Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:41:17 (18602): wrapper (7.7.26015): starting
06:41:17 (18602): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:41:17] Arguments: --nthreads 8
[2025-06-05 06:41:17] Threads: 8
[2025-06-05 06:41:17] Checking for CVMFS
[2025-06-05 06:41:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:41:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:41:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:41:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:41:19] 2.11.2.0 20313 34362 92872 146806 3 18 13106556 25165825 2749 130560 0 18214801 99.791 20779017 5165 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 06:41:19] CVMFS is ok
[2025-06-05 06:41:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:41:19] Checking for apptainer binary...
[2025-06-05 06:41:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:41:19] Running /usr/bin/apptainer --version
[2025-06-05 06:41:19] apptainer version 1.3.2-1.el7
[2025-06-05 06:41:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:11:45] cg-vwn236.simple-grid.lan
[2025-06-05 07:11:45] apptainer works
[2025-06-05 07:11:45] Set ATHENA_PROC_NUMBER=8
[2025-06-05 07:11:45] Set ATHENA_CORE_NUMBER=8
[2025-06-05 07:11:45] Starting ATLAS job with PandaID=6668531220
[2025-06-05 07:11:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:50:31]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:50:31] 2025-06-05 10:45:21,476 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6668531220/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:50:31] 2025-06-05 10:45:21,477 | INFO     | extracted standard info from prmon json
[2025-06-05 12:50:31] 2025-06-05 10:45:21,477 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:50:31] 2025-06-05 10:45:21,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:50:31] 2025-06-05 10:45:21,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:50:31] 2025-06-05 10:45:21,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:50:31] 2025-06-05 10:45:21,484 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:50:31] 2025-06-05 10:45:21,485 | INFO     | sum of square deviations: 9691828230.0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,488 | INFO     | sum of deviations: 81059263972.99997
[2025-06-05 12:50:31] 2025-06-05 10:45:21,488 | INFO     | mean x: 1749110592.0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,488 | INFO     | mean y: 2477563.574603175
[2025-06-05 12:50:31] 2025-06-05 10:45:21,489 | INFO     | -- intersect: -14626508199.506575
[2025-06-05 12:50:31] 2025-06-05 10:45:21,489 | INFO     | intersect: -14626508199.506575
[2025-06-05 12:50:31] 2025-06-05 10:45:21,490 | INFO     | chi2: 7.477816481195337
[2025-06-05 12:50:31] 2025-06-05 10:45:21,490 | INFO     | sum of square deviations: 9237596457.5
[2025-06-05 12:50:31] 2025-06-05 10:45:21,494 | INFO     | sum of deviations: 100832659802.99998
[2025-06-05 12:50:31] 2025-06-05 10:45:21,494 | INFO     | mean x: 1749110439.5
[2025-06-05 12:50:31] 2025-06-05 10:45:21,494 | INFO     | mean y: 2484111.561290323
[2025-06-05 12:50:31] 2025-06-05 10:45:21,494 | INFO     | -- intersect: -19089869480.133728
[2025-06-05 12:50:31] 2025-06-05 10:45:21,494 | INFO     | intersect: -19089869480.133728
[2025-06-05 12:50:31] 2025-06-05 10:45:21,495 | INFO     | chi2: 6.7586315405266975
[2025-06-05 12:50:31] 2025-06-05 10:45:21,495 | INFO     | current chi2=6.7586315405266975 (change=9.617579442838597 %)
[2025-06-05 12:50:31] 2025-06-05 10:45:21,495 | INFO     | right removable region: 309
[2025-06-05 12:50:31] 2025-06-05 10:45:21,496 | INFO     | sum of square deviations: 9237596457.5
[2025-06-05 12:50:31] 2025-06-05 10:45:21,499 | INFO     | sum of deviations: -29788649659.0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,500 | INFO     | mean x: 1749110744.5
[2025-06-05 12:50:31] 2025-06-05 10:45:21,500 | INFO     | mean y: 2514755.077419355
[2025-06-05 12:50:31] 2025-06-05 10:45:21,500 | INFO     | -- intersect: 5642904809.18075
[2025-06-05 12:50:31] 2025-06-05 10:45:21,500 | INFO     | intersect: 5642904809.18075
[2025-06-05 12:50:31] 2025-06-05 10:45:21,500 | INFO     | chi2: 2.677916649808038
[2025-06-05 12:50:31] 2025-06-05 10:45:21,501 | INFO     | current chi2=2.677916649808038 (change=64.18852138799787 %)
[2025-06-05 12:50:31] 2025-06-05 10:45:21,501 | INFO     | sum of square deviations: 8797783560.0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,504 | INFO     | sum of deviations: -88642462319.99998
[2025-06-05 12:50:31] 2025-06-05 10:45:21,505 | INFO     | mean x: 1749110897.0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,505 | INFO     | mean y: 2535074.131147541
[2025-06-05 12:50:31] 2025-06-05 10:45:21,505 | INFO     | -- intersect: 17625780261.22051
[2025-06-05 12:50:31] 2025-06-05 10:45:21,505 | INFO     | intersect: 17625780261.22051
[2025-06-05 12:50:31] 2025-06-05 10:45:21,506 | INFO     | chi2: 1.0619898393621994
[2025-06-05 12:50:31] 2025-06-05 10:45:21,506 | INFO     | current chi2=1.0619898393621994 (change=60.34268507056311 %)
[2025-06-05 12:50:31] 2025-06-05 10:45:21,506 | INFO     | sum of square deviations: 8372156975.0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,509 | INFO     | sum of deviations: -93277582242.5
[2025-06-05 12:50:31] 2025-06-05 10:45:21,510 | INFO     | mean x: 1749111049.5
[2025-06-05 12:50:31] 2025-06-05 10:45:21,510 | INFO     | mean y: 2536714.3233333332
[2025-06-05 12:50:31] 2025-06-05 10:45:21,510 | INFO     | -- intersect: 19490089355.559105
[2025-06-05 12:50:31] 2025-06-05 10:45:21,510 | INFO     | intersect: 19490089355.559105
[2025-06-05 12:50:31] 2025-06-05 10:45:21,511 | INFO     | chi2: 1.0205762486590106
[2025-06-05 12:50:31] 2025-06-05 10:45:21,511 | INFO     | current chi2=1.0205762486590106 (change=3.8996221214376723 %)
[2025-06-05 12:50:31] 2025-06-05 10:45:21,511 | INFO     | left removable region: 30
[2025-06-05 12:50:31] 2025-06-05 10:45:21,511 | INFO     | sum of square deviations: 6734191380.0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,514 | INFO     | sum of deviations: -44782386950.99999
[2025-06-05 12:50:31] 2025-06-05 10:45:21,515 | INFO     | mean x: 1749111324.0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,515 | INFO     | mean y: 2534002.129032258
[2025-06-05 12:50:31] 2025-06-05 10:45:21,515 | INFO     | -- intersect: 11634128014.199406
[2025-06-05 12:50:31] 2025-06-05 10:45:21,515 | INFO     | intersect: 11634128014.199406
[2025-06-05 12:50:31] 2025-06-05 10:45:21,515 | INFO     | chi2: 0.19420753767774943
[2025-06-05 12:50:31] 2025-06-05 10:45:21,516 | INFO     | -- intersect: 11634128014.199406
[2025-06-05 12:50:31] 2025-06-05 10:45:21,516 | INFO     | current memory leak: -6.65 B/s (using 279 data points, chi2=0.19)
[2025-06-05 12:50:31] 2025-06-05 10:45:21,517 | INFO     | ..............................
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | . Timing measurements:
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | . get job = 0 s
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | . initial setup = 11 s
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | . payload setup = 165 s
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | . stage-in = 0 s
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | . payload execution = 19358 s
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | . stage-out = 3 s
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | . log creation = 1 s
[2025-06-05 12:50:31] 2025-06-05 10:45:21,518 | INFO     | ..............................
[2025-06-05 12:50:31] 2025-06-05 10:45:21,678 | INFO     | 
[2025-06-05 12:50:31] 2025-06-05 10:45:21,678 | INFO     | job summary report
[2025-06-05 12:50:31] 2025-06-05 10:45:21,678 | INFO     | --------------------------------------------------
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | PanDA job id: 6668531220
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | task id: 44871837
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | errors: (none)
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | pilot state: finished 
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | transexitcode: 0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | exeerrorcode: 0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | exeerrordiag: 
[2025-06-05 12:50:31] 2025-06-05 10:45:21,679 | INFO     | exitcode: 0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | exitmsg: OK
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | cpuconsumptiontime: 73239 s
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | nevents: 400
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | neventsw: 0
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | pid: 19494
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | pgrp: 19494
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | corecount: 8
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | event service: False
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | sizes: {0: 2397166, 1: 2397421, 12: 2397421, 23: 2397449, 34: 2397477, 44: 2397505, 55: 2397661, 66: 2397689, 77: 2397717, 87: 2398007, 19528: 2429872, 19529: 2430
[2025-06-05 12:50:31] 2025-06-05 10:45:21,680 | INFO     | --------------------------------------------------
[2025-06-05 12:50:31] 2025-06-05 10:45:21,681 | INFO     | 
[2025-06-05 12:50:31] 2025-06-05 10:45:21,681 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-06-05 12:50:31] 2025-06-05 10:45:22,256 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,257 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,257 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,257 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:50:31] 2025-06-05 10:45:22,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,259 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:50:31] 2025-06-05 10:45:22,260 | INFO     | job 6668531220 has completed (purged errors)
[2025-06-05 12:50:31] 2025-06-05 10:45:22,260 | INFO     | overall cleanup function is called
[2025-06-05 12:50:31] 2025-06-05 10:45:23,273 | INFO     | --- collectZombieJob: --- 10, [19494]
[2025-06-05 12:50:31] 2025-06-05 10:45:23,273 | INFO     | zombie collector waiting for pid 19494
[2025-06-05 12:50:31] 2025-06-05 10:45:23,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:50:31] 2025-06-05 10:45:23,274 | INFO     | collected zombie processes
[2025-06-05 12:50:31] 2025-06-05 10:45:23,274 | INFO     | will attempt to kill all subprocesses of pid=19494
[2025-06-05 12:50:31] 2025-06-05 10:45:23,407 | INFO     | process IDs to be killed: [19494] (in reverse order)
[2025-06-05 12:50:31] 2025-06-05 10:45:24,453 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:50:31] 2025-06-05 10:45:24,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:50:31] 2025-06-05 10:45:24,457 | INFO     | did not find any defunct processes belonging to 19494
[2025-06-05 12:50:31] 2025-06-05 10:45:24,461 | INFO     | did not find any defunct processes belonging to 19494
[2025-06-05 12:50:31] 2025-06-05 10:45:24,461 | INFO     | ready for new job
[2025-06-05 12:50:31] 2025-06-05 10:45:24,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:50:31] 2025-06-05 10:45:24,464 | INFO     | **************************************
[2025-06-05 12:50:31] 2025-06-05 10:45:24,464 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:50:31] 2025-06-05 10:45:24,464 | INFO     | **************************************
[2025-06-05 12:50:31] 2025-06-05 10:45:24,464 | INFO     | 
[2025-06-05 12:50:31] 2025-06-05 10:45:24,465 | INFO     | pilot is running in a VM
[2025-06-05 12:50:31] 2025-06-05 10:45:24,465 | INFO     | architecture information:
[2025-06-05 12:50:31] 2025-06-05 10:45:24,481 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:50:31] 2025-06-05 10:45:24,780 | INFO     | cat /etc/os-release:
[2025-06-05 12:50:31] NAME="CentOS Linux"
[2025-06-05 12:50:31] VERSION="7 (Core)"
[2025-06-05 12:50:31] ID="centos"
[2025-06-05 12:50:31] ID_LIKE="rhel fedora"
[2025-06-05 12:50:31] VERSION_ID="7"
[2025-06-05 12:50:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:50:31] ANSI_COLOR="0;31"
[2025-06-05 12:50:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:50:31] HOME_URL="https://www.centos.org/"
[2025-06-05 12:50:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:50:31] 
[2025-06-05 12:50:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:50:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:50:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:50:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:50:31] 
[2025-06-05 12:50:31] 2025-06-05 10:45:24,781 | INFO     | **************************************
[2025-06-05 12:50:31] 2025-06-05 10:45:25,284 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-06-05 12:50:31] 2025-06-05 10:45:25,572 | INFO     | sufficient remaining disk space (497451794432 B)
[2025-06-05 12:50:31] 2025-06-05 10:45:25,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:50:31] 2025-06-05 10:45:25,573 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:50:31] 2025-06-05 10:45:25,573 | INFO     | update_server=False
[2025-06-05 12:50:31] 2025-06-05 10:45:25,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:50:31] 2025-06-05 10:45:25,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:50:31] 2025-06-05 10:45:26,138 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:50:31] 2025-06-05 10:45:26,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:50:31] 2025-06-05 10:45:26,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:50:31] 2025-06-05 10:45:26,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:50:31] 2025-06-05 10:45:26,285 | INFO     | aborting loop
[2025-06-05 12:50:31] 2025-06-05 10:45:26,324 | INFO     | all job control threads have been joined
[2025-06-05 12:50:31] 2025-06-05 10:45:26,557 | INFO     | all data control threads have been joined
[2025-06-05 12:50:31] 2025-06-05 10:45:26,579 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:26,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:50:31] 2025-06-05 10:45:26,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:50:31] 2025-06-05 10:45:26,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,009 | INFO     | all payload control threads have been joined
[2025-06-05 12:50:31] 2025-06-05 10:45:27,126 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,137 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,290 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,330 | INFO     | [job] control thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,481 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,486 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,559 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,564 | INFO     | [data] control thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,578 | INFO     | [job] validate thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:27,679 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:28,015 | INFO     | [payload] control thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:28,079 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:28,787 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:29,704 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:50:31] 2025-06-05 10:45:30,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058303301440)>', '<ExcThread(monitor, started 140057725884160)>']
[2025-06-05 12:50:31] 2025-06-05 10:45:31,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:50:31] 2025-06-05 10:45:31,169 | INFO     | [monitor] control thread has ended
[2025-06-05 12:50:31] 2025-06-05 10:45:35,452 | INFO     | all workflow threads have been joined
[2025-06-05 12:50:31] 2025-06-05 10:45:35,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:50:31] 2025-06-05 10:45:35,453 | INFO     | traces error code: 0
[2025-06-05 12:50:31] 2025-06-05 10:45:35,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:50:31] 2025-06-05 10:45:35,808 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:50:31] 2025-06-05 10:45:35,918 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:50:31] 2025-06-05 10:45:36,037 [wrapper] pilotpid: 8943
[2025-06-05 12:50:31] 2025-06-05 10:45:36,086 [wrapper] Pilot exit status: 0
[2025-06-05 12:50:31] 2025-06-05 10:45:36,560 [wrapper] pandaids: 6668531220
[2025-06-05 12:50:31] 2025-06-05 10:45:37,342 [wrapper] cleanup supervisor_pilot 26341 8944
[2025-06-05 12:50:31] 2025-06-05 10:45:37,471 [wrapper] Test setup, not cleaning
[2025-06-05 12:50:31] 2025-06-05 10:45:37,571 [wrapper] apfmon messages muted
[2025-06-05 12:50:31] 2025-06-05 10:45:37,654 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:50:31] 2025-06-05 10:45:37,705 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:50:31]  *** Error codes and diagnostics ***
[2025-06-05 12:50:31]     "exeErrorCode": 0,
[2025-06-05 12:50:31]     "exeErrorDiag": "",
[2025-06-05 12:50:31]     "pilotErrorCode": 0,
[2025-06-05 12:50:31]     "pilotErrorDiag": "",
[2025-06-05 12:50:31]  *** Listing of results directory ***
[2025-06-05 12:50:31] total 424192
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc    495897 May 28 15:15 pilot3.tar.gz
[2025-06-05 12:50:31] -rwx------. 1 boinc boinc     37140 May 28 15:43 runpilot2-wrapper.sh
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc      5111 May 28 15:43 queuedata.json
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc       100 Jun  5 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:50:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 06:41 run_atlas
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc       105 Jun  5 06:41 job.xml
[2025-06-05 12:50:31] -rw-r--r--. 2 boinc boinc 221238619 Jun  5 06:41 EVNT.44871834._003316.pool.root.1
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc      6392 Jun  5 06:41 init_data.xml
[2025-06-05 12:50:31] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:41 start_atlas.sh
[2025-06-05 12:50:31] drwxrwx--x. 2 boinc boinc        68 Jun  5 06:41 shared
[2025-06-05 12:50:31] -rw-r--r--. 2 boinc boinc    508874 Jun  5 06:41 input.tar.gz
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc         0 Jun  5 06:41 boinc_lockfile
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc      2559 Jun  5 07:11 pandaJob.out
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc    987109 Jun  5 07:15 agis_schedconf.cvmfs.json
[2025-06-05 12:50:31] drwx------. 4 boinc boinc      4096 Jun  5 07:15 pilot3
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc 205115620 Jun  5 12:42 HITS.44871837._085046.pool.root.1
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc       531 Jun  5 12:42 boinc_task_state.xml
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc      1015 Jun  5 12:43 memory_monitor_summary.json
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc   1598969 Jun  5 12:43 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc    425907 Jun  5 12:43 log.44871837._085046.job.log.tgz.1
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc        95 Jun  5 12:45 pilot_heartbeat.json
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc      7689 Jun  5 12:45 heartbeat.json
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc      4417 Jun  5 12:45 pilotlog.txt
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc   1669983 Jun  5 12:45 log.44871837._085046.job.log.1
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc       357 Jun  5 12:45 output.list
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc       620 Jun  5 12:45 runtime_log
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc   2119680 Jun  5 12:45 result.tar.gz
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc       657 Jun  5 12:45 YTHLDmmEWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEGcKDmizI2Nm.diag
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc      8673 Jun  5 12:45 runtime_log.err
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc      8192 Jun  5 12:50 boinc_mmap_file
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc        28 Jun  5 12:50 wrapper_checkpoint.txt
[2025-06-05 12:50:31] -rw-r--r--. 1 boinc boinc     20531 Jun  5 12:50 stderr.txt
[2025-06-05 12:50:31] HITS file was successfully produced:
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc 205115620 Jun  5 12:42 shared/HITS.pool.root.1
[2025-06-05 12:50:31]  *** Contents of shared directory: ***
[2025-06-05 12:50:31] total 418956
[2025-06-05 12:50:31] -rw-r--r--. 2 boinc boinc 221238619 Jun  5 06:41 ATLAS.root_0
[2025-06-05 12:50:31] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:41 start_atlas.sh
[2025-06-05 12:50:31] -rw-r--r--. 2 boinc boinc    508874 Jun  5 06:41 input.tar.gz
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc 205115620 Jun  5 12:42 HITS.pool.root.1
[2025-06-05 12:50:31] -rw-------. 1 boinc boinc   2119680 Jun  5 12:45 result.tar.gz
12:50:33 (18602): run_atlas exited; CPU time 73501.538415
12:50:33 (18602): called boinc_finish(0)

</stderr_txt>
]]>

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