Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:54:58 (1337702): wrapper (7.7.26015): starting
20:54:58 (1337702): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:54:58] Arguments: --nthreads 8
[2025-06-04 20:54:58] Threads: 8
[2025-06-04 20:54:58] Checking for CVMFS
[2025-06-04 20:54:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:54:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:54:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:54:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:54:58] 2.12.6.0 8999 38052 511192 146799 3 468 30217234 32935936 14453 16776704 1 166252829 99.595 182061526 25478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 20:54:58] CVMFS is ok
[2025-06-04 20:54:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:54:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:54:58] Further information can be found at the LHC@home message board.
[2025-06-04 20:54:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:54:58] Checking for apptainer binary...
[2025-06-04 20:54:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:54:58] Running /usr/bin/apptainer --version
[2025-06-04 20:54:58] apptainer version 1.4.1-1.el9
[2025-06-04 20:54:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:54:58] c7-11-16.aglt2.org
[2025-06-04 20:54:58] apptainer works
[2025-06-04 20:54:58] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:54:58] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:54:58] Starting ATLAS job with PandaID=6668232166
[2025-06-04 20:54:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:30:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:30:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 22:30:56]  is_altstaged=None
[2025-06-04 22:30:56]  is_tar=False
[2025-06-04 22:30:56]  lfn=log.44871837._081310.job.log.tgz.1
[2025-06-04 22:30:56]  mtime=0
[2025-06-04 22:30:56]  protocol_id=None
[2025-06-04 22:30:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 22:30:56]  replicas=None
[2025-06-04 22:30:56]  scope=mc23_13p6TeV
[2025-06-04 22:30:56]  status=None
[2025-06-04 22:30:56]  status_code=0
[2025-06-04 22:30:56]  storage_token=
[2025-06-04 22:30:56]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6668232166/log.44871837._081310.job.log.tgz.1
[2025-06-04 22:30:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/75/log.44871837._081310.job.log.tgz.1
[2025-06-04 22:30:56]  workdir=None
[2025-06-04 22:30:56] ]
[2025-06-04 22:30:56] 2025-06-05 02:30:03,323 | INFO     | transferring file log.44871837._081310.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668232166/log.44871837._081310.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 22:30:56] 2025-06-05 02:30:03,324 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668232166/log.44871837._081310.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._081310.job
[2025-06-04 22:30:56] 2025-06-05 02:30:03,345 | INFO     | adding to output.list: log.44871837._081310.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/75/log.44871837._081310.job.log.tg
[2025-06-04 22:30:56] 2025-06-05 02:30:03,346 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 22:30:56] 2025-06-05 02:30:03,346 | INFO     | summary of transferred files:
[2025-06-04 22:30:56] 2025-06-05 02:30:03,346 | INFO     |  -- lfn=log.44871837._081310.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 22:30:56] 2025-06-05 02:30:03,346 | INFO     | stage-out finished correctly
[2025-06-04 22:30:56] 2025-06-05 02:30:04,155 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 22:30:56] 2025-06-05 02:30:04,528 | INFO     | job 6668232166 has state=finished
[2025-06-04 22:30:56] 2025-06-05 02:30:04,529 | INFO     | preparing for final server update for job 6668232166 in state='finished'
[2025-06-04 22:30:56] 2025-06-05 02:30:04,529 | INFO     | this job has now completed (state=finished)
[2025-06-04 22:30:56] 2025-06-05 02:30:04,529 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 22:30:56] 2025-06-05 02:30:04,529 | INFO     | log transfer has been attempted: DONE
[2025-06-04 22:30:56] 2025-06-05 02:30:04,529 | INFO     | job 6668232166 has finished - writing final server update
[2025-06-04 22:30:56] 2025-06-05 02:30:04,530 | INFO     | total number of processed events: 400 (read)
[2025-06-04 22:30:56] 2025-06-05 02:30:04,547 | INFO     | executing command: lscpu
[2025-06-04 22:30:56] 2025-06-05 02:30:04,625 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 22:30:56] 2025-06-05 02:30:08,601 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 22:30:56] 2025-06-05 02:30:08,601 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668232166/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:30:56] 2025-06-05 02:30:08,602 | INFO     | extracted standard info from prmon json
[2025-06-04 22:30:56] 2025-06-05 02:30:08,602 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:30:56] 2025-06-05 02:30:08,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:30:56] 2025-06-05 02:30:08,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:30:56] 2025-06-05 02:30:08,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:30:56] 2025-06-05 02:30:08,605 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:30:56] 2025-06-05 02:30:08,605 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 22:30:56] 2025-06-05 02:30:08,605 | INFO     | sum of deviations: -4883788496.500001
[2025-06-04 22:30:56] 2025-06-05 02:30:08,605 | INFO     | mean x: 1749087832.5
[2025-06-04 22:30:56] 2025-06-05 02:30:08,606 | INFO     | mean y: 2202581.988372093
[2025-06-04 22:30:56] 2025-06-05 02:30:08,606 | INFO     | -- intersect: 43318708022.925255
[2025-06-04 22:30:56] 2025-06-05 02:30:08,606 | INFO     | intersect: 43318708022.925255
[2025-06-04 22:30:56] 2025-06-05 02:30:08,606 | INFO     | chi2: 0.0729574709150868
[2025-06-04 22:30:56] 2025-06-05 02:30:08,606 | INFO     | -- intersect: 43318708022.925255
[2025-06-04 22:30:56] 2025-06-05 02:30:08,606 | INFO     | current memory leak: -24.77 B/s (using 86 data points, chi2=0.07)
[2025-06-04 22:30:56] 2025-06-05 02:30:08,607 | INFO     | ..............................
[2025-06-04 22:30:56] 2025-06-05 02:30:08,607 | INFO     | . Timing measurements:
[2025-06-04 22:30:56] 2025-06-05 02:30:08,607 | INFO     | . get job = 0 s
[2025-06-04 22:30:56] 2025-06-05 02:30:08,607 | INFO     | . initial setup = 2 s
[2025-06-04 22:30:56] 2025-06-05 02:30:08,607 | INFO     | . payload setup = 6 s
[2025-06-04 22:30:56] 2025-06-05 02:30:08,607 | INFO     | . stage-in = 0 s
[2025-06-04 22:30:56] 2025-06-05 02:30:08,607 | INFO     | . payload execution = 5669 s
[2025-06-04 22:30:56] 2025-06-05 02:30:08,607 | INFO     | . stage-out = 0 s
[2025-06-04 22:30:56] 2025-06-05 02:30:08,608 | INFO     | . log creation = 0 s
[2025-06-04 22:30:56] 2025-06-05 02:30:08,608 | INFO     | ..............................
[2025-06-04 22:30:56] 2025-06-05 02:30:08,686 | INFO     | 
[2025-06-04 22:30:56] 2025-06-05 02:30:08,686 | INFO     | job summary report
[2025-06-04 22:30:56] 2025-06-05 02:30:08,686 | INFO     | --------------------------------------------------
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | PanDA job id: 6668232166
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | task id: 44871837
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | errors: (none)
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | pilot state: finished 
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | transexitcode: 0
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | exeerrorcode: 0
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | exeerrordiag: 
[2025-06-04 22:30:56] 2025-06-05 02:30:08,687 | INFO     | exitcode: 0
[2025-06-04 22:30:56] 2025-06-05 02:30:08,688 | INFO     | exitmsg: OK
[2025-06-04 22:30:56] 2025-06-05 02:30:08,688 | INFO     | cpuconsumptiontime: 42089 s
[2025-06-04 22:30:56] 2025-06-05 02:30:08,688 | INFO     | nevents: 400
[2025-06-04 22:30:56] 2025-06-05 02:30:08,688 | INFO     | neventsw: 0
[2025-06-04 22:30:56] 2025-06-05 02:30:08,688 | INFO     | pid: 1359848
[2025-06-04 22:30:56] 2025-06-05 02:30:08,688 | INFO     | pgrp: 1359848
[2025-06-04 22:30:56] 2025-06-05 02:30:08,688 | INFO     | corecount: 8
[2025-06-04 22:30:56] 2025-06-05 02:30:08,688 | INFO     | event service: False
[2025-06-04 22:30:56] 2025-06-05 02:30:08,689 | INFO     | sizes: {0: 2397392, 5: 2397598, 11: 2397654, 5679: 2433205, 5680: 2433205, 5685: 2433375}
[2025-06-04 22:30:56] 2025-06-05 02:30:08,689 | INFO     | --------------------------------------------------
[2025-06-04 22:30:56] 2025-06-05 02:30:08,689 | INFO     | 
[2025-06-04 22:30:56] 2025-06-05 02:30:08,689 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 22:30:56] 2025-06-05 02:30:08,714 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:30:56] 2025-06-05 02:30:08,716 | INFO     | job 6668232166 has completed (purged errors)
[2025-06-04 22:30:56] 2025-06-05 02:30:08,717 | INFO     | overall cleanup function is called
[2025-06-04 22:30:56] 2025-06-05 02:30:08,911 | WARNING  | process 1359848 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 22:30:56] 2025-06-05 02:30:09,207 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 22:30:56] 2025-06-05 02:30:09,449 | INFO     | number of running child processes to parent process 1359848: 1
[2025-06-04 22:30:56] 2025-06-05 02:30:09,449 | INFO     | maximum number of monitored processes: 6
[2025-06-04 22:30:56] 2025-06-05 02:30:09,449 | INFO     | aborting job monitoring since job object (job id=6668232166) has expired
[2025-06-04 22:30:56] 2025-06-05 02:30:09,725 | INFO     | --- collectZombieJob: --- 10, [1359848]
[2025-06-04 22:30:56] 2025-06-05 02:30:09,725 | INFO     | zombie collector waiting for pid 1359848
[2025-06-04 22:30:56] 2025-06-05 02:30:09,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:30:56] 2025-06-05 02:30:09,725 | INFO     | collected zombie processes
[2025-06-04 22:30:56] 2025-06-05 02:30:09,725 | INFO     | will attempt to kill all subprocesses of pid=1359848
[2025-06-04 22:30:56] 2025-06-05 02:30:09,988 | INFO     | process IDs to be killed: [1359848] (in reverse order)
[2025-06-04 22:30:56] 2025-06-05 02:30:10,097 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:30:56] 2025-06-05 02:30:10,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:30:56] 2025-06-05 02:30:10,110 | INFO     | did not find any defunct processes belonging to 1359848
[2025-06-04 22:30:56] 2025-06-05 02:30:10,122 | INFO     | did not find any defunct processes belonging to 1359848
[2025-06-04 22:30:56] 2025-06-05 02:30:10,122 | INFO     | ready for new job
[2025-06-04 22:30:56] 2025-06-05 02:30:10,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:30:56] 2025-06-05 02:30:10,124 | INFO     | **************************************
[2025-06-04 22:30:56] 2025-06-05 02:30:10,124 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:30:56] 2025-06-05 02:30:10,124 | INFO     | **************************************
[2025-06-04 22:30:56] 2025-06-05 02:30:10,124 | INFO     | 
[2025-06-04 22:30:56] 2025-06-05 02:30:10,139 | INFO     | architecture information:
[2025-06-04 22:30:56] 2025-06-05 02:30:10,140 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:30:56] 2025-06-05 02:30:10,158 | INFO     | cat /etc/os-release:
[2025-06-04 22:30:56] NAME="CentOS Linux"
[2025-06-04 22:30:56] VERSION="7 (Core)"
[2025-06-04 22:30:56] ID="centos"
[2025-06-04 22:30:56] ID_LIKE="rhel fedora"
[2025-06-04 22:30:56] VERSION_ID="7"
[2025-06-04 22:30:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:30:56] ANSI_COLOR="0;31"
[2025-06-04 22:30:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:30:56] HOME_URL="https://www.centos.org/"
[2025-06-04 22:30:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:30:56] 
[2025-06-04 22:30:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:30:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:30:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:30:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:30:56] 
[2025-06-04 22:30:56] 2025-06-05 02:30:10,159 | INFO     | **************************************
[2025-06-04 22:30:56] 2025-06-05 02:30:10,661 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 22:30:56] 2025-06-05 02:30:10,681 | INFO     | sufficient remaining disk space (96233062400 B)
[2025-06-04 22:30:56] 2025-06-05 02:30:10,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:30:56] 2025-06-05 02:30:10,681 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:30:56] 2025-06-05 02:30:10,681 | INFO     | update_server=False
[2025-06-04 22:30:56] 2025-06-05 02:30:10,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:30:56] 2025-06-05 02:30:10,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:30:56] 2025-06-05 02:30:10,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:30:56] 2025-06-05 02:30:10,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:30:56] 2025-06-05 02:30:10,682 | INFO     | aborting loop
[2025-06-04 22:30:56] 2025-06-05 02:30:10,802 | INFO     | all job control threads have been joined
[2025-06-04 22:30:56] 2025-06-05 02:30:10,867 | INFO     | PID=1341580 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 22:30:56] 2025-06-05 02:30:10,867 | INFO     | .. there are 21 such processes running
[2025-06-04 22:30:56] 2025-06-05 02:30:10,867 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:30:56] 2025-06-05 02:30:10,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:30:56] 2025-06-05 02:30:10,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:30:56] 2025-06-05 02:30:11,327 | INFO     | all payload control threads have been joined
[2025-06-04 22:30:56] 2025-06-05 02:30:11,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:30:56] 2025-06-05 02:30:11,686 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:11,687 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:11,687 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:11,716 | INFO     | all data control threads have been joined
[2025-06-04 22:30:56] 2025-06-05 02:30:11,736 | INFO     | [job] validate thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:11,787 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:11,807 | INFO     | [job] control thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:11,822 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:12,332 | INFO     | [payload] control thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:12,571 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:12,721 | INFO     | [data] control thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:12,734 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:12,819 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:12,888 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:13,436 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:14,688 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:20,989 | INFO     | job.realtimelogging is not enabled
[2025-06-04 22:30:56] 2025-06-05 02:30:21,995 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:30:56] 2025-06-05 02:30:23,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380541105984)>', '<ExcThread(monitor, started 140380016187136)>']
[2025-06-04 22:30:56] 2025-06-05 02:30:23,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:30:56] 2025-06-05 02:30:23,933 | INFO     | [monitor] control thread has ended
[2025-06-04 22:30:56] 2025-06-05 02:30:28,484 | INFO     | all workflow threads have been joined
[2025-06-04 22:30:56] 2025-06-05 02:30:28,484 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:30:56] 2025-06-05 02:30:28,485 | INFO     | traces error code: 0
[2025-06-04 22:30:56] 2025-06-05 02:30:28,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:30:56] 2025-06-05 02:30:28,620 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:30:56] 2025-06-05 02:30:28,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:30:56] 2025-06-05 02:30:28,627 [wrapper] pilotpid: 1341580
[2025-06-04 22:30:56] 2025-06-05 02:30:28,629 [wrapper] Pilot exit status: 0
[2025-06-04 22:30:56] 2025-06-05 02:30:28,640 [wrapper] pandaids: 6668232166
[2025-06-04 22:30:56] 2025-06-05 02:30:28,726 [wrapper] cleanup supervisor_pilot 1672014 1341581
[2025-06-04 22:30:56] 2025-06-05 02:30:28,730 [wrapper] Test setup, not cleaning
[2025-06-04 22:30:56] 2025-06-05 02:30:28,733 [wrapper] apfmon messages muted
[2025-06-04 22:30:56] 2025-06-05 02:30:28,736 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:30:56] 2025-06-05 02:30:28,739 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:30:56]  *** Error codes and diagnostics ***
[2025-06-04 22:30:56]     "exeErrorCode": 0,
[2025-06-04 22:30:56]     "exeErrorDiag": "",
[2025-06-04 22:30:56]     "pilotErrorCode": 0,
[2025-06-04 22:30:56]     "pilotErrorDiag": "",
[2025-06-04 22:30:56]  *** Listing of results directory ***
[2025-06-04 22:30:56] total 423096
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas    495897 May 28 04:16 pilot3.tar.gz
[2025-06-04 22:30:56] -rwx------. 1 boincer umatlas     37140 May 28 04:19 runpilot2-wrapper.sh
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas      5111 May 28 04:19 queuedata.json
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas       100 Jun  4 20:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:30:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 20:54 run_atlas
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas       105 Jun  4 20:54 job.xml
[2025-06-04 22:30:56] -rw-r--r--. 2 boincer umatlas 228007366 Jun  4 20:54 EVNT.44871834._003175.pool.root.1
[2025-06-04 22:30:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 20:54 start_atlas.sh
[2025-06-04 22:30:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 20:54 shared
[2025-06-04 22:30:56] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 20:54 input.tar.gz
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas         0 Jun  4 20:54 boinc_lockfile
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 20:54 pandaJob.out
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas    987117 Jun  4 20:55 agis_schedconf.cvmfs.json
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas   1598969 Jun  4 20:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:30:56] drwx------. 4 boincer umatlas      4096 Jun  4 20:55 pilot3
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas      6898 Jun  4 22:29 init_data.xml
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas        95 Jun  4 22:29 pilot_heartbeat.json
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas       530 Jun  4 22:29 boinc_task_state.xml
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas 199693250 Jun  4 22:29 HITS.44871837._081310.pool.root.1
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas      1026 Jun  4 22:29 memory_monitor_summary.json
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas    308861 Jun  4 22:30 log.44871837._081310.job.log.tgz.1
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas      7685 Jun  4 22:30 heartbeat.json
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas      4821 Jun  4 22:30 pilotlog.txt
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas    550933 Jun  4 22:30 log.44871837._081310.job.log.1
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas       357 Jun  4 22:30 output.list
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas       620 Jun  4 22:30 runtime_log
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas    880640 Jun  4 22:30 result.tar.gz
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas       652 Jun  4 22:30 ShfLDmgBRe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQCTKDmbDsZFo.diag
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 22:30 runtime_log.err
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas        27 Jun  4 22:30 wrapper_checkpoint.txt
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 22:30 boinc_mmap_file
[2025-06-04 22:30:56] -rw-r--r--. 1 boincer umatlas     21385 Jun  4 22:30 stderr.txt
[2025-06-04 22:30:56] HITS file was successfully produced:
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas 199693250 Jun  4 22:29 shared/HITS.pool.root.1
[2025-06-04 22:30:56]  *** Contents of shared directory: ***
[2025-06-04 22:30:56] total 419060
[2025-06-04 22:30:56] -rw-r--r--. 2 boincer umatlas 228007366 Jun  4 20:54 ATLAS.root_0
[2025-06-04 22:30:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 20:54 start_atlas.sh
[2025-06-04 22:30:56] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 20:54 input.tar.gz
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas 199693250 Jun  4 22:29 HITS.pool.root.1
[2025-06-04 22:30:56] -rw-------. 1 boincer umatlas    880640 Jun  4 22:30 result.tar.gz
22:30:58 (1337702): run_atlas exited; CPU time 42159.647917
22:30:58 (1337702): called boinc_finish(0)

</stderr_txt>
]]>

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