 02:40:02,892 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 22:40:14] 2025-06-05 02:40:02,893 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668235194/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:40:14] 2025-06-05 02:40:02,893 | INFO     | extracted standard info from prmon json
[2025-06-04 22:40:14] 2025-06-05 02:40:02,893 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:40:14] 2025-06-05 02:40:02,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:40:14] 2025-06-05 02:40:02,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:40:14] 2025-06-05 02:40:02,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:40:14] 2025-06-05 02:40:02,895 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:40:14] 2025-06-05 02:40:02,895 | INFO     | sum of square deviations: 106336877.5
[2025-06-04 22:40:14] 2025-06-05 02:40:02,895 | INFO     | sum of deviations: -6262602301.500001
[2025-06-04 22:40:14] 2025-06-05 02:40:02,895 | INFO     | mean x: 1749088947.5
[2025-06-04 22:40:14] 2025-06-05 02:40:02,895 | INFO     | mean y: 2549183.2714285715
[2025-06-04 22:40:14] 2025-06-05 02:40:02,895 | INFO     | -- intersect: 103013364675.2132
[2025-06-04 22:40:14] 2025-06-05 02:40:02,896 | INFO     | intersect: 103013364675.2132
[2025-06-04 22:40:14] 2025-06-05 02:40:02,896 | INFO     | chi2: 0.03705948887155196
[2025-06-04 22:40:14] 2025-06-05 02:40:02,896 | INFO     | -- intersect: 103013364675.2132
[2025-06-04 22:40:14] 2025-06-05 02:40:02,896 | INFO     | current memory leak: -58.89 B/s (using 70 data points, chi2=0.04)
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | ..............................
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | . Timing measurements:
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | . get job = 0 s
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | . initial setup = 2 s
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | . payload setup = 9 s
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | . stage-in = 0 s
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | . payload execution = 4661 s
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | . stage-out = 0 s
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | . log creation = 0 s
[2025-06-04 22:40:14] 2025-06-05 02:40:02,897 | INFO     | ..............................
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | 
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | job summary report
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | --------------------------------------------------
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | PanDA job id: 6668235194
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | task id: 44871837
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | errors: (none)
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | pilot state: finished 
[2025-06-04 22:40:14] 2025-06-05 02:40:02,956 | INFO     | transexitcode: 0
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | exeerrorcode: 0
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | exeerrordiag: 
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | exitcode: 0
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | exitmsg: OK
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | cpuconsumptiontime: 28914 s
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | nevents: 400
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | neventsw: 0
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | pid: 1760609
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | pgrp: 1760609
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | corecount: 8
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | event service: False
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | sizes: {0: 2397392, 6: 2397598, 11: 2397626, 4674: 2423691, 4675: 2432632, 4676: 2432688, 4681: 2432986}
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | --------------------------------------------------
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | 
[2025-06-04 22:40:14] 2025-06-05 02:40:02,957 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | job 6668235194 has completed (purged errors)
[2025-06-04 22:40:14] 2025-06-05 02:40:02,983 | INFO     | overall cleanup function is called
[2025-06-04 22:40:14] 2025-06-05 02:40:03,999 | INFO     | --- collectZombieJob: --- 10, [1760609]
[2025-06-04 22:40:14] 2025-06-05 02:40:03,999 | INFO     | zombie collector waiting for pid 1760609
[2025-06-04 22:40:14] 2025-06-05 02:40:03,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:40:14] 2025-06-05 02:40:04,000 | INFO     | collected zombie processes
[2025-06-04 22:40:14] 2025-06-05 02:40:04,000 | INFO     | will attempt to kill all subprocesses of pid=1760609
[2025-06-04 22:40:14] 2025-06-05 02:40:04,386 | INFO     | process IDs to be killed: [1760609] (in reverse order)
[2025-06-04 22:40:14] 2025-06-05 02:40:04,536 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:40:14] 2025-06-05 02:40:04,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:40:14] 2025-06-05 02:40:04,559 | INFO     | did not find any defunct processes belonging to 1760609
[2025-06-04 22:40:14] 2025-06-05 02:40:04,582 | INFO     | did not find any defunct processes belonging to 1760609
[2025-06-04 22:40:14] 2025-06-05 02:40:04,582 | INFO     | ready for new job
[2025-06-04 22:40:14] 2025-06-05 02:40:04,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:40:14] 2025-06-05 02:40:04,583 | INFO     | **************************************
[2025-06-04 22:40:14] 2025-06-05 02:40:04,584 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:40:14] 2025-06-05 02:40:04,584 | INFO     | **************************************
[2025-06-04 22:40:14] 2025-06-05 02:40:04,584 | INFO     | 
[2025-06-04 22:40:14] 2025-06-05 02:40:04,602 | INFO     | architecture information:
[2025-06-04 22:40:14] 2025-06-05 02:40:04,602 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:40:14] 2025-06-05 02:40:04,617 | INFO     | cat /etc/os-release:
[2025-06-04 22:40:14] NAME="CentOS Linux"
[2025-06-04 22:40:14] VERSION="7 (Core)"
[2025-06-04 22:40:14] ID="centos"
[2025-06-04 22:40:14] ID_LIKE="rhel fedora"
[2025-06-04 22:40:14] VERSION_ID="7"
[2025-06-04 22:40:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:40:14] ANSI_COLOR="0;31"
[2025-06-04 22:40:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:40:14] HOME_URL="https://www.centos.org/"
[2025-06-04 22:40:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:40:14] 
[2025-06-04 22:40:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:40:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:40:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:40:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:40:14] 
[2025-06-04 22:40:14] 2025-06-05 02:40:04,618 | INFO     | **************************************
[2025-06-04 22:40:14] 2025-06-05 02:40:05,120 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 22:40:14] 2025-06-05 02:40:05,138 | INFO     | sufficient remaining disk space (173721780224 B)
[2025-06-04 22:40:14] 2025-06-05 02:40:05,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:40:14] 2025-06-05 02:40:05,140 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:40:14] 2025-06-05 02:40:05,140 | INFO     | update_server=False
[2025-06-04 22:40:14] 2025-06-05 02:40:05,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:40:14] 2025-06-05 02:40:05,141 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 22:40:14] 2025-06-05 02:40:05,141 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:40:14] 2025-06-05 02:40:05,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:40:14] 2025-06-05 02:40:05,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:40:14] 2025-06-05 02:40:05,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:40:14] 2025-06-05 02:40:05,181 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 22:40:14] 2025-06-05 02:40:05,181 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 22:40:14] 2025-06-05 02:40:05,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:40:14] 2025-06-05 02:40:05,182 | INFO     | will abort loop
[2025-06-04 22:40:14] 2025-06-05 02:40:05,268 | INFO     | all data control threads have been joined
[2025-06-04 22:40:14] 2025-06-05 02:40:05,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:40:14] 2025-06-05 02:40:05,677 | INFO     | all payload control threads have been joined
[2025-06-04 22:40:14] 2025-06-05 02:40:06,146 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,187 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,187 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,262 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,273 | INFO     | [data] control thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,349 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,447 | INFO     | [job] validate thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,581 | INFO     | all job control threads have been joined
[2025-06-04 22:40:14] 2025-06-05 02:40:06,677 | INFO     | [payload] control thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:06,928 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:07,091 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:07,299 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:07,585 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:07,588 | INFO     | [job] control thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:07,968 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:40:14] 2025-06-05 02:40:08,974 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:09,148 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:40:14] 2025-06-05 02:40:09,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192723068736)>', '<ExcThread(monitor, started 140192094615296)>']
[2025-06-04 22:40:14] 2025-06-05 02:40:10,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:40:14] 2025-06-05 02:40:10,170 | INFO     | [monitor] control thread has ended
[2025-06-04 22:40:14] 2025-06-05 02:40:14,319 | INFO     | all workflow threads have been joined
[2025-06-04 22:40:14] 2025-06-05 02:40:14,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:40:14] 2025-06-05 02:40:14,320 | INFO     | traces error code: 0
[2025-06-04 22:40:14] 2025-06-05 02:40:14,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:40:14] 2025-06-05 02:40:14,444 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:40:14] 2025-06-05 02:40:14,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:40:14] 2025-06-05 02:40:14,451 [wrapper] pilotpid: 1734954
[2025-06-04 22:40:14] 2025-06-05 02:40:14,454 [wrapper] Pilot exit status: 0
[2025-06-04 22:40:14] 2025-06-05 02:40:14,474 [wrapper] pandaids: 6668235194
[2025-06-04 22:40:14] 2025-06-05 02:40:14,586 [wrapper] cleanup supervisor_pilot 3069238 1734955
[2025-06-04 22:40:14] 2025-06-05 02:40:14,589 [wrapper] Test setup, not cleaning
[2025-06-04 22:40:14] 2025-06-05 02:40:14,592 [wrapper] apfmon messages muted
[2025-06-04 22:40:14] 2025-06-05 02:40:14,595 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:40:14] 2025-06-05 02:40:14,599 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:40:14]  *** Error codes and diagnostics ***
[2025-06-04 22:40:14]     "exeErrorCode": 0,
[2025-06-04 22:40:14]     "exeErrorDiag": "",
[2025-06-04 22:40:14]     "pilotErrorCode": 0,
[2025-06-04 22:40:14]     "pilotErrorDiag": "",
[2025-06-04 22:40:14]  *** Listing of results directory ***
[2025-06-04 22:40:14] total 422172
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas    495897 May 28 04:16 pilot3.tar.gz
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas      5111 May 28 04:58 queuedata.json
[2025-06-04 22:40:14] -rwx------. 1 boincer umatlas     37140 May 28 05:00 runpilot2-wrapper.sh
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas       100 Jun  4 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:40:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 21:21 run_atlas
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas       105 Jun  4 21:21 job.xml
[2025-06-04 22:40:14] -rw-r--r--. 2 boincer umatlas 227345553 Jun  4 21:21 EVNT.44871834._003199.pool.root.1
[2025-06-04 22:40:14] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 21:21 input.tar.gz
[2025-06-04 22:40:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:21 start_atlas.sh
[2025-06-04 22:40:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 21:21 shared
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas         0 Jun  4 21:21 boinc_lockfile
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 21:21 pandaJob.out
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas    987109 Jun  4 21:21 agis_schedconf.cvmfs.json
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas   1598969 Jun  4 21:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:40:14] drwx------. 4 boincer umatlas      4096 Jun  4 21:21 pilot3
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas      7158 Jun  4 22:31 init_data.xml
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas        95 Jun  4 22:39 pilot_heartbeat.json
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas 199613756 Jun  4 22:39 HITS.44871837._081926.pool.root.1
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas       529 Jun  4 22:39 boinc_task_state.xml
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas      1044 Jun  4 22:39 memory_monitor_summary.json
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas    314780 Jun  4 22:39 log.44871837._081926.job.log.tgz.1
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas      7716 Jun  4 22:40 heartbeat.json
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 22:40 boinc_mmap_file
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas        27 Jun  4 22:40 wrapper_checkpoint.txt
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas      4663 Jun  4 22:40 pilotlog.txt
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas    440528 Jun  4 22:40 log.44871837._081926.job.log.1
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas       357 Jun  4 22:40 output.list
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas       620 Jun  4 22:40 runtime_log
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas    778240 Jun  4 22:40 result.tar.gz
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas       655 Jun  4 22:40 vE9NDmlpRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUkbKDmODVaKm.diag
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 22:40 runtime_log.err
[2025-06-04 22:40:14] -rw-r--r--. 1 boincer umatlas     21489 Jun  4 22:40 stderr.txt
[2025-06-04 22:40:14] HITS file was successfully produced:
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas 199613756 Jun  4 22:39 shared/HITS.pool.root.1
[2025-06-04 22:40:14]  *** Contents of shared directory: ***
[2025-06-04 22:40:14] total 418240
[2025-06-04 22:40:14] -rw-r--r--. 2 boincer umatlas 227345553 Jun  4 21:21 ATLAS.root_0
[2025-06-04 22:40:14] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 21:21 input.tar.gz
[2025-06-04 22:40:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:21 start_atlas.sh
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas 199613756 Jun  4 22:39 HITS.pool.root.1
[2025-06-04 22:40:14] -rw-------. 1 boincer umatlas    778240 Jun  4 22:40 result.tar.gz
22:40:16 (1725777): run_atlas exited; CPU time 28974.132595
22:40:16 (1725777): called boinc_finish(0)

</stderr_txt>
]]>

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