Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:11:32 (239355): wrapper (7.7.26015): starting
21:11:32 (239355): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 21:11:32] Arguments: --nthreads 10
[2025-06-04 21:11:32] Threads: 10
[2025-06-04 21:11:32] Checking for CVMFS
[2025-06-04 21:11:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:11:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:11:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:11:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:11:33] 2.12.6.0 6643 2100 191188 146799 2 185 32351293 32935936 34827 16776704 0 14733889 99.686 9669051 22600 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 21:11:33] CVMFS is ok
[2025-06-04 21:11:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:11:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:11:33] Further information can be found at the LHC@home message board.
[2025-06-04 21:11:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:11:33] Checking for apptainer binary...
[2025-06-04 21:11:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 21:11:33] Running /usr/bin/apptainer --version
[2025-06-04 21:11:33] apptainer version 1.4.1-1.el9
[2025-06-04 21:11:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:11:33] c-3-40.aglt2.org
[2025-06-04 21:11:33] apptainer works
[2025-06-04 21:11:33] Set ATHENA_PROC_NUMBER=10
[2025-06-04 21:11:33] Set ATHENA_CORE_NUMBER=10
[2025-06-04 21:11:33] Starting ATLAS job with PandaID=6680271068
[2025-06-04 21:11:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:36:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:36:55] 2025-06-05 03:36:37,942 | INFO     | extracted standard info from prmon json
[2025-06-04 23:36:55] 2025-06-05 03:36:37,943 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:36:55] 2025-06-05 03:36:37,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:36:55] 2025-06-05 03:36:37,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:36:55] 2025-06-05 03:36:37,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:36:55] 2025-06-05 03:36:37,947 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:36:55] 2025-06-05 03:36:37,948 | INFO     | sum of square deviations: 887796669.2183099
[2025-06-04 23:36:55] 2025-06-05 03:36:37,949 | INFO     | sum of deviations: 18905037888.380264
[2025-06-04 23:36:55] 2025-06-05 03:36:37,949 | INFO     | mean x: 1749090257.6267605
[2025-06-04 23:36:55] 2025-06-05 03:36:37,949 | INFO     | mean y: 2184930.4788732394
[2025-06-04 23:36:55] 2025-06-05 03:36:37,949 | INFO     | -- intersect: -37243525418.654686
[2025-06-04 23:36:55] 2025-06-05 03:36:37,950 | INFO     | intersect: -37243525418.654686
[2025-06-04 23:36:55] 2025-06-05 03:36:37,950 | INFO     | chi2: 2.6488581417833768
[2025-06-04 23:36:55] 2025-06-05 03:36:37,950 | INFO     | sum of square deviations: 797279531.6350342
[2025-06-04 23:36:55] 2025-06-05 03:36:37,951 | INFO     | sum of deviations: 26582096947.934296
[2025-06-04 23:36:55] 2025-06-05 03:36:37,952 | INFO     | mean x: 1749090105.1313868
[2025-06-04 23:36:55] 2025-06-05 03:36:37,952 | INFO     | mean y: 2197458.5036496352
[2025-06-04 23:36:55] 2025-06-05 03:36:37,952 | INFO     | -- intersect: -58314215920.28432
[2025-06-04 23:36:55] 2025-06-05 03:36:37,952 | INFO     | intersect: -58314215920.28432
[2025-06-04 23:36:55] 2025-06-05 03:36:37,952 | INFO     | chi2: 1.9749904789637205
[2025-06-04 23:36:55] 2025-06-05 03:36:37,953 | INFO     | current chi2=1.9749904789637205 (change=25.439930217099754 %)
[2025-06-04 23:36:55] 2025-06-05 03:36:37,953 | INFO     | sum of square deviations: 713134606.5454576
[2025-06-04 23:36:55] 2025-06-05 03:36:37,954 | INFO     | sum of deviations: 25567548407.81819
[2025-06-04 23:36:55] 2025-06-05 03:36:37,954 | INFO     | mean x: 1749089952.6363637
[2025-06-04 23:36:55] 2025-06-05 03:36:37,954 | INFO     | mean y: 2195614.2045454546
[2025-06-04 23:36:55] 2025-06-05 03:36:37,954 | INFO     | -- intersect: -62706781938.13929
[2025-06-04 23:36:55] 2025-06-05 03:36:37,955 | INFO     | intersect: -62706781938.13929
[2025-06-04 23:36:55] 2025-06-05 03:36:37,955 | INFO     | chi2: 1.9759444958215069
[2025-06-04 23:36:55] 2025-06-05 03:36:37,955 | INFO     | current chi2=1.9759444958215069 (change=-0.04830488389427442 %)
[2025-06-04 23:36:55] 2025-06-05 03:36:37,955 | INFO     | right removable region: 131
[2025-06-04 23:36:55] 2025-06-05 03:36:37,959 | INFO     | sum of square deviations: 797268551.6350342
[2025-06-04 23:36:55] 2025-06-05 03:36:37,961 | INFO     | sum of deviations: -7065430506.905109
[2025-06-04 23:36:55] 2025-06-05 03:36:37,961 | INFO     | mean x: 1749090410.1313868
[2025-06-04 23:36:55] 2025-06-05 03:36:37,962 | INFO     | mean y: 2228323.605839416
[2025-06-04 23:36:55] 2025-06-05 03:36:37,962 | INFO     | -- intersect: 15502747838.30837
[2025-06-04 23:36:55] 2025-06-05 03:36:37,963 | INFO     | intersect: 15502747838.30837
[2025-06-04 23:36:55] 2025-06-05 03:36:37,963 | INFO     | chi2: 0.7663861012218834
[2025-06-04 23:36:55] 2025-06-05 03:36:37,963 | INFO     | current chi2=0.7663861012218834 (change=71.06730295847763 %)
[2025-06-04 23:36:55] 2025-06-05 03:36:37,964 | INFO     | sum of square deviations: 713121246.810607
[2025-06-04 23:36:55] 2025-06-05 03:36:37,964 | INFO     | sum of deviations: -9892089204.083332
[2025-06-04 23:36:55] 2025-06-05 03:36:37,965 | INFO     | mean x: 1749090562.628788
[2025-06-04 23:36:55] 2025-06-05 03:36:37,965 | INFO     | mean y: 2233383.9166666665
[2025-06-04 23:36:55] 2025-06-05 03:36:37,965 | INFO     | -- intersect: 24264811380.19314
[2025-06-04 23:36:55] 2025-06-05 03:36:37,965 | INFO     | intersect: 24264811380.19314
[2025-06-04 23:36:55] 2025-06-05 03:36:37,966 | INFO     | chi2: 0.7312023868285797
[2025-06-04 23:36:55] 2025-06-05 03:36:37,966 | INFO     | current chi2=0.7312023868285797 (change=4.5908601861657905 %)
[2025-06-04 23:36:55] 2025-06-05 03:36:37,966 | INFO     | left removable region: 20
[2025-06-04 23:36:55] 2025-06-05 03:36:37,966 | INFO     | sum of square deviations: 424033705.693695
[2025-06-04 23:36:55] 2025-06-05 03:36:37,967 | INFO     | sum of deviations: -1231072177.4774766
[2025-06-04 23:36:55] 2025-06-05 03:36:37,967 | INFO     | mean x: 1749090532.144144
[2025-06-04 23:36:55] 2025-06-05 03:36:37,967 | INFO     | mean y: 2247885.3423423423
[2025-06-04 23:36:55] 2025-06-05 03:36:37,968 | INFO     | -- intersect: 5080279799.077417
[2025-06-04 23:36:55] 2025-06-05 03:36:37,968 | INFO     | intersect: 5080279799.077417
[2025-06-04 23:36:55] 2025-06-05 03:36:37,968 | INFO     | chi2: 0.03247575506251477
[2025-06-04 23:36:55] 2025-06-05 03:36:37,969 | INFO     | -- intersect: 5080279799.077417
[2025-06-04 23:36:55] 2025-06-05 03:36:37,969 | INFO     | current memory leak: -2.90 B/s (using 111 data points, chi2=0.03)
[2025-06-04 23:36:55] 2025-06-05 03:36:37,970 | INFO     | ..............................
[2025-06-04 23:36:55] 2025-06-05 03:36:37,970 | INFO     | . Timing measurements:
[2025-06-04 23:36:55] 2025-06-05 03:36:37,970 | INFO     | . get job = 0 s
[2025-06-04 23:36:55] 2025-06-05 03:36:37,971 | INFO     | . initial setup = 3 s
[2025-06-04 23:36:55] 2025-06-05 03:36:37,971 | INFO     | . payload setup = 14 s
[2025-06-04 23:36:55] 2025-06-05 03:36:37,971 | INFO     | . stage-in = 0 s
[2025-06-04 23:36:55] 2025-06-05 03:36:37,971 | INFO     | . payload execution = 8637 s
[2025-06-04 23:36:55] 2025-06-05 03:36:37,971 | INFO     | . stage-out = 0 s
[2025-06-04 23:36:55] 2025-06-05 03:36:37,971 | INFO     | . log creation = 0 s
[2025-06-04 23:36:55] 2025-06-05 03:36:37,971 | INFO     | ..............................
[2025-06-04 23:36:55] 2025-06-05 03:36:38,090 | INFO     | 
[2025-06-04 23:36:55] 2025-06-05 03:36:38,090 | INFO     | job summary report
[2025-06-04 23:36:55] 2025-06-05 03:36:38,090 | INFO     | --------------------------------------------------
[2025-06-04 23:36:55] 2025-06-05 03:36:38,091 | INFO     | PanDA job id: 6680271068
[2025-06-04 23:36:55] 2025-06-05 03:36:38,091 | INFO     | task id: 45006595
[2025-06-04 23:36:55] 2025-06-05 03:36:38,092 | INFO     | errors: (none)
[2025-06-04 23:36:55] 2025-06-05 03:36:38,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:36:55] 2025-06-05 03:36:38,093 | INFO     | pilot state: finished 
[2025-06-04 23:36:55] 2025-06-05 03:36:38,093 | INFO     | transexitcode: 0
[2025-06-04 23:36:55] 2025-06-05 03:36:38,093 | INFO     | exeerrorcode: 0
[2025-06-04 23:36:55] 2025-06-05 03:36:38,094 | INFO     | exeerrordiag: 
[2025-06-04 23:36:55] 2025-06-05 03:36:38,094 | INFO     | exitcode: 0
[2025-06-04 23:36:55] 2025-06-05 03:36:38,094 | INFO     | exitmsg: OK
[2025-06-04 23:36:55] 2025-06-05 03:36:38,094 | INFO     | cpuconsumptiontime: 39453 s
[2025-06-04 23:36:55] 2025-06-05 03:36:38,094 | INFO     | nevents: 400
[2025-06-04 23:36:55] 2025-06-05 03:36:38,095 | INFO     | neventsw: 0
[2025-06-04 23:36:55] 2025-06-05 03:36:38,095 | INFO     | pid: 260245
[2025-06-04 23:36:55] 2025-06-05 03:36:38,095 | INFO     | pgrp: 260245
[2025-06-04 23:36:55] 2025-06-05 03:36:38,095 | INFO     | corecount: 10
[2025-06-04 23:36:55] 2025-06-05 03:36:38,095 | INFO     | event service: False
[2025-06-04 23:36:55] 2025-06-05 03:36:38,095 | INFO     | sizes: {0: 2397241, 10: 2397447, 11: 2397475, 8655: 2425112, 8656: 2425111, 8658: 2434292, 8667: 2434406}
[2025-06-04 23:36:55] 2025-06-05 03:36:38,095 | INFO     | --------------------------------------------------
[2025-06-04 23:36:55] 2025-06-05 03:36:38,095 | INFO     | 
[2025-06-04 23:36:55] 2025-06-05 03:36:38,096 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 23:36:55] 2025-06-05 03:36:38,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:36:55] 2025-06-05 03:36:38,131 | INFO     | job 6680271068 has completed (purged errors)
[2025-06-04 23:36:55] 2025-06-05 03:36:38,132 | INFO     | overall cleanup function is called
[2025-06-04 23:36:55] 2025-06-05 03:36:38,485 | INFO     | PID=245164 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 23:36:55] 2025-06-05 03:36:38,487 | INFO     | .. there are 52 such processes running
[2025-06-04 23:36:55] 2025-06-05 03:36:39,144 | INFO     | --- collectZombieJob: --- 10, [260245]
[2025-06-04 23:36:55] 2025-06-05 03:36:39,145 | INFO     | zombie collector waiting for pid 260245
[2025-06-04 23:36:55] 2025-06-05 03:36:39,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:36:55] 2025-06-05 03:36:39,145 | INFO     | collected zombie processes
[2025-06-04 23:36:55] 2025-06-05 03:36:39,145 | INFO     | will attempt to kill all subprocesses of pid=260245
[2025-06-04 23:36:55] 2025-06-05 03:36:39,627 | INFO     | process IDs to be killed: [260245] (in reverse order)
[2025-06-04 23:36:55] 2025-06-05 03:36:39,788 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:36:55] 2025-06-05 03:36:39,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:36:55] 2025-06-05 03:36:39,808 | INFO     | did not find any defunct processes belonging to 260245
[2025-06-04 23:36:55] 2025-06-05 03:36:39,828 | INFO     | did not find any defunct processes belonging to 260245
[2025-06-04 23:36:55] 2025-06-05 03:36:39,829 | INFO     | ready for new job
[2025-06-04 23:36:55] 2025-06-05 03:36:39,829 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:36:55] 2025-06-05 03:36:39,831 | INFO     | **************************************
[2025-06-04 23:36:55] 2025-06-05 03:36:39,831 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:36:55] 2025-06-05 03:36:39,831 | INFO     | **************************************
[2025-06-04 23:36:55] 2025-06-05 03:36:39,831 | INFO     | 
[2025-06-04 23:36:55] 2025-06-05 03:36:39,848 | INFO     | architecture information:
[2025-06-04 23:36:55] 2025-06-05 03:36:39,848 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:36:55] 2025-06-05 03:36:39,865 | INFO     | cat /etc/os-release:
[2025-06-04 23:36:55] NAME="CentOS Linux"
[2025-06-04 23:36:55] VERSION="7 (Core)"
[2025-06-04 23:36:55] ID="centos"
[2025-06-04 23:36:55] ID_LIKE="rhel fedora"
[2025-06-04 23:36:55] VERSION_ID="7"
[2025-06-04 23:36:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:36:55] ANSI_COLOR="0;31"
[2025-06-04 23:36:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:36:55] HOME_URL="https://www.centos.org/"
[2025-06-04 23:36:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:36:55] 
[2025-06-04 23:36:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:36:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:36:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:36:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:36:55] 
[2025-06-04 23:36:55] 2025-06-05 03:36:39,866 | INFO     | **************************************
[2025-06-04 23:36:55] 2025-06-05 03:36:40,369 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 23:36:55] 2025-06-05 03:36:40,393 | INFO     | sufficient remaining disk space (76186386432 B)
[2025-06-04 23:36:55] 2025-06-05 03:36:40,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:36:55] 2025-06-05 03:36:40,394 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:36:55] 2025-06-05 03:36:40,394 | INFO     | update_server=False
[2025-06-04 23:36:55] 2025-06-05 03:36:40,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:36:55] 2025-06-05 03:36:40,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:36:55] 2025-06-05 03:36:40,395 | INFO     | aborting loop
[2025-06-04 23:36:55] 2025-06-05 03:36:40,495 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:36:55] 2025-06-05 03:36:40,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:36:55] 2025-06-05 03:36:40,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:36:55] 2025-06-05 03:36:40,754 | INFO     | all job control threads have been joined
[2025-06-04 23:36:55] 2025-06-05 03:36:40,857 | INFO     | all data control threads have been joined
[2025-06-04 23:36:55] 2025-06-05 03:36:41,134 | INFO     | all payload control threads have been joined
[2025-06-04 23:36:55] 2025-06-05 03:36:41,399 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:41,401 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:41,691 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:41,762 | INFO     | [job] control thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:41,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:36:55] 2025-06-05 03:36:41,854 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:41,864 | INFO     | [data] control thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:42,141 | INFO     | [payload] control thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:42,150 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:42,272 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:42,555 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:42,685 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:42,692 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:42,698 | INFO     | [job] validate thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:43,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:36:55] 2025-06-05 03:36:43,789 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:43,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:36:55] 2025-06-05 03:36:44,109 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:47,907 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:36:55] 2025-06-05 03:36:49,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140376303871808)>', '<ExcThread(monitor, started 140375813506816)>']
[2025-06-04 23:36:55] 2025-06-05 03:36:50,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:36:55] 2025-06-05 03:36:50,552 | INFO     | [monitor] control thread has ended
[2025-06-04 23:36:55] 2025-06-05 03:36:54,903 | INFO     | all workflow threads have been joined
[2025-06-04 23:36:55] 2025-06-05 03:36:54,904 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:36:55] 2025-06-05 03:36:54,904 | INFO     | traces error code: 0
[2025-06-04 23:36:55] 2025-06-05 03:36:54,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:36:55] 2025-06-05 03:36:55,095 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:36:55] 2025-06-05 03:36:55,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:36:55] 2025-06-05 03:36:55,101 [wrapper] pilotpid: 245164
[2025-06-04 23:36:55] 2025-06-05 03:36:55,103 [wrapper] Pilot exit status: 0
[2025-06-04 23:36:55] 2025-06-05 03:36:55,126 [wrapper] pandaids: 6680271068
[2025-06-04 23:36:55] 2025-06-05 03:36:55,249 [wrapper] cleanup supervisor_pilot  980267 245167
[2025-06-04 23:36:55] 2025-06-05 03:36:55,263 [wrapper] Test setup, not cleaning
[2025-06-04 23:36:55] 2025-06-05 03:36:55,290 [wrapper] apfmon messages muted
[2025-06-04 23:36:55] 2025-06-05 03:36:55,301 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:36:55] 2025-06-05 03:36:55,305 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:36:55]  *** Error codes and diagnostics ***
[2025-06-04 23:36:55]     "exeErrorCode": 0,
[2025-06-04 23:36:55]     "exeErrorDiag": "",
[2025-06-04 23:36:55]     "pilotErrorCode": 0,
[2025-06-04 23:36:55]     "pilotErrorDiag": "",
[2025-06-04 23:36:55]  *** Listing of results directory ***
[2025-06-04 23:36:55] total 398012
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 21:01 pilot3.tar.gz
[2025-06-04 23:36:55] -rwx------. 1 boincer umatlas     37140 Jun  4 21:11 runpilot2-wrapper.sh
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 21:11 queuedata.json
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas       100 Jun  4 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:36:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 21:11 run_atlas
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas       105 Jun  4 21:11 job.xml
[2025-06-04 23:36:55] -rw-r--r--. 2 boincer umatlas 218512154 Jun  4 21:11 EVNT.45006593._001934.pool.root.1
[2025-06-04 23:36:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:11 start_atlas.sh
[2025-06-04 23:36:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 21:11 shared
[2025-06-04 23:36:55] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 21:11 input.tar.gz
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas         0 Jun  4 21:11 boinc_lockfile
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 21:11 pandaJob.out
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas    987117 Jun  4 21:11 agis_schedconf.cvmfs.json
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas   1598969 Jun  4 21:11 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:36:55] drwx------. 4 boincer umatlas      4096 Jun  4 21:11 pilot3
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 23:29 init_data.xml
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas 183086245 Jun  4 23:35 HITS.45006595._057006.pool.root.1
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas       529 Jun  4 23:35 boinc_task_state.xml
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas      1042 Jun  4 23:36 memory_monitor_summary.json
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas    374751 Jun  4 23:36 log.45006595._057006.job.log.tgz.1
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas      7717 Jun  4 23:36 heartbeat.json
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas        95 Jun  4 23:36 pilot_heartbeat.json
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 23:36 boinc_mmap_file
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas        27 Jun  4 23:36 wrapper_checkpoint.txt
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas      4353 Jun  4 23:36 pilotlog.txt
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas    696071 Jun  4 23:36 log.45006595._057006.job.log.1
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas       357 Jun  4 23:36 output.list
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas       620 Jun  4 23:36 runtime_log
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas   1085440 Jun  4 23:36 result.tar.gz
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas       650 Jun  4 23:36 BKHLDmWJEh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm63nKDmGyiLyn.diag
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 23:36 runtime_log.err
[2025-06-04 23:36:55] -rw-r--r--. 1 boincer umatlas     20937 Jun  4 23:36 stderr.txt
[2025-06-04 23:36:55] HITS file was successfully produced:
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas 183086245 Jun  4 23:35 shared/HITS.pool.root.1
[2025-06-04 23:36:55]  *** Contents of shared directory: ***
[2025-06-04 23:36:55] total 393772
[2025-06-04 23:36:55] -rw-r--r--. 2 boincer umatlas 218512154 Jun  4 21:11 ATLAS.root_0
[2025-06-04 23:36:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 21:11 start_atlas.sh
[2025-06-04 23:36:55] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 21:11 input.tar.gz
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas 183086245 Jun  4 23:35 HITS.pool.root.1
[2025-06-04 23:36:55] -rw-------. 1 boincer umatlas   1085440 Jun  4 23:36 result.tar.gz
23:36:57 (239355): run_atlas exited; CPU time 39830.214082
23:36:57 (239355): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN