Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:18:20 (686356): wrapper (7.7.26015): starting
22:18:20 (686356): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 22:18:20] Arguments: --nthreads 12
[2025-06-04 22:18:20] Threads: 12
[2025-06-04 22:18:20] Checking for CVMFS
[2025-06-04 22:18:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 22:18:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 22:18:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 22:18:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 22:18:20] 2.12.6.0 32194 1646 126396 146802 3 323 32442827 32935936 12084 16776704 0 7800429 99.792 3916855 38956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 22:18:20] CVMFS is ok
[2025-06-04 22:18:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:18:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:18:20] Further information can be found at the LHC@home message board.
[2025-06-04 22:18:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:18:20] Checking for apptainer binary...
[2025-06-04 22:18:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 22:18:20] Running /usr/bin/apptainer --version
[2025-06-04 22:18:20] apptainer version 1.4.1-1.el9
[2025-06-04 22:18:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:18:20] c6-1-24-4.aglt2.org
[2025-06-04 22:18:20] apptainer works
[2025-06-04 22:18:20] Set ATHENA_PROC_NUMBER=12
[2025-06-04 22:18:20] Set ATHENA_CORE_NUMBER=12
[2025-06-04 22:18:21] Starting ATLAS job with PandaID=6668688824
[2025-06-04 22:18:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:35:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:35:14]  is_altstaged=None
[2025-06-04 23:35:14]  is_tar=False
[2025-06-04 23:35:14]  lfn=log.44871837._087123.job.log.tgz.1
[2025-06-04 23:35:14]  mtime=0
[2025-06-04 23:35:14]  protocol_id=None
[2025-06-04 23:35:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 23:35:14]  replicas=None
[2025-06-04 23:35:14]  scope=mc23_13p6TeV
[2025-06-04 23:35:14]  status=None
[2025-06-04 23:35:14]  status_code=0
[2025-06-04 23:35:14]  storage_token=
[2025-06-04 23:35:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668688824/log.44871837._087123.job.log.tgz.1
[2025-06-04 23:35:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/2f/log.44871837._087123.job.log.tgz.1
[2025-06-04 23:35:14]  workdir=None
[2025-06-04 23:35:14] ]
[2025-06-04 23:35:14] 2025-06-05 03:34:46,998 | INFO     | transferring file log.44871837._087123.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668688824/log.44871837._087123.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 23:35:14] 2025-06-05 03:34:46,998 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668688824/log.44871837._087123.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._087123.job
[2025-06-04 23:35:14] 2025-06-05 03:34:47,017 | INFO     | adding to output.list: log.44871837._087123.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/2f/log.44871837._087123.job.log.tg
[2025-06-04 23:35:14] 2025-06-05 03:34:47,018 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 23:35:14] 2025-06-05 03:34:47,018 | INFO     | summary of transferred files:
[2025-06-04 23:35:14] 2025-06-05 03:34:47,018 | INFO     |  -- lfn=log.44871837._087123.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 23:35:14] 2025-06-05 03:34:47,018 | INFO     | stage-out finished correctly
[2025-06-04 23:35:14] 2025-06-05 03:34:48,010 | INFO     | monitor loop #339: job 0:6668688824 is in state 'finished'
[2025-06-04 23:35:14] 2025-06-05 03:34:48,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:14] 2025-06-05 03:34:50,127 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 23:35:14] 2025-06-05 03:34:50,208 | INFO     | job 6668688824 has state=finished
[2025-06-04 23:35:14] 2025-06-05 03:34:50,208 | INFO     | preparing for final server update for job 6668688824 in state='finished'
[2025-06-04 23:35:14] 2025-06-05 03:34:50,209 | INFO     | this job has now completed (state=finished)
[2025-06-04 23:35:14] 2025-06-05 03:34:50,209 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 23:35:14] 2025-06-05 03:34:50,209 | INFO     | log transfer has been attempted: DONE
[2025-06-04 23:35:14] 2025-06-05 03:34:50,209 | INFO     | job 6668688824 has finished - writing final server update
[2025-06-04 23:35:14] 2025-06-05 03:34:50,209 | INFO     | total number of processed events: 400 (read)
[2025-06-04 23:35:14] 2025-06-05 03:34:50,225 | INFO     | executing command: lscpu
[2025-06-04 23:35:14] 2025-06-05 03:34:50,286 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 23:35:14] 2025-06-05 03:34:50,513 | INFO     | monitor loop #340: job 0:6668688824 is in state 'finished'
[2025-06-04 23:35:14] 2025-06-05 03:34:50,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:14] 2025-06-05 03:34:53,016 | INFO     | monitor loop #341: job 0:6668688824 is in state 'finished'
[2025-06-04 23:35:14] 2025-06-05 03:34:53,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:35:14] 2025-06-05 03:34:53,606 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 23:35:14] 2025-06-05 03:34:53,607 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668688824/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:35:14] 2025-06-05 03:34:53,608 | INFO     | extracted standard info from prmon json
[2025-06-04 23:35:14] 2025-06-05 03:34:53,608 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:35:14] 2025-06-05 03:34:53,608 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:35:14] 2025-06-05 03:34:53,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:35:14] 2025-06-05 03:34:53,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:35:14] 2025-06-05 03:34:53,610 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:35:14] 2025-06-05 03:34:53,611 | INFO     | sum of square deviations: 97479037.0
[2025-06-04 23:35:14] 2025-06-05 03:34:53,611 | INFO     | sum of deviations: -10082918658.5
[2025-06-04 23:35:14] 2025-06-05 03:34:53,611 | INFO     | mean x: 1749092287.5
[2025-06-04 23:35:14] 2025-06-05 03:34:53,611 | INFO     | mean y: 2696961.338235294
[2025-06-04 23:35:14] 2025-06-05 03:34:53,611 | INFO     | -- intersect: 180923188216.00867
[2025-06-04 23:35:14] 2025-06-05 03:34:53,611 | INFO     | intersect: 180923188216.00867
[2025-06-04 23:35:14] 2025-06-05 03:34:53,612 | INFO     | chi2: 0.17747952014926643
[2025-06-04 23:35:14] 2025-06-05 03:34:53,612 | INFO     | -- intersect: 180923188216.00867
[2025-06-04 23:35:14] 2025-06-05 03:34:53,612 | INFO     | current memory leak: -103.44 B/s (using 68 data points, chi2=0.18)
[2025-06-04 23:35:14] 2025-06-05 03:34:53,612 | INFO     | ..............................
[2025-06-04 23:35:14] 2025-06-05 03:34:53,612 | INFO     | . Timing measurements:
[2025-06-04 23:35:14] 2025-06-05 03:34:53,612 | INFO     | . get job = 0 s
[2025-06-04 23:35:14] 2025-06-05 03:34:53,613 | INFO     | . initial setup = 2 s
[2025-06-04 23:35:14] 2025-06-05 03:34:53,613 | INFO     | . payload setup = 7 s
[2025-06-04 23:35:14] 2025-06-05 03:34:53,613 | INFO     | . stage-in = 0 s
[2025-06-04 23:35:14] 2025-06-05 03:34:53,613 | INFO     | . payload execution = 4548 s
[2025-06-04 23:35:14] 2025-06-05 03:34:53,613 | INFO     | . stage-out = 0 s
[2025-06-04 23:35:14] 2025-06-05 03:34:53,613 | INFO     | . log creation = 0 s
[2025-06-04 23:35:14] 2025-06-05 03:34:53,613 | INFO     | ..............................
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | 
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | job summary report
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | --------------------------------------------------
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | PanDA job id: 6668688824
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | task id: 44871837
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | errors: (none)
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | pilot state: finished 
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | transexitcode: 0
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | exeerrorcode: 0
[2025-06-04 23:35:14] 2025-06-05 03:34:53,708 | INFO     | exeerrordiag: 
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | exitcode: 0
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | exitmsg: OK
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | cpuconsumptiontime: 48592 s
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | nevents: 400
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | neventsw: 0
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | pid: 697709
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | pgrp: 697709
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | corecount: 12
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | event service: False
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | sizes: {0: 2397221, 1: 2397420, 5: 2397626, 11: 2397682, 4559: 2423626, 4560: 2432567, 4563: 2432751, 4567: 2432921}
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | --------------------------------------------------
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | 
[2025-06-04 23:35:14] 2025-06-05 03:34:53,709 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | job 6668688824 has completed (purged errors)
[2025-06-04 23:35:14] 2025-06-05 03:34:53,725 | INFO     | overall cleanup function is called
[2025-06-04 23:35:14] 2025-06-05 03:34:54,734 | INFO     | --- collectZombieJob: --- 10, [697709]
[2025-06-04 23:35:14] 2025-06-05 03:34:54,734 | INFO     | zombie collector waiting for pid 697709
[2025-06-04 23:35:14] 2025-06-05 03:34:54,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:35:14] 2025-06-05 03:34:54,734 | INFO     | collected zombie processes
[2025-06-04 23:35:14] 2025-06-05 03:34:54,734 | INFO     | will attempt to kill all subprocesses of pid=697709
[2025-06-04 23:35:14] 2025-06-05 03:34:54,954 | INFO     | process IDs to be killed: [697709] (in reverse order)
[2025-06-04 23:35:14] 2025-06-05 03:34:55,048 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:35:14] 2025-06-05 03:34:55,048 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:35:14] 2025-06-05 03:34:55,058 | INFO     | did not find any defunct processes belonging to 697709
[2025-06-04 23:35:14] 2025-06-05 03:34:55,067 | INFO     | did not find any defunct processes belonging to 697709
[2025-06-04 23:35:14] 2025-06-05 03:34:55,067 | INFO     | ready for new job
[2025-06-04 23:35:14] 2025-06-05 03:34:55,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:35:14] 2025-06-05 03:34:55,069 | INFO     | **************************************
[2025-06-04 23:35:14] 2025-06-05 03:34:55,069 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:35:14] 2025-06-05 03:34:55,069 | INFO     | **************************************
[2025-06-04 23:35:14] 2025-06-05 03:34:55,069 | INFO     | 
[2025-06-04 23:35:14] 2025-06-05 03:34:55,084 | INFO     | architecture information:
[2025-06-04 23:35:14] 2025-06-05 03:34:55,084 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:35:14] 2025-06-05 03:34:55,099 | INFO     | cat /etc/os-release:
[2025-06-04 23:35:14] NAME="CentOS Linux"
[2025-06-04 23:35:14] VERSION="7 (Core)"
[2025-06-04 23:35:14] ID="centos"
[2025-06-04 23:35:14] ID_LIKE="rhel fedora"
[2025-06-04 23:35:14] VERSION_ID="7"
[2025-06-04 23:35:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:35:14] ANSI_COLOR="0;31"
[2025-06-04 23:35:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:35:14] HOME_URL="https://www.centos.org/"
[2025-06-04 23:35:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:35:14] 
[2025-06-04 23:35:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:35:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:35:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:35:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:35:14] 
[2025-06-04 23:35:14] 2025-06-05 03:34:55,100 | INFO     | **************************************
[2025-06-04 23:35:14] 2025-06-05 03:34:55,603 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 23:35:14] 2025-06-05 03:34:55,621 | INFO     | sufficient remaining disk space (76483133440 B)
[2025-06-04 23:35:14] 2025-06-05 03:34:55,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:35:14] 2025-06-05 03:34:55,621 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:35:14] 2025-06-05 03:34:55,621 | INFO     | update_server=False
[2025-06-04 23:35:14] 2025-06-05 03:34:55,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:35:14] 2025-06-05 03:34:55,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:35:14] 2025-06-05 03:34:55,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:35:14] 2025-06-05 03:34:56,171 | INFO     | all data control threads have been joined
[2025-06-04 23:35:14] 2025-06-05 03:34:56,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:35:14] 2025-06-05 03:34:56,371 | INFO     | all payload control threads have been joined
[2025-06-04 23:35:14] 2025-06-05 03:34:56,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:35:14] 2025-06-05 03:34:56,524 | INFO     | aborting loop
[2025-06-04 23:35:14] 2025-06-05 03:34:56,626 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:56,627 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:56,666 | INFO     | PID=690588 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 23:35:14] 2025-06-05 03:34:56,666 | INFO     | .. there are 15 such processes running
[2025-06-04 23:35:14] 2025-06-05 03:34:56,666 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:35:14] 2025-06-05 03:34:56,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:35:14] 2025-06-05 03:34:56,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:35:14] 2025-06-05 03:34:56,794 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,096 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,121 | INFO     | all job control threads have been joined
[2025-06-04 23:35:14] 2025-06-05 03:34:57,177 | INFO     | [data] control thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,377 | INFO     | [payload] control thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,487 | INFO     | [job] validate thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,529 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,615 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,627 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,637 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,678 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:57,682 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:34:58,126 | INFO     | [job] control thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:35:00,223 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:35:06,613 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:35:14] 2025-06-05 03:35:07,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:35:14] 2025-06-05 03:35:08,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437935990592)>', '<ExcThread(monitor, started 140437293618944)>']
[2025-06-04 23:35:14] 2025-06-05 03:35:09,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:35:14] 2025-06-05 03:35:09,730 | INFO     | [monitor] control thread has ended
[2025-06-04 23:35:14] 2025-06-05 03:35:13,921 | INFO     | all workflow threads have been joined
[2025-06-04 23:35:14] 2025-06-05 03:35:13,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:35:14] 2025-06-05 03:35:13,922 | INFO     | traces error code: 0
[2025-06-04 23:35:14] 2025-06-05 03:35:13,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:35:14] 2025-06-05 03:35:14,070 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:35:14] 2025-06-05 03:35:14,072 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:35:14] 2025-06-05 03:35:14,075 [wrapper] pilotpid: 690588
[2025-06-04 23:35:14] 2025-06-05 03:35:14,077 [wrapper] Pilot exit status: 0
[2025-06-04 23:35:14] 2025-06-05 03:35:14,087 [wrapper] pandaids: 6668688824
[2025-06-04 23:35:14] 2025-06-05 03:35:14,142 [wrapper] cleanup supervisor_pilot  848269 690589
[2025-06-04 23:35:14] 2025-06-05 03:35:14,146 [wrapper] Test setup, not cleaning
[2025-06-04 23:35:14] 2025-06-05 03:35:14,148 [wrapper] apfmon messages muted
[2025-06-04 23:35:14] 2025-06-05 03:35:14,151 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:35:14] 2025-06-05 03:35:14,154 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:35:14]  *** Error codes and diagnostics ***
[2025-06-04 23:35:14]     "exeErrorCode": 0,
[2025-06-04 23:35:14]     "exeErrorDiag": "",
[2025-06-04 23:35:14]     "pilotErrorCode": 0,
[2025-06-04 23:35:14]     "pilotErrorDiag": "",
[2025-06-04 23:35:14]  *** Listing of results directory ***
[2025-06-04 23:35:14] total 415428
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas    495897 May 28 12:21 pilot3.tar.gz
[2025-06-04 23:35:14] -rwx------. 1 boincer umatlas     37140 May 28 12:36 runpilot2-wrapper.sh
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas      5111 May 28 12:36 queuedata.json
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas       100 Jun  4 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:35:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 22:18 run_atlas
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas       105 Jun  4 22:18 job.xml
[2025-06-04 23:35:14] -rw-r--r--. 2 boincer umatlas 221591245 Jun  4 22:18 EVNT.44871834._003393.pool.root.1
[2025-06-04 23:35:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:18 start_atlas.sh
[2025-06-04 23:35:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 22:18 shared
[2025-06-04 23:35:14] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 22:18 input.tar.gz
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas         0 Jun  4 22:18 boinc_lockfile
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 22:18 pandaJob.out
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas    987109 Jun  4 22:18 agis_schedconf.cvmfs.json
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas   1598969 Jun  4 22:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:35:14] drwx------. 4 boincer umatlas      4096 Jun  4 22:18 pilot3
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 23:27 init_data.xml
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas        95 Jun  4 23:34 pilot_heartbeat.json
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas       529 Jun  4 23:34 boinc_task_state.xml
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas 198315338 Jun  4 23:34 HITS.44871837._087123.pool.root.1
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas      1030 Jun  4 23:34 memory_monitor_summary.json
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas    380602 Jun  4 23:34 log.44871837._087123.job.log.tgz.1
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas      7721 Jun  4 23:34 heartbeat.json
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 23:35 boinc_mmap_file
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas        27 Jun  4 23:35 wrapper_checkpoint.txt
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas      4820 Jun  4 23:35 pilotlog.txt
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas    452454 Jun  4 23:35 log.44871837._087123.job.log.1
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas       357 Jun  4 23:35 output.list
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas       620 Jun  4 23:35 runtime_log
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas    849920 Jun  4 23:35 result.tar.gz
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 23:35 runtime_log.err
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas       655 Jun  4 23:35 8VMNDmQwYe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhlTKDmO9f1Bo.diag
[2025-06-04 23:35:14] -rw-r--r--. 1 boincer umatlas     21466 Jun  4 23:35 stderr.txt
[2025-06-04 23:35:14] HITS file was successfully produced:
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas 198315338 Jun  4 23:34 shared/HITS.pool.root.1
[2025-06-04 23:35:14]  *** Contents of shared directory: ***
[2025-06-04 23:35:14] total 411420
[2025-06-04 23:35:14] -rw-r--r--. 2 boincer umatlas 221591245 Jun  4 22:18 ATLAS.root_0
[2025-06-04 23:35:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 22:18 start_atlas.sh
[2025-06-04 23:35:14] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 22:18 input.tar.gz
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas 198315338 Jun  4 23:34 HITS.pool.root.1
[2025-06-04 23:35:14] -rw-------. 1 boincer umatlas    849920 Jun  4 23:35 result.tar.gz
23:35:15 (686356): run_atlas exited; CPU time 48612.006493
23:35:15 (686356): called boinc_finish(0)

</stderr_txt>
]]>

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