Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:21:23 (986846): wrapper (7.7.26015): starting
21:21:23 (986846): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 21:21:23] Arguments: --nthreads 10
[2025-06-04 21:21:23] Threads: 10
[2025-06-04 21:21:23] Checking for CVMFS
[2025-06-04 21:21:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:21:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:21:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:21:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:21:23] 2.12.6.0 709574 221531 324088 146800 0 212 28514912 32935936 18880 130560 1 373279083 99.640 361802998 26966 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 21:21:23] CVMFS is ok
[2025-06-04 21:21:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:21:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:21:23] Further information can be found at the LHC@home message board.
[2025-06-04 21:21:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:21:23] Checking for apptainer binary...
[2025-06-04 21:21:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:21:23] Running /usr/bin/apptainer --version
[2025-06-04 21:21:23] apptainer version 1.4.1-1.el9
[2025-06-04 21:21:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:21:23] c-5-6.aglt2.org
[2025-06-04 21:21:23] apptainer works
[2025-06-04 21:21:23] Set ATHENA_PROC_NUMBER=10
[2025-06-04 21:21:23] Set ATHENA_CORE_NUMBER=10
[2025-06-04 21:21:23] Starting ATLAS job with PandaID=6667883247
[2025-06-04 21:21:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:03:39]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:03:39] 2025-06-05 05:03:24,239 | INFO     | extracted standard info from prmon json
[2025-06-05 01:03:39] 2025-06-05 05:03:24,239 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:03:39] 2025-06-05 05:03:24,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:03:39] 2025-06-05 05:03:24,240 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:03:39] 2025-06-05 05:03:24,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:03:39] 2025-06-05 05:03:24,245 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:03:39] 2025-06-05 05:03:24,245 | INFO     | sum of square deviations: 3212617623.302754
[2025-06-05 01:03:39] 2025-06-05 05:03:24,247 | INFO     | sum of deviations: -57369044726.38533
[2025-06-05 01:03:39] 2025-06-05 05:03:24,247 | INFO     | mean x: 1749093144.853211
[2025-06-05 01:03:39] 2025-06-05 05:03:24,247 | INFO     | mean y: 2497313.0504587158
[2025-06-05 01:03:39] 2025-06-05 05:03:24,247 | INFO     | -- intersect: 31236778707.09283
[2025-06-05 01:03:39] 2025-06-05 05:03:24,248 | INFO     | intersect: 31236778707.09283
[2025-06-05 01:03:39] 2025-06-05 05:03:24,248 | INFO     | chi2: 2.590892776834383
[2025-06-05 01:03:39] 2025-06-05 05:03:24,248 | INFO     | sum of square deviations: 2996588226.291077
[2025-06-05 01:03:39] 2025-06-05 05:03:24,250 | INFO     | sum of deviations: -42232613248.77932
[2025-06-05 01:03:39] 2025-06-05 05:03:24,250 | INFO     | mean x: 1749092992.3474178
[2025-06-05 01:03:39] 2025-06-05 05:03:24,250 | INFO     | mean y: 2507823.0375586855
[2025-06-05 01:03:39] 2025-06-05 05:03:24,250 | INFO     | -- intersect: 24653464946.161255
[2025-06-05 01:03:39] 2025-06-05 05:03:24,251 | INFO     | intersect: 24653464946.161255
[2025-06-05 01:03:39] 2025-06-05 05:03:24,251 | INFO     | chi2: 1.9156372611892047
[2025-06-05 01:03:39] 2025-06-05 05:03:24,251 | INFO     | current chi2=1.9156372611892047 (change=26.062657694010095 %)
[2025-06-05 01:03:39] 2025-06-05 05:03:24,252 | INFO     | sum of square deviations: 2790452632.4422965
[2025-06-05 01:03:39] 2025-06-05 05:03:24,253 | INFO     | sum of deviations: -41217184383.990364
[2025-06-05 01:03:39] 2025-06-05 05:03:24,253 | INFO     | mean x: 1749092839.8365386
[2025-06-05 01:03:39] 2025-06-05 05:03:24,253 | INFO     | mean y: 2508576.235576923
[2025-06-05 01:03:39] 2025-06-05 05:03:24,253 | INFO     | -- intersect: 25837988184.84733
[2025-06-05 01:03:39] 2025-06-05 05:03:24,253 | INFO     | intersect: 25837988184.84733
[2025-06-05 01:03:39] 2025-06-05 05:03:24,254 | INFO     | chi2: 1.9087599810425797
[2025-06-05 01:03:39] 2025-06-05 05:03:24,254 | INFO     | current chi2=1.9087599810425797 (change=0.35900743245909184 %)
[2025-06-05 01:03:39] 2025-06-05 05:03:24,254 | INFO     | right removable region: 207
[2025-06-05 01:03:39] 2025-06-05 05:03:24,254 | INFO     | sum of square deviations: 2996580785.164304
[2025-06-05 01:03:39] 2025-06-05 05:03:24,256 | INFO     | sum of deviations: -90568891023.0094
[2025-06-05 01:03:39] 2025-06-05 05:03:24,256 | INFO     | mean x: 1749093297.3615024
[2025-06-05 01:03:39] 2025-06-05 05:03:24,256 | INFO     | mean y: 2520508.779342723
[2025-06-05 01:03:39] 2025-06-05 05:03:24,256 | INFO     | -- intersect: 52867252546.739136
[2025-06-05 01:03:39] 2025-06-05 05:03:24,256 | INFO     | intersect: 52867252546.739136
[2025-06-05 01:03:39] 2025-06-05 05:03:24,257 | INFO     | chi2: 1.0938302398013646
[2025-06-05 01:03:39] 2025-06-05 05:03:24,257 | INFO     | current chi2=1.0938302398013646 (change=57.78172491036725 %)
[2025-06-05 01:03:39] 2025-06-05 05:03:24,257 | INFO     | sum of square deviations: 2790451109.4951835
[2025-06-05 01:03:39] 2025-06-05 05:03:24,259 | INFO     | sum of deviations: -85721447592.37494
[2025-06-05 01:03:39] 2025-06-05 05:03:24,259 | INFO     | mean x: 1749093449.8701923
[2025-06-05 01:03:39] 2025-06-05 05:03:24,259 | INFO     | mean y: 2516879.875
[2025-06-05 01:03:39] 2025-06-05 05:03:24,259 | INFO     | -- intersect: 53733908907.144196
[2025-06-05 01:03:39] 2025-06-05 05:03:24,259 | INFO     | intersect: 53733908907.144196
[2025-06-05 01:03:39] 2025-06-05 05:03:24,259 | INFO     | chi2: 1.0738675650522413
[2025-06-05 01:03:39] 2025-06-05 05:03:24,259 | INFO     | current chi2=1.0738675650522413 (change=1.8250249465354351 %)
[2025-06-05 01:03:39] 2025-06-05 05:03:24,260 | INFO     | left removable region: 20
[2025-06-05 01:03:39] 2025-06-05 05:03:24,260 | INFO     | sum of square deviations: 2027663367.2727253
[2025-06-05 01:03:39] 2025-06-05 05:03:24,261 | INFO     | sum of deviations: -51733825062.636284
[2025-06-05 01:03:39] 2025-06-05 05:03:24,261 | INFO     | mean x: 1749093419.3636363
[2025-06-05 01:03:39] 2025-06-05 05:03:24,261 | INFO     | mean y: 2514684.3475935827
[2025-06-05 01:03:39] 2025-06-05 05:03:24,261 | INFO     | -- intersect: 44628903085.92685
[2025-06-05 01:03:39] 2025-06-05 05:03:24,262 | INFO     | intersect: 44628903085.92685
[2025-06-05 01:03:39] 2025-06-05 05:03:24,262 | INFO     | chi2: 0.3360948235983465
[2025-06-05 01:03:39] 2025-06-05 05:03:24,262 | INFO     | -- intersect: 44628903085.92685
[2025-06-05 01:03:39] 2025-06-05 05:03:24,262 | INFO     | current memory leak: -25.51 B/s (using 187 data points, chi2=0.34)
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | ..............................
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | . Timing measurements:
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | . get job = 0 s
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | . initial setup = 2 s
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | . payload setup = 8 s
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | . stage-in = 0 s
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | . payload execution = 13270 s
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | . stage-out = 2 s
[2025-06-05 01:03:39] 2025-06-05 05:03:24,263 | INFO     | . log creation = 0 s
[2025-06-05 01:03:39] 2025-06-05 05:03:24,264 | INFO     | ..............................
[2025-06-05 01:03:39] 2025-06-05 05:03:24,373 | INFO     | 
[2025-06-05 01:03:39] 2025-06-05 05:03:24,373 | INFO     | job summary report
[2025-06-05 01:03:39] 2025-06-05 05:03:24,373 | INFO     | --------------------------------------------------
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | PanDA job id: 6667883247
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | task id: 44871837
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | errors: (none)
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | pilot state: finished 
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | transexitcode: 0
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | exeerrorcode: 0
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | exeerrordiag: 
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | exitcode: 0
[2025-06-05 01:03:39] 2025-06-05 05:03:24,374 | INFO     | exitmsg: OK
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | cpuconsumptiontime: 64938 s
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | nevents: 400
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | neventsw: 0
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | pid: 999994
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | pgrp: 999994
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | corecount: 10
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | event service: False
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | sizes: {0: 2397221, 1: 2397420, 6: 2397626, 12: 2397654, 13282: 2427659, 13285: 2436600, 13286: 2436784, 13292: 2436954}
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | --------------------------------------------------
[2025-06-05 01:03:39] 2025-06-05 05:03:24,375 | INFO     | 
[2025-06-05 01:03:39] 2025-06-05 05:03:24,376 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 01:03:39] 2025-06-05 05:03:24,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:03:39] 2025-06-05 05:03:24,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:03:39] 2025-06-05 05:03:24,399 | INFO     | job 6667883247 has completed (purged errors)
[2025-06-05 01:03:39] 2025-06-05 05:03:24,399 | INFO     | overall cleanup function is called
[2025-06-05 01:03:39] 2025-06-05 05:03:25,407 | INFO     | --- collectZombieJob: --- 10, [999994]
[2025-06-05 01:03:39] 2025-06-05 05:03:25,407 | INFO     | zombie collector waiting for pid 999994
[2025-06-05 01:03:39] 2025-06-05 05:03:25,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:03:39] 2025-06-05 05:03:25,408 | INFO     | collected zombie processes
[2025-06-05 01:03:39] 2025-06-05 05:03:25,408 | INFO     | will attempt to kill all subprocesses of pid=999994
[2025-06-05 01:03:39] 2025-06-05 05:03:25,800 | INFO     | process IDs to be killed: [999994] (in reverse order)
[2025-06-05 01:03:39] 2025-06-05 05:03:25,913 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:03:39] 2025-06-05 05:03:25,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:03:39] 2025-06-05 05:03:25,928 | INFO     | did not find any defunct processes belonging to 999994
[2025-06-05 01:03:39] 2025-06-05 05:03:25,945 | INFO     | did not find any defunct processes belonging to 999994
[2025-06-05 01:03:39] 2025-06-05 05:03:25,946 | INFO     | ready for new job
[2025-06-05 01:03:39] 2025-06-05 05:03:25,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:03:39] 2025-06-05 05:03:25,952 | INFO     | **************************************
[2025-06-05 01:03:39] 2025-06-05 05:03:25,953 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:03:39] 2025-06-05 05:03:25,953 | INFO     | **************************************
[2025-06-05 01:03:39] 2025-06-05 05:03:25,953 | INFO     | 
[2025-06-05 01:03:39] 2025-06-05 05:03:25,955 | INFO     | architecture information:
[2025-06-05 01:03:39] 2025-06-05 05:03:25,956 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:03:39] 2025-06-05 05:03:25,976 | INFO     | cat /etc/os-release:
[2025-06-05 01:03:39] NAME="CentOS Linux"
[2025-06-05 01:03:39] VERSION="7 (Core)"
[2025-06-05 01:03:39] ID="centos"
[2025-06-05 01:03:39] ID_LIKE="rhel fedora"
[2025-06-05 01:03:39] VERSION_ID="7"
[2025-06-05 01:03:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:03:39] ANSI_COLOR="0;31"
[2025-06-05 01:03:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:03:39] HOME_URL="https://www.centos.org/"
[2025-06-05 01:03:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:03:39] 
[2025-06-05 01:03:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:03:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:03:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:03:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:03:39] 
[2025-06-05 01:03:39] 2025-06-05 05:03:25,976 | INFO     | **************************************
[2025-06-05 01:03:39] 2025-06-05 05:03:26,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 01:03:39] 2025-06-05 05:03:26,500 | INFO     | sufficient remaining disk space (76481036288 B)
[2025-06-05 01:03:39] 2025-06-05 05:03:26,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:03:39] 2025-06-05 05:03:26,501 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:03:39] 2025-06-05 05:03:26,501 | INFO     | update_server=False
[2025-06-05 01:03:39] 2025-06-05 05:03:26,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:03:39] 2025-06-05 05:03:26,541 | INFO     | all payload control threads have been joined
[2025-06-05 01:03:39] 2025-06-05 05:03:26,776 | INFO     | all data control threads have been joined
[2025-06-05 01:03:39] 2025-06-05 05:03:26,964 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 01:03:39] 2025-06-05 05:03:26,964 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 01:03:39] 2025-06-05 05:03:26,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:03:39] 2025-06-05 05:03:26,965 | INFO     | will abort loop
[2025-06-05 01:03:39] 2025-06-05 05:03:27,006 | INFO     | all job control threads have been joined
[2025-06-05 01:03:39] 2025-06-05 05:03:27,157 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:03:39] 2025-06-05 05:03:27,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:03:39] 2025-06-05 05:03:27,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:03:39] 2025-06-05 05:03:27,507 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:27,545 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:27,546 | INFO     | [payload] control thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:27,628 | INFO     | [job] validate thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:27,781 | INFO     | [data] control thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:27,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:03:39] 2025-06-05 05:03:27,973 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:28,012 | INFO     | [job] control thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:28,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:28,266 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:28,454 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:28,475 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:28,578 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:28,816 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:29,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:03:39] 2025-06-05 05:03:29,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:03:39] 2025-06-05 05:03:29,937 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:30,392 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:33,029 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:03:39] 2025-06-05 05:03:33,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097668822848)>', '<ExcThread(monitor, started 140097169110784)>']
[2025-06-05 01:03:39] 2025-06-05 05:03:34,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:03:39] 2025-06-05 05:03:34,200 | INFO     | [monitor] control thread has ended
[2025-06-05 01:03:39] 2025-06-05 05:03:38,774 | INFO     | all workflow threads have been joined
[2025-06-05 01:03:39] 2025-06-05 05:03:38,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:03:39] 2025-06-05 05:03:38,775 | INFO     | traces error code: 0
[2025-06-05 01:03:39] 2025-06-05 05:03:38,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:03:39] 2025-06-05 05:03:38,961 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:03:39] 2025-06-05 05:03:38,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:03:39] 2025-06-05 05:03:38,967 [wrapper] pilotpid: 993190
[2025-06-05 01:03:39] 2025-06-05 05:03:38,970 [wrapper] Pilot exit status: 0
[2025-06-05 01:03:39] 2025-06-05 05:03:38,980 [wrapper] pandaids: 6667883247
[2025-06-05 01:03:39] 2025-06-05 05:03:39,042 [wrapper] cleanup supervisor_pilot 2036948 993191
[2025-06-05 01:03:39] 2025-06-05 05:03:39,044 [wrapper] Test setup, not cleaning
[2025-06-05 01:03:39] 2025-06-05 05:03:39,046 [wrapper] apfmon messages muted
[2025-06-05 01:03:39] 2025-06-05 05:03:39,049 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:03:39] 2025-06-05 05:03:39,052 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:03:39]  *** Error codes and diagnostics ***
[2025-06-05 01:03:39]     "exeErrorCode": 0,
[2025-06-05 01:03:39]     "exeErrorDiag": "",
[2025-06-05 01:03:39]     "pilotErrorCode": 0,
[2025-06-05 01:03:39]     "pilotErrorDiag": "",
[2025-06-05 01:03:39]  *** Listing of results directory ***
[2025-06-05 01:03:39] total 420292
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas    495897 May 27 20:38 pilot3.tar.gz
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas      5111 May 27 21:16 queuedata.json
[2025-06-05 01:03:39] -rwx------. 1 boincer umatlas     37140 May 27 21:17 runpilot2-wrapper.sh
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas       100 Jun  4 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:03:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 21:21 run_atlas
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas       105 Jun  4 21:21 job.xml
[2025-06-05 01:03:39] -rw-r--r--. 2 boincer umatlas 223952199 Jun  4 21:21 EVNT.44871834._002994.pool.root.1
[2025-06-05 01:03:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 21:21 shared
[2025-06-05 01:03:39] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 21:21 input.tar.gz
[2025-06-05 01:03:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:21 start_atlas.sh
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas         0 Jun  4 21:21 boinc_lockfile
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 21:21 pandaJob.out
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas    987109 Jun  4 21:21 agis_schedconf.cvmfs.json
[2025-06-05 01:03:39] drwx------. 4 boincer umatlas      4096 Jun  4 21:21 pilot3
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas 199478156 Jun  5 01:02 HITS.44871837._076552.pool.root.1
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas       531 Jun  5 01:02 boinc_task_state.xml
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas        95 Jun  5 01:02 pilot_heartbeat.json
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas      6672 Jun  5 01:02 init_data.xml
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas      1054 Jun  5 01:03 memory_monitor_summary.json
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas   1598969 Jun  5 01:03 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas    426150 Jun  5 01:03 log.44871837._076552.job.log.tgz.1
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas      7756 Jun  5 01:03 heartbeat.json
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 01:03 boinc_mmap_file
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas        28 Jun  5 01:03 wrapper_checkpoint.txt
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas      4539 Jun  5 01:03 pilotlog.txt
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas   1133354 Jun  5 01:03 log.44871837._076552.job.log.1
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas       357 Jun  5 01:03 output.list
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas       620 Jun  5 01:03 runtime_log
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas   1576960 Jun  5 01:03 result.tar.gz
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas      8647 Jun  5 01:03 runtime_log.err
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas       657 Jun  5 01:03 0cLKDmdbKe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbtaKDmFSw6fm.diag
[2025-06-05 01:03:39] -rw-r--r--. 1 boincer umatlas     20860 Jun  5 01:03 stderr.txt
[2025-06-05 01:03:39] HITS file was successfully produced:
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas 199478156 Jun  5 01:02 shared/HITS.pool.root.1
[2025-06-05 01:03:39]  *** Contents of shared directory: ***
[2025-06-05 01:03:39] total 415572
[2025-06-05 01:03:39] -rw-r--r--. 2 boincer umatlas 223952199 Jun  4 21:21 ATLAS.root_0
[2025-06-05 01:03:39] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 21:21 input.tar.gz
[2025-06-05 01:03:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:21 start_atlas.sh
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas 199478156 Jun  5 01:02 HITS.pool.root.1
[2025-06-05 01:03:39] -rw-------. 1 boincer umatlas   1576960 Jun  5 01:03 result.tar.gz
01:03:41 (986846): run_atlas exited; CPU time 65427.025444
01:03:41 (986846): called boinc_finish(0)

</stderr_txt>
]]>

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