Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:34:36 (518): wrapper (7.7.26015): starting
08:34:36 (518): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 08:34:36] Arguments: --nthreads 8
[2025-06-05 08:34:36] Threads: 8
[2025-06-05 08:34:36] Checking for CVMFS
[2025-06-05 08:34:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 08:34:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 08:34:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 08:34:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 08:34:39] 2.11.2.0 26354 34294 94032 146809 1 16 16379414 25165825 4303 130560 0 17559161 99.831 20007571 2165 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 08:34:39] CVMFS is ok
[2025-06-05 08:34:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:34:39] Checking for apptainer binary...
[2025-06-05 08:34:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 08:34:39] Running /usr/bin/apptainer --version
[2025-06-05 08:34:39] apptainer version 1.3.2-1.el7
[2025-06-05 08:34:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:34:52] cg-vwn294.simple-grid.lan
[2025-06-05 08:34:52] apptainer works
[2025-06-05 09:05:14] Set ATHENA_PROC_NUMBER=8
[2025-06-05 09:05:14] Set ATHENA_CORE_NUMBER=8
[2025-06-05 09:05:14] Starting ATLAS job with PandaID=6679486012
[2025-06-05 09:05:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:11:18]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:11:18] 2025-06-05 10:47:38,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:11:18] 2025-06-05 10:47:38,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:11:18] 2025-06-05 10:47:38,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:11:18] 2025-06-05 10:47:38,372 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:11:18] 2025-06-05 10:47:38,373 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,380 | INFO     | sum of deviations: 58222196213.0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,380 | INFO     | mean x: 1749114059.0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,380 | INFO     | mean y: 2453749.072463768
[2025-06-05 13:11:18] 2025-06-05 10:47:38,380 | INFO     | -- intersect: -37025301920.05438
[2025-06-05 13:11:18] 2025-06-05 10:47:38,381 | INFO     | intersect: -37025301920.05438
[2025-06-05 13:11:18] 2025-06-05 10:47:38,381 | INFO     | chi2: 8.390833375880776
[2025-06-05 13:11:18] 2025-06-05 10:47:38,381 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 13:11:18] 2025-06-05 10:47:38,383 | INFO     | sum of deviations: 70787133562.49998
[2025-06-05 13:11:18] 2025-06-05 10:47:38,383 | INFO     | mean x: 1749113906.5
[2025-06-05 13:11:18] 2025-06-05 10:47:38,383 | INFO     | mean y: 2463389.886138614
[2025-06-05 13:11:18] 2025-06-05 10:47:38,384 | INFO     | -- intersect: -48442711760.907814
[2025-06-05 13:11:18] 2025-06-05 10:47:38,384 | INFO     | intersect: -48442711760.907814
[2025-06-05 13:11:18] 2025-06-05 10:47:38,384 | INFO     | chi2: 7.7164363289027404
[2025-06-05 13:11:18] 2025-06-05 10:47:38,384 | INFO     | current chi2=7.7164363289027404 (change=8.037307103684977 %)
[2025-06-05 13:11:18] 2025-06-05 10:47:38,384 | INFO     | right removable region: 201
[2025-06-05 13:11:18] 2025-06-05 10:47:38,385 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 13:11:18] 2025-06-05 10:47:38,386 | INFO     | sum of deviations: -16042020919.500011
[2025-06-05 13:11:18] 2025-06-05 10:47:38,387 | INFO     | mean x: 1749114211.5
[2025-06-05 13:11:18] 2025-06-05 10:47:38,387 | INFO     | mean y: 2511948.707920792
[2025-06-05 13:11:18] 2025-06-05 10:47:38,387 | INFO     | -- intersect: 10981324193.562374
[2025-06-05 13:11:18] 2025-06-05 10:47:38,387 | INFO     | intersect: 10981324193.562374
[2025-06-05 13:11:18] 2025-06-05 10:47:38,387 | INFO     | chi2: 3.0320496537664106
[2025-06-05 13:11:18] 2025-06-05 10:47:38,387 | INFO     | current chi2=3.0320496537664106 (change=63.86473764951697 %)
[2025-06-05 13:11:18] 2025-06-05 10:47:38,388 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,389 | INFO     | sum of deviations: -60235812007.99999
[2025-06-05 13:11:18] 2025-06-05 10:47:38,390 | INFO     | mean x: 1749114364.0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,390 | INFO     | mean y: 2548180.883248731
[2025-06-05 13:11:18] 2025-06-05 10:47:38,390 | INFO     | -- intersect: 44445926476.73384
[2025-06-05 13:11:18] 2025-06-05 10:47:38,390 | INFO     | intersect: 44445926476.73384
[2025-06-05 13:11:18] 2025-06-05 10:47:38,390 | INFO     | chi2: 1.0257146227232001
[2025-06-05 13:11:18] 2025-06-05 10:47:38,391 | INFO     | current chi2=1.0257146227232001 (change=66.17091605181803 %)
[2025-06-05 13:11:18] 2025-06-05 10:47:38,391 | INFO     | sum of square deviations: 2194675568.0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,392 | INFO     | sum of deviations: -62747874022.49998
[2025-06-05 13:11:18] 2025-06-05 10:47:38,401 | INFO     | mean x: 1749114516.5
[2025-06-05 13:11:18] 2025-06-05 10:47:38,401 | INFO     | mean y: 2550287.6927083335
[2025-06-05 13:11:18] 2025-06-05 10:47:38,402 | INFO     | -- intersect: 50011407602.43726
[2025-06-05 13:11:18] 2025-06-05 10:47:38,402 | INFO     | intersect: 50011407602.43726
[2025-06-05 13:11:18] 2025-06-05 10:47:38,402 | INFO     | chi2: 0.9658911530391144
[2025-06-05 13:11:18] 2025-06-05 10:47:38,402 | INFO     | current chi2=0.9658911530391144 (change=5.8323697799353384 %)
[2025-06-05 13:11:18] 2025-06-05 10:47:38,402 | INFO     | left removable region: 30
[2025-06-05 13:11:18] 2025-06-05 10:47:38,403 | INFO     | sum of square deviations: 1550429070.0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,404 | INFO     | sum of deviations: -32648708103.000004
[2025-06-05 13:11:18] 2025-06-05 10:47:38,404 | INFO     | mean x: 1749114791.0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,404 | INFO     | mean y: 2547788.871345029
[2025-06-05 13:11:18] 2025-06-05 10:47:38,404 | INFO     | -- intersect: 36835150682.468315
[2025-06-05 13:11:18] 2025-06-05 10:47:38,404 | INFO     | intersect: 36835150682.468315
[2025-06-05 13:11:18] 2025-06-05 10:47:38,405 | INFO     | chi2: 0.16480273142999405
[2025-06-05 13:11:18] 2025-06-05 10:47:38,405 | INFO     | -- intersect: 36835150682.468315
[2025-06-05 13:11:18] 2025-06-05 10:47:38,405 | INFO     | current memory leak: -21.06 B/s (using 171 data points, chi2=0.16)
[2025-06-05 13:11:18] 2025-06-05 10:47:38,406 | INFO     | ..............................
[2025-06-05 13:11:18] 2025-06-05 10:47:38,406 | INFO     | . Timing measurements:
[2025-06-05 13:11:18] 2025-06-05 10:47:38,406 | INFO     | . get job = 0 s
[2025-06-05 13:11:18] 2025-06-05 10:47:38,406 | INFO     | . initial setup = 8 s
[2025-06-05 13:11:18] 2025-06-05 10:47:38,406 | INFO     | . payload setup = 155 s
[2025-06-05 13:11:18] 2025-06-05 10:47:38,406 | INFO     | . stage-in = 0 s
[2025-06-05 13:11:18] 2025-06-05 10:47:38,406 | INFO     | . payload execution = 12721 s
[2025-06-05 13:11:18] 2025-06-05 10:47:38,407 | INFO     | . stage-out = 4 s
[2025-06-05 13:11:18] 2025-06-05 10:47:38,407 | INFO     | . log creation = 1 s
[2025-06-05 13:11:18] 2025-06-05 10:47:38,407 | INFO     | ..............................
[2025-06-05 13:11:18] 2025-06-05 10:47:38,569 | INFO     | 
[2025-06-05 13:11:18] 2025-06-05 10:47:38,569 | INFO     | job summary report
[2025-06-05 13:11:18] 2025-06-05 10:47:38,569 | INFO     | --------------------------------------------------
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | PanDA job id: 6679486012
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | task id: 45006595
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | errors: (none)
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | pilot state: finished 
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | transexitcode: 0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | exeerrorcode: 0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | exeerrordiag: 
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | exitcode: 0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,570 | INFO     | exitmsg: OK
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | cpuconsumptiontime: 47098 s
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | nevents: 400
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | neventsw: 0
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | pid: 30585
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | pgrp: 30585
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | corecount: 8
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | event service: False
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | sizes: {0: 2396464, 1: 2397149, 2: 2397320, 12: 2397348, 23: 2397376, 34: 2397404, 45: 2397560, 55: 2397588, 66: 2397616, 77: 2397644, 87: 2397906, 88: 2398214, 12
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | --------------------------------------------------
[2025-06-05 13:11:18] 2025-06-05 10:47:38,571 | INFO     | 
[2025-06-05 13:11:18] 2025-06-05 10:47:38,572 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-05 13:11:18] 2025-06-05 10:47:38,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,838 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:11:18] 2025-06-05 10:47:38,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:11:18] 2025-06-05 10:47:38,839 | INFO     | job 6679486012 has completed (purged errors)
[2025-06-05 13:11:18] 2025-06-05 10:47:38,839 | INFO     | overall cleanup function is called
[2025-06-05 13:11:18] 2025-06-05 10:47:39,032 | INFO     | PID=21936 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 13:11:18] 2025-06-05 10:47:39,032 | INFO     | .. there are 9 such processes running
[2025-06-05 13:11:18] 2025-06-05 10:47:39,848 | INFO     | --- collectZombieJob: --- 10, [30585]
[2025-06-05 13:11:18] 2025-06-05 10:47:39,848 | INFO     | zombie collector waiting for pid 30585
[2025-06-05 13:11:18] 2025-06-05 10:47:39,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:11:18] 2025-06-05 10:47:39,849 | INFO     | collected zombie processes
[2025-06-05 13:11:18] 2025-06-05 10:47:39,849 | INFO     | will attempt to kill all subprocesses of pid=30585
[2025-06-05 13:11:18] 2025-06-05 10:47:39,985 | INFO     | process IDs to be killed: [30585] (in reverse order)
[2025-06-05 13:11:18] 2025-06-05 10:47:40,832 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:11:18] 2025-06-05 10:47:40,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:11:18] 2025-06-05 10:47:40,836 | INFO     | did not find any defunct processes belonging to 30585
[2025-06-05 13:11:18] 2025-06-05 10:47:40,840 | INFO     | did not find any defunct processes belonging to 30585
[2025-06-05 13:11:18] 2025-06-05 10:47:40,840 | INFO     | ready for new job
[2025-06-05 13:11:18] 2025-06-05 10:47:40,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:11:18] 2025-06-05 10:47:40,846 | INFO     | **************************************
[2025-06-05 13:11:18] 2025-06-05 10:47:40,847 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:11:18] 2025-06-05 10:47:40,847 | INFO     | **************************************
[2025-06-05 13:11:18] 2025-06-05 10:47:40,847 | INFO     | 
[2025-06-05 13:11:18] 2025-06-05 10:47:40,848 | INFO     | pilot is running in a VM
[2025-06-05 13:11:18] 2025-06-05 10:47:40,848 | INFO     | architecture information:
[2025-06-05 13:11:18] 2025-06-05 10:47:40,862 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:11:18] 2025-06-05 10:47:41,041 | INFO     | cat /etc/os-release:
[2025-06-05 13:11:18] NAME="CentOS Linux"
[2025-06-05 13:11:18] VERSION="7 (Core)"
[2025-06-05 13:11:18] ID="centos"
[2025-06-05 13:11:18] ID_LIKE="rhel fedora"
[2025-06-05 13:11:18] VERSION_ID="7"
[2025-06-05 13:11:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:11:18] ANSI_COLOR="0;31"
[2025-06-05 13:11:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:11:18] HOME_URL="https://www.centos.org/"
[2025-06-05 13:11:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:11:18] 
[2025-06-05 13:11:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:11:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:11:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:11:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:11:18] 
[2025-06-05 13:11:18] 2025-06-05 10:47:41,042 | INFO     | **************************************
[2025-06-05 13:11:18] 2025-06-05 10:47:41,547 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-05 13:11:18] 2025-06-05 10:47:41,646 | INFO     | sufficient remaining disk space (496586719232 B)
[2025-06-05 13:11:18] 2025-06-05 10:47:41,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:11:18] 2025-06-05 10:47:41,646 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:11:18] 2025-06-05 10:47:41,646 | INFO     | update_server=False
[2025-06-05 13:11:18] 2025-06-05 10:47:41,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:11:18] 2025-06-05 10:47:41,647 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:11:18] 2025-06-05 10:47:41,647 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:11:18] 2025-06-05 10:47:41,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:11:18] 2025-06-05 10:47:41,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:11:18] 2025-06-05 10:47:41,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:11:18] 2025-06-05 10:47:41,648 | INFO     | aborting loop
[2025-06-05 13:11:18] 2025-06-05 10:47:41,718 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:11:18] 2025-06-05 10:47:41,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:11:18] 2025-06-05 10:47:42,272 | INFO     | all data control threads have been joined
[2025-06-05 13:11:18] 2025-06-05 10:47:42,525 | INFO     | all job control threads have been joined
[2025-06-05 13:11:18] 2025-06-05 10:47:42,652 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:42,654 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:42,781 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:42,857 | INFO     | all payload control threads have been joined
[2025-06-05 13:11:18] 2025-06-05 10:47:43,015 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,107 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,227 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,278 | INFO     | [data] control thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,337 | INFO     | [job] validate thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,531 | INFO     | [job] control thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:11:18] 2025-06-05 10:47:43,607 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,608 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,725 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:43,863 | INFO     | [payload] control thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:44,588 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:45,880 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:11:18] 2025-06-05 10:47:47,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122750711616)>', '<ExcThread(monitor, started 140122091677440)>']
[2025-06-05 13:11:18] 2025-06-05 10:47:48,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:11:18] 2025-06-05 10:47:48,688 | INFO     | [monitor] control thread has ended
[2025-06-05 13:11:18] 2025-06-05 10:47:52,855 | INFO     | all workflow threads have been joined
[2025-06-05 13:11:18] 2025-06-05 10:47:52,855 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:11:18] 2025-06-05 10:47:52,856 | INFO     | traces error code: 0
[2025-06-05 13:11:18] 2025-06-05 10:47:52,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:11:18] 2025-06-05 10:47:53,212 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:11:18] 2025-06-05 10:47:53,300 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:11:18] 2025-06-05 10:47:53,385 [wrapper] pilotpid: 21936
[2025-06-05 13:11:18] 2025-06-05 10:47:53,432 [wrapper] Pilot exit status: 0
[2025-06-05 13:11:18] 2025-06-05 10:47:53,920 [wrapper] pandaids: 6679486012
[2025-06-05 13:11:18] 2025-06-05 10:47:54,598 [wrapper] cleanup supervisor_pilot 29066 21937
[2025-06-05 13:11:18] 2025-06-05 10:47:54,679 [wrapper] Test setup, not cleaning
[2025-06-05 13:11:18] 2025-06-05 10:47:54,778 [wrapper] apfmon messages muted
[2025-06-05 13:11:18] 2025-06-05 10:47:54,874 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:11:18] 2025-06-05 10:47:54,921 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:11:18]  *** Error codes and diagnostics ***
[2025-06-05 13:11:18]     "exeErrorCode": 0,
[2025-06-05 13:11:18]     "exeErrorDiag": "",
[2025-06-05 13:11:18]     "pilotErrorCode": 0,
[2025-06-05 13:11:18]     "pilotErrorDiag": "",
[2025-06-05 13:11:18]  *** Listing of results directory ***
[2025-06-05 13:11:18] total 384368
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc    495897 Jun  4 11:04 pilot3.tar.gz
[2025-06-05 13:11:18] -rwx------. 1 boinc boinc     37140 Jun  4 11:08 runpilot2-wrapper.sh
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc      5111 Jun  4 11:08 queuedata.json
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc       100 Jun  5 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:11:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 08:34 run_atlas
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc       105 Jun  5 08:34 job.xml
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc      6391 Jun  5 08:34 init_data.xml
[2025-06-05 13:11:18] -rw-r--r--. 2 boinc boinc 213003938 Jun  5 08:34 EVNT.45006593._001564.pool.root.1
[2025-06-05 13:11:18] -rw-r--r--. 2 boinc boinc     15093 Jun  5 08:34 start_atlas.sh
[2025-06-05 13:11:18] drwxrwx--x. 2 boinc boinc        68 Jun  5 08:34 shared
[2025-06-05 13:11:18] -rw-r--r--. 2 boinc boinc    508874 Jun  5 08:34 input.tar.gz
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc         0 Jun  5 08:34 boinc_lockfile
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc      2525 Jun  5 08:34 pandaJob.out
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc    986926 Jun  5 09:08 agis_schedconf.cvmfs.json
[2025-06-05 13:11:18] drwx------. 4 boinc boinc      4096 Jun  5 09:08 pilot3
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc 173779721 Jun  5 12:44 HITS.45006595._056376.pool.root.1
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc       530 Jun  5 12:44 boinc_task_state.xml
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc      1013 Jun  5 12:45 memory_monitor_summary.json
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc   1598969 Jun  5 12:46 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc    374252 Jun  5 12:46 log.45006595._056376.job.log.tgz.1
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc        96 Jun  5 12:47 pilot_heartbeat.json
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc      7695 Jun  5 12:47 heartbeat.json
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc      4539 Jun  5 12:47 pilotlog.txt
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc   1121438 Jun  5 12:47 log.45006595._056376.job.log.1
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc       357 Jun  5 12:47 output.list
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc       620 Jun  5 12:47 runtime_log
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc   1515520 Jun  5 12:47 result.tar.gz
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc      8659 Jun  5 12:47 runtime_log.err
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc       657 Jun  5 12:47 1igNDm4Hzg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmo1aKDmI5ydOm.diag
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc      8192 Jun  5 13:11 boinc_mmap_file
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc        28 Jun  5 13:11 wrapper_checkpoint.txt
[2025-06-05 13:11:18] -rw-r--r--. 1 boinc boinc     20628 Jun  5 13:11 stderr.txt
[2025-06-05 13:11:18] HITS file was successfully produced:
[2025-06-05 13:11:18] -rw-------. 1 boinc boinc 173779721 Jun  5 12:44 shared/HITS.pool.root.1
[2025-06-05 13:11:18]  *** Contents of shared directory: ***
[2025-06-05 13:11:19] total 379716
[2025-06-05 13:11:19] -rw-r--r--. 2 boinc boinc 213003938 Jun  5 08:34 ATLAS.root_0
[2025-06-05 13:11:19] -rw-r--r--. 2 boinc boinc     15093 Jun  5 08:34 start_atlas.sh
[2025-06-05 13:11:19] -rw-r--r--. 2 boinc boinc    508874 Jun  5 08:34 input.tar.gz
[2025-06-05 13:11:19] -rw-------. 1 boinc boinc 173779721 Jun  5 12:44 HITS.pool.root.1
[2025-06-05 13:11:19] -rw-------. 1 boinc boinc   1515520 Jun  5 12:47 result.tar.gz
13:11:20 (518): run_atlas exited; CPU time 47267.715497
13:11:20 (518): called boinc_finish(0)

</stderr_txt>
]]>

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