Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:12:14 (3192811): wrapper (7.7.26015): starting
05:12:14 (3192811): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 05:12:14] Arguments: --nthreads 3
[2025-06-05 05:12:14] Threads: 3
[2025-06-05 05:12:14] Checking for CVMFS
[2025-06-05 05:12:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:12:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:12:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:12:15] 2.9.2.0 3164932 116 49992 146802 3 56 30624963 36864000 0 130560 0 72522 99.995 3958 4518 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 05:12:15] CVMFS is ok
[2025-06-05 05:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:12:15] Further information can be found at the LHC@home message board.
[2025-06-05 05:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:12:15] Checking for apptainer binary...
[2025-06-05 05:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:12:15] Running /usr/bin/apptainer --version
[2025-06-05 05:12:15] apptainer version 1.3.6-6.1
[2025-06-05 05:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:12:15] cosA133a
[2025-06-05 05:12:15] apptainer works
[2025-06-05 05:12:15] Set ATHENA_PROC_NUMBER=3
[2025-06-05 05:12:15] Set ATHENA_CORE_NUMBER=3
[2025-06-05 05:12:15] Starting ATLAS job with PandaID=6668235327
[2025-06-05 05:12:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:04:19]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:04:19] 2025-06-05 05:04:06,038 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 07:04:19] 2025-06-05 05:04:06,038 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6668235327/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,038 | INFO     | extracted standard info from prmon json
[2025-06-05 07:04:19] 2025-06-05 05:04:06,038 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:04:19] 2025-06-05 05:04:06,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:04:19] 2025-06-05 05:04:06,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:04:19] 2025-06-05 05:04:06,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:04:19] 2025-06-05 05:04:06,039 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:04:19] 2025-06-05 05:04:06,039 | INFO     | sum of square deviations: 412686807.5
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | sum of deviations: 6462557495.5
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | mean x: 1749096496.5
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | mean y: 2304238.590909091
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | -- intersect: -27388047157.143654
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | intersect: -27388047157.143654
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | chi2: 2.1150012565359746
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | sum of square deviations: 358927660.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | sum of deviations: 12000241836.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | mean x: 1749096344.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | mean y: 2319293.5904761907
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | -- intersect: -58476258597.18408
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | intersect: -58476258597.18408
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | chi2: 1.480774495387489
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | current chi2=1.480774495387489 (change=29.987063089846338 %)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,040 | INFO     | sum of square deviations: 310052325.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | sum of deviations: 11167434669.500002
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | mean x: 1749096191.5
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | mean y: 2316693.83
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | -- intersect: -62996460848.79128
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | intersect: -62996460848.79128
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | chi2: 1.4842108219663463
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | current chi2=1.4842108219663463 (change=-0.23206278805862787 %)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | right removable region: 99
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | sum of square deviations: 358927660.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | sum of deviations: -6251130916.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | mean x: 1749096649.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | mean y: 2339212.3238095236
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | -- intersect: 30464834461.745102
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | intersect: 30464834461.745102
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | chi2: 0.7172476560679296
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | current chi2=0.7172476560679296 (change=66.08760142097202 %)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,041 | INFO     | sum of square deviations: 310052325.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | sum of deviations: -4294340372.5
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | mean x: 1749096801.5
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | mean y: 2333331.65
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | -- intersect: 24227976568.13297
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | intersect: 24227976568.13297
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | chi2: 0.6724180766725886
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | current chi2=0.6724180766725886 (change=6.250223199209073 %)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | left removable region: 20
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | sum of square deviations: 152858680.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | sum of deviations: 234093904.9999999
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | mean x: 1749096771.0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | mean y: 2353197.898734177
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | -- intersect: -2676283653.775509
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | intersect: -2676283653.775509
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | chi2: 0.001784143413539375
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | -- intersect: -2676283653.775509
[2025-06-05 07:04:19] 2025-06-05 05:04:06,042 | INFO     | current memory leak: 1.53 B/s (using 79 data points, chi2=0.00)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | ..............................
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | . Timing measurements:
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | . get job = 0 s
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | . initial setup = 1 s
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | . payload setup = 6 s
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | . stage-in = 0 s
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | . payload execution = 6658 s
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | . stage-out = 0 s
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | . log creation = 0 s
[2025-06-05 07:04:19] 2025-06-05 05:04:06,043 | INFO     | ..............................
[2025-06-05 07:04:19] 2025-06-05 05:04:06,168 | INFO     | 
[2025-06-05 07:04:19] 2025-06-05 05:04:06,168 | INFO     | job summary report
[2025-06-05 07:04:19] 2025-06-05 05:04:06,168 | INFO     | --------------------------------------------------
[2025-06-05 07:04:19] 2025-06-05 05:04:06,168 | INFO     | PanDA job id: 6668235327
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | task id: 44871837
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | errors: (none)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | pilot state: finished 
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | transexitcode: 0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | exeerrorcode: 0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | exeerrordiag: 
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | exitcode: 0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | exitmsg: OK
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | cpuconsumptiontime: 19287 s
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | nevents: 400
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | neventsw: 0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | pid: 3202965
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | pgrp: 3202965
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | corecount: 3
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | event service: False
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | sizes: {0: 2397224, 1: 2397423, 7: 2397629, 11: 2397657, 6669: 2424760, 6670: 2433707, 6673: 2433891, 6684: 2434061}
[2025-06-05 07:04:19] 2025-06-05 05:04:06,169 | INFO     | --------------------------------------------------
[2025-06-05 07:04:19] 2025-06-05 05:04:06,170 | INFO     | 
[2025-06-05 07:04:19] 2025-06-05 05:04:06,170 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 07:04:19] 2025-06-05 05:04:06,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,198 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,198 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,200 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,200 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,200 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,200 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,201 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:04:19] 2025-06-05 05:04:06,202 | INFO     | job 6668235327 has completed (purged errors)
[2025-06-05 07:04:19] 2025-06-05 05:04:06,202 | INFO     | overall cleanup function is called
[2025-06-05 07:04:19] 2025-06-05 05:04:07,211 | INFO     | --- collectZombieJob: --- 10, [3202965]
[2025-06-05 07:04:19] 2025-06-05 05:04:07,211 | INFO     | zombie collector waiting for pid 3202965
[2025-06-05 07:04:19] 2025-06-05 05:04:07,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:04:19] 2025-06-05 05:04:07,212 | INFO     | collected zombie processes
[2025-06-05 07:04:19] 2025-06-05 05:04:07,212 | INFO     | will attempt to kill all subprocesses of pid=3202965
[2025-06-05 07:04:19] 2025-06-05 05:04:07,250 | INFO     | process IDs to be killed: [3202965] (in reverse order)
[2025-06-05 07:04:19] 2025-06-05 05:04:07,276 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:04:19] 2025-06-05 05:04:07,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:04:19] 2025-06-05 05:04:07,278 | INFO     | did not find any defunct processes belonging to 3202965
[2025-06-05 07:04:19] 2025-06-05 05:04:07,279 | INFO     | did not find any defunct processes belonging to 3202965
[2025-06-05 07:04:19] 2025-06-05 05:04:07,279 | INFO     | ready for new job
[2025-06-05 07:04:19] 2025-06-05 05:04:07,279 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:04:19] 2025-06-05 05:04:07,279 | INFO     | **************************************
[2025-06-05 07:04:19] 2025-06-05 05:04:07,279 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:04:19] 2025-06-05 05:04:07,279 | INFO     | **************************************
[2025-06-05 07:04:19] 2025-06-05 05:04:07,279 | INFO     | 
[2025-06-05 07:04:19] 2025-06-05 05:04:07,280 | INFO     | architecture information:
[2025-06-05 07:04:19] 2025-06-05 05:04:07,280 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:04:19] 2025-06-05 05:04:07,290 | INFO     | cat /etc/os-release:
[2025-06-05 07:04:19] NAME="CentOS Linux"
[2025-06-05 07:04:19] VERSION="7 (Core)"
[2025-06-05 07:04:19] ID="centos"
[2025-06-05 07:04:19] ID_LIKE="rhel fedora"
[2025-06-05 07:04:19] VERSION_ID="7"
[2025-06-05 07:04:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:04:19] ANSI_COLOR="0;31"
[2025-06-05 07:04:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:04:19] HOME_URL="https://www.centos.org/"
[2025-06-05 07:04:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:04:19] 
[2025-06-05 07:04:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:04:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:04:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:04:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:04:19] 
[2025-06-05 07:04:19] 2025-06-05 05:04:07,290 | INFO     | **************************************
[2025-06-05 07:04:19] 2025-06-05 05:04:07,794 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 07:04:19] 2025-06-05 05:04:07,807 | INFO     | sufficient remaining disk space (326379765760 B)
[2025-06-05 07:04:19] 2025-06-05 05:04:07,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:04:19] 2025-06-05 05:04:07,808 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:04:19] 2025-06-05 05:04:07,808 | INFO     | update_server=False
[2025-06-05 07:04:19] 2025-06-05 05:04:07,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:04:19] 2025-06-05 05:04:07,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:04:19] 2025-06-05 05:04:07,808 | INFO     | aborting loop
[2025-06-05 07:04:19] 2025-06-05 05:04:07,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:04:19] 2025-06-05 05:04:07,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:04:19] 2025-06-05 05:04:08,204 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:04:19] 2025-06-05 05:04:08,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:04:19] 2025-06-05 05:04:08,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:04:19] 2025-06-05 05:04:08,303 | INFO     | all job control threads have been joined
[2025-06-05 07:04:19] 2025-06-05 05:04:08,333 | INFO     | all data control threads have been joined
[2025-06-05 07:04:19] 2025-06-05 05:04:08,813 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:08,814 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:08,815 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:08,917 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:08,923 | INFO     | all payload control threads have been joined
[2025-06-05 07:04:19] 2025-06-05 05:04:09,036 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:09,138 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:09,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:09,309 | INFO     | [job] control thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:09,339 | INFO     | [data] control thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:09,610 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:09,814 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:09,929 | INFO     | [payload] control thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:09,968 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:10,084 | INFO     | [job] validate thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:10,085 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:10,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:04:19] 2025-06-05 05:04:14,182 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:04:19] 2025-06-05 05:04:14,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692040996672)>', '<ExcThread(monitor, started 139691680569088)>']
[2025-06-05 07:04:19] 2025-06-05 05:04:15,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:04:19] 2025-06-05 05:04:15,243 | INFO     | [monitor] control thread has ended
[2025-06-05 07:04:19] 2025-06-05 05:04:19,676 | INFO     | all workflow threads have been joined
[2025-06-05 07:04:19] 2025-06-05 05:04:19,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:04:19] 2025-06-05 05:04:19,676 | INFO     | traces error code: 0
[2025-06-05 07:04:19] 2025-06-05 05:04:19,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:04:19] 2025-06-05 05:04:19,725 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:04:19] 2025-06-05 05:04:19,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:04:19] 2025-06-05 05:04:19,731 [wrapper] pilotpid: 3196463
[2025-06-05 07:04:19] 2025-06-05 05:04:19,734 [wrapper] Pilot exit status: 0
[2025-06-05 07:04:19] 2025-06-05 05:04:19,742 [wrapper] pandaids: 6668235327
[2025-06-05 07:04:19] 2025-06-05 05:04:19,758 [wrapper] cleanup supervisor_pilot 3217505 3196464
[2025-06-05 07:04:19] 2025-06-05 05:04:19,761 [wrapper] Test setup, not cleaning
[2025-06-05 07:04:19] 2025-06-05 05:04:19,764 [wrapper] apfmon messages muted
[2025-06-05 07:04:19] 2025-06-05 05:04:19,766 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:04:19] 2025-06-05 05:04:19,769 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:04:19]  *** Error codes and diagnostics ***
[2025-06-05 07:04:19]     "exeErrorCode": 0,
[2025-06-05 07:04:19]     "exeErrorDiag": "",
[2025-06-05 07:04:19]     "pilotErrorCode": 0,
[2025-06-05 07:04:19]     "pilotErrorDiag": "",
[2025-06-05 07:04:19]  *** Listing of results directory ***
[2025-06-05 07:04:19] total 414012
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc    495897 May 28 11:21 pilot3.tar.gz
[2025-06-05 07:04:19] -rwx------ 1 boinc boinc     37140 May 28 11:34 runpilot2-wrapper.sh
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc      5111 May 28 11:34 queuedata.json
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc       100 Jun  5 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:04:19] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 05:12 run_atlas
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc       105 Jun  5 05:12 job.xml
[2025-06-05 07:04:19] -rw-r--r-- 2 boinc boinc 224756198 Jun  5 05:12 EVNT.44871834._003205.pool.root.1
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc      6682 Jun  5 05:12 init_data.xml
[2025-06-05 07:04:19] drwxrwx--x 2 boinc boinc      4096 Jun  5 05:12 shared
[2025-06-05 07:04:19] -rw-r--r-- 2 boinc boinc    508870 Jun  5 05:12 input.tar.gz
[2025-06-05 07:04:19] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:12 start_atlas.sh
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc         0 Jun  5 05:12 boinc_lockfile
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc      2559 Jun  5 05:12 pandaJob.out
[2025-06-05 07:04:19] -rw------- 1 boinc boinc    987109 Jun  5 05:12 agis_schedconf.cvmfs.json
[2025-06-05 07:04:19] -rw------- 1 boinc boinc   1598969 Jun  5 05:12 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:04:19] drwx------ 4 boinc boinc      4096 Jun  5 05:12 pilot3
[2025-06-05 07:04:19] -rw------- 1 boinc boinc 193611137 Jun  5 07:03 HITS.44871837._082059.pool.root.1
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc       529 Jun  5 07:03 boinc_task_state.xml
[2025-06-05 07:04:19] -rw------- 1 boinc boinc      1019 Jun  5 07:03 memory_monitor_summary.json
[2025-06-05 07:04:19] -rw------- 1 boinc boinc    233558 Jun  5 07:03 log.44871837._082059.job.log.tgz.1
[2025-06-05 07:04:19] -rw------- 1 boinc boinc        95 Jun  5 07:03 pilot_heartbeat.json
[2025-06-05 07:04:19] -rw------- 1 boinc boinc      7656 Jun  5 07:04 heartbeat.json
[2025-06-05 07:04:19] -rw------- 1 boinc boinc      4357 Jun  5 07:04 pilotlog.txt
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc      8192 Jun  5 07:04 boinc_mmap_file
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc        27 Jun  5 07:04 wrapper_checkpoint.txt
[2025-06-05 07:04:19] -rw------- 1 boinc boinc    636476 Jun  5 07:04 log.44871837._082059.job.log.1
[2025-06-05 07:04:19] -rw------- 1 boinc boinc       357 Jun  5 07:04 output.list
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc       620 Jun  5 07:04 runtime_log
[2025-06-05 07:04:19] -rw------- 1 boinc boinc    890880 Jun  5 07:04 result.tar.gz
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc      8743 Jun  5 07:04 runtime_log.err
[2025-06-05 07:04:19] -rw------- 1 boinc boinc       661 Jun  5 07:04 6piLDmsLSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmymbKDmyIPn4n.diag
[2025-06-05 07:04:19] -rw-r--r-- 1 boinc boinc     20763 Jun  5 07:04 stderr.txt
[2025-06-05 07:04:19] HITS file was successfully produced:
[2025-06-05 07:04:19] -rw------- 1 boinc boinc 193611137 Jun  5 07:03 shared/HITS.pool.root.1
[2025-06-05 07:04:19]  *** Contents of shared directory: ***
[2025-06-05 07:04:19] total 409964
[2025-06-05 07:04:19] -rw-r--r-- 2 boinc boinc 224756198 Jun  5 05:12 ATLAS.root_0
[2025-06-05 07:04:19] -rw-r--r-- 2 boinc boinc    508870 Jun  5 05:12 input.tar.gz
[2025-06-05 07:04:19] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:12 start_atlas.sh
[2025-06-05 07:04:19] -rw------- 1 boinc boinc 193611137 Jun  5 07:03 HITS.pool.root.1
[2025-06-05 07:04:19] -rw------- 1 boinc boinc    890880 Jun  5 07:04 result.tar.gz
07:04:21 (3192811): run_atlas exited; CPU time 19319.702666
07:04:21 (3192811): called boinc_finish(0)

</stderr_txt>
]]>

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