Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:21:26 (2296282): wrapper (7.7.26015): starting
21:21:26 (2296282): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 21:21:26] Arguments: --nthreads 12
[2025-06-04 21:21:26] Threads: 12
[2025-06-04 21:21:26] Checking for CVMFS
[2025-06-04 21:21:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:21:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:21:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:21:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:21:27] 2.12.6.0 34032 32212 418096 146800 0 20 28478750 29414400 6455 16776704 0 97353081 99.561 106404273 32193 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 21:21:27] CVMFS is ok
[2025-06-04 21:21:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:21:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:21:27] Further information can be found at the LHC@home message board.
[2025-06-04 21:21:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:21:27] Checking for apptainer binary...
[2025-06-04 21:21:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:21:27] Running /usr/bin/apptainer --version
[2025-06-04 21:21:27] apptainer version 1.4.1-1.el9
[2025-06-04 21:21:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:21:27] c6-5-37-4.aglt2.org
[2025-06-04 21:21:27] apptainer works
[2025-06-04 21:21:27] Set ATHENA_PROC_NUMBER=12
[2025-06-04 21:21:27] Set ATHENA_CORE_NUMBER=12
[2025-06-04 21:21:27] Starting ATLAS job with PandaID=6668046441
[2025-06-04 21:21:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:19:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:19:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 22:19:06]  is_altstaged=None
[2025-06-04 22:19:06]  is_tar=False
[2025-06-04 22:19:06]  lfn=log.44871837._079099.job.log.tgz.1
[2025-06-04 22:19:06]  mtime=0
[2025-06-04 22:19:06]  protocol_id=None
[2025-06-04 22:19:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 22:19:06]  replicas=None
[2025-06-04 22:19:06]  scope=mc23_13p6TeV
[2025-06-04 22:19:06]  status=None
[2025-06-04 22:19:06]  status_code=0
[2025-06-04 22:19:06]  storage_token=
[2025-06-04 22:19:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668046441/log.44871837._079099.job.log.tgz.1
[2025-06-04 22:19:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/08/fe/log.44871837._079099.job.log.tgz.1
[2025-06-04 22:19:06]  workdir=None
[2025-06-04 22:19:06] ]
[2025-06-04 22:19:06] 2025-06-05 02:18:38,433 | INFO     | transferring file log.44871837._079099.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668046441/log.44871837._079099.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 22:19:06] 2025-06-05 02:18:38,433 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668046441/log.44871837._079099.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._079099.job
[2025-06-04 22:19:06] 2025-06-05 02:18:38,449 | INFO     | adding to output.list: log.44871837._079099.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/08/fe/log.44871837._079099.job.log.tg
[2025-06-04 22:19:06] 2025-06-05 02:18:38,450 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 22:19:06] 2025-06-05 02:18:38,450 | INFO     | summary of transferred files:
[2025-06-04 22:19:06] 2025-06-05 02:18:38,451 | INFO     |  -- lfn=log.44871837._079099.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 22:19:06] 2025-06-05 02:18:38,451 | INFO     | stage-out finished correctly
[2025-06-04 22:19:06] 2025-06-05 02:18:39,433 | INFO     | monitor loop #259: job 0:6668046441 is in state 'finished'
[2025-06-04 22:19:06] 2025-06-05 02:18:39,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:19:06] 2025-06-05 02:18:40,051 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 22:19:06] 2025-06-05 02:18:41,937 | INFO     | monitor loop #260: job 0:6668046441 is in state 'finished'
[2025-06-04 22:19:06] 2025-06-05 02:18:41,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:19:06] 2025-06-05 02:18:42,675 | INFO     | job 6668046441 has state=finished
[2025-06-04 22:19:06] 2025-06-05 02:18:42,675 | INFO     | preparing for final server update for job 6668046441 in state='finished'
[2025-06-04 22:19:06] 2025-06-05 02:18:42,676 | INFO     | this job has now completed (state=finished)
[2025-06-04 22:19:06] 2025-06-05 02:18:42,676 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 22:19:06] 2025-06-05 02:18:42,676 | INFO     | log transfer has been attempted: DONE
[2025-06-04 22:19:06] 2025-06-05 02:18:42,676 | INFO     | job 6668046441 has finished - writing final server update
[2025-06-04 22:19:06] 2025-06-05 02:18:42,677 | INFO     | total number of processed events: 400 (read)
[2025-06-04 22:19:06] 2025-06-05 02:18:42,693 | INFO     | executing command: lscpu
[2025-06-04 22:19:06] 2025-06-05 02:18:42,757 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 22:19:06] 2025-06-05 02:18:44,441 | INFO     | monitor loop #261: job 0:6668046441 is in state 'finished'
[2025-06-04 22:19:06] 2025-06-05 02:18:44,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 22:19:06] 2025-06-05 02:18:46,601 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 22:19:06] 2025-06-05 02:18:46,602 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668046441/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:19:06] 2025-06-05 02:18:46,603 | INFO     | extracted standard info from prmon json
[2025-06-04 22:19:06] 2025-06-05 02:18:46,603 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:19:06] 2025-06-05 02:18:46,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:19:06] 2025-06-05 02:18:46,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:19:06] 2025-06-05 02:18:46,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:19:06] 2025-06-05 02:18:46,606 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:19:06] 2025-06-05 02:18:46,606 | INFO     | sum of square deviations: 36465800.0
[2025-06-04 22:19:06] 2025-06-05 02:18:46,606 | INFO     | sum of deviations: -2790579627.0
[2025-06-04 22:19:06] 2025-06-05 02:18:46,606 | INFO     | mean x: 1749088288.0
[2025-06-04 22:19:06] 2025-06-05 02:18:46,606 | INFO     | mean y: 2780597.285714286
[2025-06-04 22:19:06] 2025-06-05 02:18:46,606 | INFO     | -- intersect: 133853406178.43597
[2025-06-04 22:19:06] 2025-06-05 02:18:46,606 | INFO     | intersect: 133853406178.43597
[2025-06-04 22:19:06] 2025-06-05 02:18:46,606 | INFO     | chi2: 0.1085482768253252
[2025-06-04 22:19:06] 2025-06-05 02:18:46,607 | INFO     | -- intersect: 133853406178.43597
[2025-06-04 22:19:06] 2025-06-05 02:18:46,607 | INFO     | current memory leak: -76.53 B/s (using 49 data points, chi2=0.11)
[2025-06-04 22:19:06] 2025-06-05 02:18:46,607 | INFO     | ..............................
[2025-06-04 22:19:06] 2025-06-05 02:18:46,607 | INFO     | . Timing measurements:
[2025-06-04 22:19:06] 2025-06-05 02:18:46,607 | INFO     | . get job = 0 s
[2025-06-04 22:19:06] 2025-06-05 02:18:46,607 | INFO     | . initial setup = 2 s
[2025-06-04 22:19:06] 2025-06-05 02:18:46,607 | INFO     | . payload setup = 5 s
[2025-06-04 22:19:06] 2025-06-05 02:18:46,608 | INFO     | . stage-in = 0 s
[2025-06-04 22:19:06] 2025-06-05 02:18:46,608 | INFO     | . payload execution = 3398 s
[2025-06-04 22:19:06] 2025-06-05 02:18:46,608 | INFO     | . stage-out = 0 s
[2025-06-04 22:19:06] 2025-06-05 02:18:46,608 | INFO     | . log creation = 0 s
[2025-06-04 22:19:06] 2025-06-05 02:18:46,608 | INFO     | ..............................
[2025-06-04 22:19:06] 2025-06-05 02:18:46,694 | INFO     | 
[2025-06-04 22:19:06] 2025-06-05 02:18:46,694 | INFO     | job summary report
[2025-06-04 22:19:06] 2025-06-05 02:18:46,694 | INFO     | --------------------------------------------------
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | PanDA job id: 6668046441
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | task id: 44871837
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | errors: (none)
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | pilot state: finished 
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | transexitcode: 0
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | exeerrorcode: 0
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | exeerrordiag: 
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | exitcode: 0
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | exitmsg: OK
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | cpuconsumptiontime: 36910 s
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | nevents: 400
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | neventsw: 0
[2025-06-04 22:19:06] 2025-06-05 02:18:46,695 | INFO     | pid: 2306479
[2025-06-04 22:19:06] 2025-06-05 02:18:46,696 | INFO     | pgrp: 2306479
[2025-06-04 22:19:06] 2025-06-05 02:18:46,696 | INFO     | corecount: 12
[2025-06-04 22:19:06] 2025-06-05 02:18:46,696 | INFO     | event service: False
[2025-06-04 22:19:06] 2025-06-05 02:18:46,696 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 3407: 2423235, 3408: 2432176, 3410: 2432232, 3417: 2432530}
[2025-06-04 22:19:06] 2025-06-05 02:18:46,696 | INFO     | --------------------------------------------------
[2025-06-04 22:19:06] 2025-06-05 02:18:46,696 | INFO     | 
[2025-06-04 22:19:06] 2025-06-05 02:18:46,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 22:19:06] 2025-06-05 02:18:46,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:19:06] 2025-06-05 02:18:46,718 | INFO     | job 6668046441 has completed (purged errors)
[2025-06-04 22:19:06] 2025-06-05 02:18:46,719 | INFO     | overall cleanup function is called
[2025-06-04 22:19:06] 2025-06-05 02:18:47,726 | INFO     | --- collectZombieJob: --- 10, [2306479]
[2025-06-04 22:19:06] 2025-06-05 02:18:47,726 | INFO     | zombie collector waiting for pid 2306479
[2025-06-04 22:19:06] 2025-06-05 02:18:47,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:19:06] 2025-06-05 02:18:47,726 | INFO     | collected zombie processes
[2025-06-04 22:19:06] 2025-06-05 02:18:47,726 | INFO     | will attempt to kill all subprocesses of pid=2306479
[2025-06-04 22:19:06] 2025-06-05 02:18:47,947 | INFO     | process IDs to be killed: [2306479] (in reverse order)
[2025-06-04 22:19:06] 2025-06-05 02:18:48,024 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:19:06] 2025-06-05 02:18:48,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:19:06] 2025-06-05 02:18:48,036 | INFO     | did not find any defunct processes belonging to 2306479
[2025-06-04 22:19:06] 2025-06-05 02:18:48,048 | INFO     | did not find any defunct processes belonging to 2306479
[2025-06-04 22:19:06] 2025-06-05 02:18:48,048 | INFO     | ready for new job
[2025-06-04 22:19:06] 2025-06-05 02:18:48,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:19:06] 2025-06-05 02:18:48,050 | INFO     | **************************************
[2025-06-04 22:19:06] 2025-06-05 02:18:48,051 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:19:06] 2025-06-05 02:18:48,051 | INFO     | **************************************
[2025-06-04 22:19:06] 2025-06-05 02:18:48,051 | INFO     | 
[2025-06-04 22:19:06] 2025-06-05 02:18:48,067 | INFO     | architecture information:
[2025-06-04 22:19:06] 2025-06-05 02:18:48,067 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:19:06] 2025-06-05 02:18:48,084 | INFO     | cat /etc/os-release:
[2025-06-04 22:19:06] NAME="CentOS Linux"
[2025-06-04 22:19:06] VERSION="7 (Core)"
[2025-06-04 22:19:06] ID="centos"
[2025-06-04 22:19:06] ID_LIKE="rhel fedora"
[2025-06-04 22:19:06] VERSION_ID="7"
[2025-06-04 22:19:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:19:06] ANSI_COLOR="0;31"
[2025-06-04 22:19:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:19:06] HOME_URL="https://www.centos.org/"
[2025-06-04 22:19:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:19:06] 
[2025-06-04 22:19:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:19:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:19:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:19:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:19:06] 
[2025-06-04 22:19:06] 2025-06-05 02:18:48,084 | INFO     | **************************************
[2025-06-04 22:19:06] 2025-06-05 02:18:48,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 22:19:06] 2025-06-05 02:18:48,604 | INFO     | sufficient remaining disk space (75296145408 B)
[2025-06-04 22:19:06] 2025-06-05 02:18:48,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:19:06] 2025-06-05 02:18:48,605 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:19:06] 2025-06-05 02:18:48,605 | INFO     | update_server=False
[2025-06-04 22:19:06] 2025-06-05 02:18:48,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:19:06] 2025-06-05 02:18:48,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:19:06] 2025-06-05 02:18:48,606 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 22:19:06] 2025-06-05 02:18:48,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:19:06] 2025-06-05 02:18:48,606 | INFO     | aborting loop
[2025-06-04 22:19:06] 2025-06-05 02:18:48,607 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:19:06] 2025-06-05 02:18:48,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:19:06] 2025-06-05 02:18:48,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:19:06] 2025-06-05 02:18:49,005 | INFO     | all job control threads have been joined
[2025-06-04 22:19:06] 2025-06-05 02:18:49,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:19:06] 2025-06-05 02:18:49,378 | INFO     | all data control threads have been joined
[2025-06-04 22:19:06] 2025-06-05 02:18:49,397 | INFO     | all payload control threads have been joined
[2025-06-04 22:19:06] 2025-06-05 02:18:49,608 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:49,610 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:49,611 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:49,649 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:49,792 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:49,982 | INFO     | [job] validate thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:50,010 | INFO     | [job] control thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:50,012 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:50,307 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:50,381 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:50,384 | INFO     | [data] control thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:50,403 | INFO     | [payload] control thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:50,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:19:06] 2025-06-05 02:18:50,898 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:51,062 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:54,640 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:18:59,074 | INFO     | job.realtimelogging is not enabled
[2025-06-04 22:19:06] 2025-06-05 02:19:00,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:19:06] 2025-06-05 02:19:01,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644579936064)>', '<ExcThread(monitor, started 139643790018304)>']
[2025-06-04 22:19:06] 2025-06-05 02:19:01,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:19:06] 2025-06-05 02:19:01,668 | INFO     | [monitor] control thread has ended
[2025-06-04 22:19:06] 2025-06-05 02:19:06,261 | INFO     | all workflow threads have been joined
[2025-06-04 22:19:06] 2025-06-05 02:19:06,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:19:06] 2025-06-05 02:19:06,261 | INFO     | traces error code: 0
[2025-06-04 22:19:06] 2025-06-05 02:19:06,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:19:06] 2025-06-05 02:19:06,441 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:19:06] 2025-06-05 02:19:06,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:19:06] 2025-06-05 02:19:06,447 [wrapper] pilotpid: 2299941
[2025-06-04 22:19:06] 2025-06-05 02:19:06,449 [wrapper] Pilot exit status: 0
[2025-06-04 22:19:06] 2025-06-05 02:19:06,460 [wrapper] pandaids: 6668046441
[2025-06-04 22:19:06] 2025-06-05 02:19:06,501 [wrapper] cleanup supervisor_pilot 2392622 2299942
[2025-06-04 22:19:06] 2025-06-05 02:19:06,505 [wrapper] Test setup, not cleaning
[2025-06-04 22:19:06] 2025-06-05 02:19:06,507 [wrapper] apfmon messages muted
[2025-06-04 22:19:06] 2025-06-05 02:19:06,510 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:19:06] 2025-06-05 02:19:06,512 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:19:06]  *** Error codes and diagnostics ***
[2025-06-04 22:19:06]     "exeErrorCode": 0,
[2025-06-04 22:19:06]     "exeErrorDiag": "",
[2025-06-04 22:19:06]     "pilotErrorCode": 0,
[2025-06-04 22:19:06]     "pilotErrorDiag": "",
[2025-06-04 22:19:06]  *** Listing of results directory ***
[2025-06-04 22:19:06] total 410656
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas      5111 May 28 01:16 queuedata.json
[2025-06-04 22:19:06] -rwx------. 1 boincer umatlas     37140 May 28 01:19 runpilot2-wrapper.sh
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas       100 Jun  4 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:19:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 21:21 run_atlas
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas       105 Jun  4 21:21 job.xml
[2025-06-04 22:19:06] -rw-r--r--. 2 boincer umatlas 221959265 Jun  4 21:21 EVNT.44871834._003091.pool.root.1
[2025-06-04 22:19:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:21 start_atlas.sh
[2025-06-04 22:19:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 21:21 shared
[2025-06-04 22:19:06] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 21:21 input.tar.gz
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas         0 Jun  4 21:21 boinc_lockfile
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 21:21 pandaJob.out
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas    987109 Jun  4 21:21 agis_schedconf.cvmfs.json
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas   1598969 Jun  4 21:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:19:06] drwx------. 4 boincer umatlas      4096 Jun  4 21:21 pilot3
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 22:12 init_data.xml
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas       530 Jun  4 22:17 boinc_task_state.xml
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas 193279986 Jun  4 22:18 HITS.44871837._079099.pool.root.1
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas        95 Jun  4 22:18 pilot_heartbeat.json
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas      1035 Jun  4 22:18 memory_monitor_summary.json
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas    369786 Jun  4 22:18 log.44871837._079099.job.log.tgz.1
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas      7721 Jun  4 22:18 heartbeat.json
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 22:19 boinc_mmap_file
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas        27 Jun  4 22:19 wrapper_checkpoint.txt
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas      4548 Jun  4 22:19 pilotlog.txt
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas    353106 Jun  4 22:19 log.44871837._079099.job.log.1
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas       357 Jun  4 22:19 output.list
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas       620 Jun  4 22:19 runtime_log
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas    737280 Jun  4 22:19 result.tar.gz
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 22:19 runtime_log.err
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas       653 Jun  4 22:19 rU3KDm3MOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuJbKDmvU0Dfm.diag
[2025-06-04 22:19:06] -rw-r--r--. 1 boincer umatlas     21365 Jun  4 22:19 stderr.txt
[2025-06-04 22:19:06] HITS file was successfully produced:
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas 193279986 Jun  4 22:18 shared/HITS.pool.root.1
[2025-06-04 22:19:06]  *** Contents of shared directory: ***
[2025-06-04 22:19:06] total 406752
[2025-06-04 22:19:06] -rw-r--r--. 2 boincer umatlas 221959265 Jun  4 21:21 ATLAS.root_0
[2025-06-04 22:19:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:21 start_atlas.sh
[2025-06-04 22:19:06] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 21:21 input.tar.gz
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas 193279986 Jun  4 22:18 HITS.pool.root.1
[2025-06-04 22:19:06] -rw-------. 1 boincer umatlas    737280 Jun  4 22:19 result.tar.gz
22:19:08 (2296282): run_atlas exited; CPU time 36964.331706
22:19:08 (2296282): called boinc_finish(0)

</stderr_txt>
]]>

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