Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:15:37 (3164737): wrapper (7.7.26015): starting
03:15:37 (3164737): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 03:15:37] Arguments: --nthreads 3
[2025-06-05 03:15:37] Threads: 3
[2025-06-05 03:15:37] Checking for CVMFS
[2025-06-05 03:15:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:15:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:15:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:15:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:15:39] 2.9.2.0 3164932 0 29836 146800 3 1 30599855 36864000 0 130560 0 0 0.000 1290 2424 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 03:15:39] CVMFS is ok
[2025-06-05 03:15:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:15:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:15:39] Further information can be found at the LHC@home message board.
[2025-06-05 03:15:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:15:39] Checking for apptainer binary...
[2025-06-05 03:15:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:15:39] Running /usr/bin/apptainer --version
[2025-06-05 03:15:39] apptainer version 1.3.6-6.1
[2025-06-05 03:15:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:15:39] cosA133a
[2025-06-05 03:15:39] apptainer works
[2025-06-05 03:15:39] Set ATHENA_PROC_NUMBER=3
[2025-06-05 03:15:39] Set ATHENA_CORE_NUMBER=3
[2025-06-05 03:15:39] Starting ATLAS job with PandaID=6668051297
[2025-06-05 03:15:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:12:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:12:09] 2025-06-05 03:11:46,519 | INFO     | maximum number of monitored processes: 6
[2025-06-05 05:12:09] 2025-06-05 03:11:49,021 | INFO     | monitor loop #534: job 0:6668051297 is in state 'finished'
[2025-06-05 05:12:09] 2025-06-05 03:11:49,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:12:09] 2025-06-05 03:11:51,524 | INFO     | monitor loop #535: job 0:6668051297 is in state 'finished'
[2025-06-05 05:12:09] 2025-06-05 03:11:51,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,027 | INFO     | monitor loop #536: job 0:6668051297 is in state 'finished'
[2025-06-05 05:12:09] 2025-06-05 03:11:54,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,040 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 05:12:09] 2025-06-05 03:11:54,041 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6668051297/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,041 | INFO     | extracted standard info from prmon json
[2025-06-05 05:12:09] 2025-06-05 03:11:54,041 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:12:09] 2025-06-05 03:11:54,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:12:09] 2025-06-05 03:11:54,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:12:09] 2025-06-05 03:11:54,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:12:09] 2025-06-05 03:11:54,042 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:12:09] 2025-06-05 03:11:54,042 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 05:12:09] 2025-06-05 03:11:54,042 | INFO     | sum of deviations: -4398139589.000001
[2025-06-05 05:12:09] 2025-06-05 03:11:54,042 | INFO     | mean x: 1749089626.5
[2025-06-05 05:12:09] 2025-06-05 03:11:54,042 | INFO     | mean y: 2413896.4385964912
[2025-06-05 05:12:09] 2025-06-05 03:11:54,042 | INFO     | -- intersect: 16748815957.869623
[2025-06-05 05:12:09] 2025-06-05 03:11:54,042 | INFO     | intersect: 16748815957.869623
[2025-06-05 05:12:09] 2025-06-05 03:11:54,042 | INFO     | chi2: 1.5724094066774243
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | sum of square deviations: 401533110.0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | sum of deviations: -3719145051.0000014
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | mean x: 1749089474.0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | mean y: 2415689.4495412842
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | -- intersect: 16203115703.909857
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | intersect: 16203115703.909857
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | chi2: 1.5731521116222513
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | current chi2=1.5731521116222513 (change=-0.04723356027208894 %)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | right removable region: 108
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | sum of square deviations: 401533110.0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | sum of deviations: -19350512353.999992
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | mean x: 1749089779.0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | mean y: 2452340.23853211
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | -- intersect: 84293840855.60808
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | intersect: 84293840855.60808
[2025-06-05 05:12:09] 2025-06-05 03:11:54,043 | INFO     | chi2: 0.08027045261269203
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | current chi2=0.08027045261269203 (change=94.89506662375499 %)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | sum of square deviations: 348769330.0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | sum of deviations: -16047086756.0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | mean x: 1749089931.5
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | mean y: 2442856.846153846
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | -- intersect: 80479123173.9675
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | intersect: 80479123173.9675
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | chi2: 0.07608780996432261
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | current chi2=0.07608780996432261 (change=5.210687758982528 %)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | left removable region: 20
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | sum of square deviations: 211285822.0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | sum of deviations: -11332569477.499998
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | mean x: 1749090053.5
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | mean y: 2434024.4204545454
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | -- intersect: 93816985166.86739
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | intersect: 93816985166.86739
[2025-06-05 05:12:09] 2025-06-05 03:11:54,044 | INFO     | chi2: 0.0686949361496702
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | -- intersect: 93816985166.86739
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | current memory leak: -53.64 B/s (using 88 data points, chi2=0.07)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | ..............................
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | . Timing measurements:
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | . get job = 0 s
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | . initial setup = 1 s
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | . payload setup = 6 s
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | . stage-in = 0 s
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | . payload execution = 6922 s
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | . stage-out = 0 s
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | . log creation = 0 s
[2025-06-05 05:12:09] 2025-06-05 03:11:54,045 | INFO     | ..............................
[2025-06-05 05:12:09] 2025-06-05 03:11:54,076 | INFO     | 
[2025-06-05 05:12:09] 2025-06-05 03:11:54,076 | INFO     | job summary report
[2025-06-05 05:12:09] 2025-06-05 03:11:54,076 | INFO     | --------------------------------------------------
[2025-06-05 05:12:09] 2025-06-05 03:11:54,076 | INFO     | PanDA job id: 6668051297
[2025-06-05 05:12:09] 2025-06-05 03:11:54,076 | INFO     | task id: 44871837
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | errors: (none)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | pilot state: finished 
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | transexitcode: 0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | exeerrorcode: 0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | exeerrordiag: 
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | exitcode: 0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | exitmsg: OK
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | cpuconsumptiontime: 19943 s
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | nevents: 400
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | neventsw: 0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | pid: 3175440
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | pgrp: 3175440
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | corecount: 3
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | event service: False
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | sizes: {0: 2397394, 5: 2397600, 11: 2397656, 6932: 2433790, 6933: 2433790, 6944: 2433960}
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | --------------------------------------------------
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | 
[2025-06-05 05:12:09] 2025-06-05 03:11:54,077 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 05:12:09] 2025-06-05 03:11:54,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | job 6668051297 has completed (purged errors)
[2025-06-05 05:12:09] 2025-06-05 03:11:54,090 | INFO     | overall cleanup function is called
[2025-06-05 05:12:09] 2025-06-05 03:11:55,096 | INFO     | --- collectZombieJob: --- 10, [3175440]
[2025-06-05 05:12:09] 2025-06-05 03:11:55,097 | INFO     | zombie collector waiting for pid 3175440
[2025-06-05 05:12:09] 2025-06-05 03:11:55,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:12:09] 2025-06-05 03:11:55,097 | INFO     | collected zombie processes
[2025-06-05 05:12:09] 2025-06-05 03:11:55,097 | INFO     | will attempt to kill all subprocesses of pid=3175440
[2025-06-05 05:12:09] 2025-06-05 03:11:55,136 | INFO     | process IDs to be killed: [3175440] (in reverse order)
[2025-06-05 05:12:09] 2025-06-05 03:11:55,161 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:12:09] 2025-06-05 03:11:55,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:12:09] 2025-06-05 03:11:55,163 | INFO     | did not find any defunct processes belonging to 3175440
[2025-06-05 05:12:09] 2025-06-05 03:11:55,164 | INFO     | did not find any defunct processes belonging to 3175440
[2025-06-05 05:12:09] 2025-06-05 03:11:55,164 | INFO     | ready for new job
[2025-06-05 05:12:09] 2025-06-05 03:11:55,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:12:09] 2025-06-05 03:11:55,164 | INFO     | **************************************
[2025-06-05 05:12:09] 2025-06-05 03:11:55,164 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:12:09] 2025-06-05 03:11:55,164 | INFO     | **************************************
[2025-06-05 05:12:09] 2025-06-05 03:11:55,164 | INFO     | 
[2025-06-05 05:12:09] 2025-06-05 03:11:55,165 | INFO     | architecture information:
[2025-06-05 05:12:09] 2025-06-05 03:11:55,165 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:12:09] 2025-06-05 03:11:55,175 | INFO     | cat /etc/os-release:
[2025-06-05 05:12:09] NAME="CentOS Linux"
[2025-06-05 05:12:09] VERSION="7 (Core)"
[2025-06-05 05:12:09] ID="centos"
[2025-06-05 05:12:09] ID_LIKE="rhel fedora"
[2025-06-05 05:12:09] VERSION_ID="7"
[2025-06-05 05:12:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:12:09] ANSI_COLOR="0;31"
[2025-06-05 05:12:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:12:09] HOME_URL="https://www.centos.org/"
[2025-06-05 05:12:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:12:09] 
[2025-06-05 05:12:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:12:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:12:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:12:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:12:09] 
[2025-06-05 05:12:09] 2025-06-05 03:11:55,175 | INFO     | **************************************
[2025-06-05 05:12:09] 2025-06-05 03:11:55,679 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 05:12:09] 2025-06-05 03:11:55,691 | INFO     | sufficient remaining disk space (326313705472 B)
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | INFO     | update_server=False
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | INFO     | aborting loop
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:12:09] 2025-06-05 03:11:55,692 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:12:09] 2025-06-05 03:11:55,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:12:09] 2025-06-05 03:11:55,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:12:09] 2025-06-05 03:11:56,279 | INFO     | all data control threads have been joined
[2025-06-05 05:12:09] 2025-06-05 03:11:56,697 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:56,698 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:56,699 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:56,700 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:56,851 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:56,896 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:56,922 | INFO     | all job control threads have been joined
[2025-06-05 05:12:09] 2025-06-05 03:11:56,980 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:57,169 | INFO     | all payload control threads have been joined
[2025-06-05 05:12:09] 2025-06-05 03:11:57,285 | INFO     | [data] control thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:57,403 | INFO     | [job] validate thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:57,505 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:57,632 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:57,699 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:57,911 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:57,929 | INFO     | [job] control thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:58,175 | INFO     | [payload] control thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:11:58,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:12:09] 2025-06-05 03:12:02,684 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:12:09] 2025-06-05 03:12:04,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185285384000)>', '<ExcThread(monitor, started 140184930719488)>']
[2025-06-05 05:12:09] 2025-06-05 03:12:04,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:12:09] 2025-06-05 03:12:04,742 | INFO     | [monitor] control thread has ended
[2025-06-05 05:12:09] 2025-06-05 03:12:09,651 | INFO     | all workflow threads have been joined
[2025-06-05 05:12:09] 2025-06-05 03:12:09,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:12:09] 2025-06-05 03:12:09,652 | INFO     | traces error code: 0
[2025-06-05 05:12:09] 2025-06-05 03:12:09,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:12:09] 2025-06-05 03:12:09,701 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:12:09] 2025-06-05 03:12:09,704 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:12:09] 2025-06-05 03:12:09,707 [wrapper] pilotpid: 3168926
[2025-06-05 05:12:09] 2025-06-05 03:12:09,709 [wrapper] Pilot exit status: 0
[2025-06-05 05:12:09] 2025-06-05 03:12:09,717 [wrapper] pandaids: 6668051297
[2025-06-05 05:12:09] 2025-06-05 03:12:09,733 [wrapper] cleanup supervisor_pilot 3190238 3168927
[2025-06-05 05:12:09] 2025-06-05 03:12:09,735 [wrapper] Test setup, not cleaning
[2025-06-05 05:12:09] 2025-06-05 03:12:09,738 [wrapper] apfmon messages muted
[2025-06-05 05:12:09] 2025-06-05 03:12:09,741 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:12:09] 2025-06-05 03:12:09,744 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:12:09]  *** Error codes and diagnostics ***
[2025-06-05 05:12:09]     "exeErrorCode": 0,
[2025-06-05 05:12:09]     "exeErrorDiag": "",
[2025-06-05 05:12:09]     "pilotErrorCode": 0,
[2025-06-05 05:12:09]     "pilotErrorDiag": "",
[2025-06-05 05:12:09]  *** Listing of results directory ***
[2025-06-05 05:12:09] total 419208
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc    495897 May 28 06:31 pilot3.tar.gz
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc      5111 May 28 07:30 queuedata.json
[2025-06-05 05:12:09] -rwx------ 1 boinc boinc     37140 May 28 07:32 runpilot2-wrapper.sh
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc       100 Jun  5 03:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:12:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 03:15 run_atlas
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc       105 Jun  5 03:15 job.xml
[2025-06-05 05:12:09] -rw-r--r-- 2 boinc boinc 225340949 Jun  5 03:15 EVNT.44871834._003102.pool.root.1
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc      6682 Jun  5 03:15 init_data.xml
[2025-06-05 05:12:09] drwxrwx--x 2 boinc boinc      4096 Jun  5 03:15 shared
[2025-06-05 05:12:09] -rw-r--r-- 2 boinc boinc    508881 Jun  5 03:15 input.tar.gz
[2025-06-05 05:12:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:15 start_atlas.sh
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc         0 Jun  5 03:15 boinc_lockfile
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc      2558 Jun  5 03:15 pandaJob.out
[2025-06-05 05:12:09] -rw------- 1 boinc boinc    987109 Jun  5 03:15 agis_schedconf.cvmfs.json
[2025-06-05 05:12:09] -rw------- 1 boinc boinc   1598969 Jun  5 03:15 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:12:09] drwx------ 4 boinc boinc      4096 Jun  5 03:15 pilot3
[2025-06-05 05:12:09] -rw------- 1 boinc boinc 198296286 Jun  5 05:11 HITS.44871837._079360.pool.root.1
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc       529 Jun  5 05:11 boinc_task_state.xml
[2025-06-05 05:12:09] -rw------- 1 boinc boinc        95 Jun  5 05:11 pilot_heartbeat.json
[2025-06-05 05:12:09] -rw------- 1 boinc boinc      1014 Jun  5 05:11 memory_monitor_summary.json
[2025-06-05 05:12:09] -rw------- 1 boinc boinc    240680 Jun  5 05:11 log.44871837._079360.job.log.tgz.1
[2025-06-05 05:12:09] -rw------- 1 boinc boinc      7657 Jun  5 05:11 heartbeat.json
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc      8192 Jun  5 05:12 boinc_mmap_file
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc        27 Jun  5 05:12 wrapper_checkpoint.txt
[2025-06-05 05:12:09] -rw------- 1 boinc boinc      4480 Jun  5 05:12 pilotlog.txt
[2025-06-05 05:12:09] -rw------- 1 boinc boinc    657176 Jun  5 05:12 log.44871837._079360.job.log.1
[2025-06-05 05:12:09] -rw------- 1 boinc boinc       357 Jun  5 05:12 output.list
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc       620 Jun  5 05:12 runtime_log
[2025-06-05 05:12:09] -rw------- 1 boinc boinc    921600 Jun  5 05:12 result.tar.gz
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc      8743 Jun  5 05:12 runtime_log.err
[2025-06-05 05:12:09] -rw------- 1 boinc boinc       661 Jun  5 05:12 rHPMDm5ZOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3LbKDm927XWm.diag
[2025-06-05 05:12:09] -rw-r--r-- 1 boinc boinc     21032 Jun  5 05:12 stderr.txt
[2025-06-05 05:12:09] HITS file was successfully produced:
[2025-06-05 05:12:09] -rw------- 1 boinc boinc 198296286 Jun  5 05:11 shared/HITS.pool.root.1
[2025-06-05 05:12:09]  *** Contents of shared directory: ***
[2025-06-05 05:12:09] total 415136
[2025-06-05 05:12:09] -rw-r--r-- 2 boinc boinc 225340949 Jun  5 03:15 ATLAS.root_0
[2025-06-05 05:12:09] -rw-r--r-- 2 boinc boinc    508881 Jun  5 03:15 input.tar.gz
[2025-06-05 05:12:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:15 start_atlas.sh
[2025-06-05 05:12:09] -rw------- 1 boinc boinc 198296286 Jun  5 05:11 HITS.pool.root.1
[2025-06-05 05:12:09] -rw------- 1 boinc boinc    921600 Jun  5 05:12 result.tar.gz
05:12:11 (3164737): run_atlas exited; CPU time 19977.167474
05:12:11 (3164737): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN