Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:50:43 (27843): wrapper (7.7.26015): starting
20:50:43 (27843): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 20:50:43] Arguments: --nthreads 12
[2025-06-04 20:50:43] Threads: 12
[2025-06-04 20:50:43] Checking for CVMFS
[2025-06-04 20:50:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:50:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:50:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:50:44] 2.11.2.0 2981 36378 87088 146799 0 58 19160610 20275201 1 130560 0 17223715 99.983 6925224 8198 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 20:50:44] CVMFS is ok
[2025-06-04 20:50:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:50:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:50:44] Further information can be found at the LHC@home message board.
[2025-06-04 20:50:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:50:44] Checking for apptainer binary...
[2025-06-04 20:50:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:50:44] Running /usr/bin/apptainer --version
[2025-06-04 20:50:44] apptainer version 1.3.2-1.el7
[2025-06-04 20:50:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:50:45] c-205-30.aglt2.org
[2025-06-04 20:50:45] apptainer works
[2025-06-04 20:50:45] Set ATHENA_PROC_NUMBER=12
[2025-06-04 20:50:45] Set ATHENA_CORE_NUMBER=12
[2025-06-04 20:50:45] Starting ATLAS job with PandaID=6677470755
[2025-06-04 20:50:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:53:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:53:28]  scope=mc23_13p6TeV
[2025-06-04 21:53:28]  status=None
[2025-06-04 21:53:28]  status_code=0
[2025-06-04 21:53:28]  storage_token=
[2025-06-04 21:53:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677470755/log.45006595._020654.job.log.tgz.1
[2025-06-04 21:53:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/c6/log.45006595._020654.job.log.tgz.1
[2025-06-04 21:53:28]  workdir=None
[2025-06-04 21:53:28] ]
[2025-06-04 21:53:28] 2025-06-05 01:52:57,900 | INFO     | transferring file log.45006595._020654.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677470755/log.45006595._020654.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 21:53:28] 2025-06-05 01:52:57,900 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677470755/log.45006595._020654.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._020654.job
[2025-06-04 21:53:28] 2025-06-05 01:52:57,921 | INFO     | adding to output.list: log.45006595._020654.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/c6/log.45006595._020654.job.log.tg
[2025-06-04 21:53:28] 2025-06-05 01:52:57,922 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:53:28] 2025-06-05 01:52:57,922 | INFO     | summary of transferred files:
[2025-06-04 21:53:28] 2025-06-05 01:52:57,922 | INFO     |  -- lfn=log.45006595._020654.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:53:28] 2025-06-05 01:52:57,922 | INFO     | stage-out finished correctly
[2025-06-04 21:53:28] 2025-06-05 01:52:58,107 | INFO     | monitor loop #281: job 0:6677470755 is in state 'finished'
[2025-06-04 21:53:28] 2025-06-05 01:52:58,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:53:28] 2025-06-05 01:53:00,196 | INFO     | PID=31427 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 21:53:28] 2025-06-05 01:53:00,610 | INFO     | monitor loop #282: job 0:6677470755 is in state 'finished'
[2025-06-04 21:53:28] 2025-06-05 01:53:00,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:53:28] 2025-06-05 01:53:01,336 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:53:28] 2025-06-05 01:53:03,114 | INFO     | monitor loop #283: job 0:6677470755 is in state 'finished'
[2025-06-04 21:53:28] 2025-06-05 01:53:03,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:53:28] 2025-06-05 01:53:03,494 | INFO     | job 6677470755 has state=finished
[2025-06-04 21:53:28] 2025-06-05 01:53:03,494 | INFO     | preparing for final server update for job 6677470755 in state='finished'
[2025-06-04 21:53:28] 2025-06-05 01:53:03,562 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 21:53:28] 2025-06-05 01:53:03,563 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:53:28] 2025-06-05 01:53:03,563 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:53:28] 2025-06-05 01:53:03,563 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:53:28] 2025-06-05 01:53:03,563 | INFO     | job 6677470755 has finished - writing final server update
[2025-06-04 21:53:28] 2025-06-05 01:53:03,563 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:53:28] 2025-06-05 01:53:03,565 | INFO     | executing command: lscpu
[2025-06-04 21:53:28] 2025-06-05 01:53:03,592 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:53:28] 2025-06-05 01:53:05,617 | INFO     | monitor loop #284: job 0:6677470755 is in state 'finished'
[2025-06-04 21:53:28] 2025-06-05 01:53:05,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:53:28] 2025-06-05 01:53:08,120 | INFO     | monitor loop #285: job 0:6677470755 is in state 'finished'
[2025-06-04 21:53:28] 2025-06-05 01:53:08,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:53:28] 2025-06-05 01:53:08,173 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 21:53:28] 2025-06-05 01:53:08,173 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677470755/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:53:28] 2025-06-05 01:53:08,176 | INFO     | extracted standard info from prmon json
[2025-06-04 21:53:28] 2025-06-05 01:53:08,176 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:53:28] 2025-06-05 01:53:08,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:53:28] 2025-06-05 01:53:08,176 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:53:28] 2025-06-05 01:53:08,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:53:28] 2025-06-05 01:53:08,179 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:53:28] 2025-06-05 01:53:08,179 | INFO     | sum of square deviations: 48810217.5
[2025-06-04 21:53:28] 2025-06-05 01:53:08,179 | INFO     | sum of deviations: -4909432133.999999
[2025-06-04 21:53:28] 2025-06-05 01:53:08,180 | INFO     | mean x: 1749086610.5
[2025-06-04 21:53:28] 2025-06-05 01:53:08,180 | INFO     | mean y: 2752142.2592592593
[2025-06-04 21:53:28] 2025-06-05 01:53:08,180 | INFO     | -- intersect: 175929483276.73615
[2025-06-04 21:53:28] 2025-06-05 01:53:08,180 | INFO     | intersect: 175929483276.73615
[2025-06-04 21:53:28] 2025-06-05 01:53:08,180 | INFO     | chi2: 0.04559260887273824
[2025-06-04 21:53:28] 2025-06-05 01:53:08,180 | INFO     | -- intersect: 175929483276.73615
[2025-06-04 21:53:28] 2025-06-05 01:53:08,181 | INFO     | current memory leak: -100.58 B/s (using 54 data points, chi2=0.05)
[2025-06-04 21:53:28] 2025-06-05 01:53:08,181 | INFO     | ..............................
[2025-06-04 21:53:28] 2025-06-05 01:53:08,181 | INFO     | . Timing measurements:
[2025-06-04 21:53:28] 2025-06-05 01:53:08,181 | INFO     | . get job = 0 s
[2025-06-04 21:53:28] 2025-06-05 01:53:08,181 | INFO     | . initial setup = 2 s
[2025-06-04 21:53:28] 2025-06-05 01:53:08,181 | INFO     | . payload setup = 9 s
[2025-06-04 21:53:28] 2025-06-05 01:53:08,181 | INFO     | . stage-in = 0 s
[2025-06-04 21:53:28] 2025-06-05 01:53:08,181 | INFO     | . payload execution = 3689 s
[2025-06-04 21:53:28] 2025-06-05 01:53:08,182 | INFO     | . stage-out = 0 s
[2025-06-04 21:53:28] 2025-06-05 01:53:08,182 | INFO     | . log creation = 0 s
[2025-06-04 21:53:28] 2025-06-05 01:53:08,182 | INFO     | ..............................
[2025-06-04 21:53:28] 2025-06-05 01:53:08,578 | INFO     | 
[2025-06-04 21:53:28] 2025-06-05 01:53:08,579 | INFO     | job summary report
[2025-06-04 21:53:28] 2025-06-05 01:53:08,579 | INFO     | --------------------------------------------------
[2025-06-04 21:53:28] 2025-06-05 01:53:08,579 | INFO     | PanDA job id: 6677470755
[2025-06-04 21:53:28] 2025-06-05 01:53:08,579 | INFO     | task id: 45006595
[2025-06-04 21:53:28] 2025-06-05 01:53:08,579 | INFO     | errors: (none)
[2025-06-04 21:53:28] 2025-06-05 01:53:08,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:53:28] 2025-06-05 01:53:08,580 | INFO     | pilot state: finished 
[2025-06-04 21:53:28] 2025-06-05 01:53:08,580 | INFO     | transexitcode: 0
[2025-06-04 21:53:28] 2025-06-05 01:53:08,580 | INFO     | exeerrorcode: 0
[2025-06-04 21:53:28] 2025-06-05 01:53:08,580 | INFO     | exeerrordiag: 
[2025-06-04 21:53:28] 2025-06-05 01:53:08,580 | INFO     | exitcode: 0
[2025-06-04 21:53:28] 2025-06-05 01:53:08,581 | INFO     | exitmsg: OK
[2025-06-04 21:53:28] 2025-06-05 01:53:08,581 | INFO     | cpuconsumptiontime: 39542 s
[2025-06-04 21:53:28] 2025-06-05 01:53:08,581 | INFO     | nevents: 400
[2025-06-04 21:53:28] 2025-06-05 01:53:08,581 | INFO     | neventsw: 0
[2025-06-04 21:53:28] 2025-06-05 01:53:08,581 | INFO     | pid: 5631
[2025-06-04 21:53:28] 2025-06-05 01:53:08,581 | INFO     | pgrp: 5631
[2025-06-04 21:53:28] 2025-06-05 01:53:08,582 | INFO     | corecount: 12
[2025-06-04 21:53:28] 2025-06-05 01:53:08,582 | INFO     | event service: False
[2025-06-04 21:53:28] 2025-06-05 01:53:08,582 | INFO     | sizes: {0: 2397340, 1: 2397340, 5: 2397574, 11: 2397630, 3702: 2423224, 3703: 2432165, 3707: 2432349, 3713: 2432519}
[2025-06-04 21:53:28] 2025-06-05 01:53:08,582 | INFO     | --------------------------------------------------
[2025-06-04 21:53:28] 2025-06-05 01:53:08,582 | INFO     | 
[2025-06-04 21:53:28] 2025-06-05 01:53:08,582 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:53:28] 2025-06-05 01:53:08,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:53:28] 2025-06-05 01:53:08,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:53:28] 2025-06-05 01:53:08,610 | INFO     | job 6677470755 has completed (purged errors)
[2025-06-04 21:53:28] 2025-06-05 01:53:08,610 | INFO     | overall cleanup function is called
[2025-06-04 21:53:28] 2025-06-05 01:53:09,618 | INFO     | --- collectZombieJob: --- 10, [5631]
[2025-06-04 21:53:28] 2025-06-05 01:53:09,618 | INFO     | zombie collector waiting for pid 5631
[2025-06-04 21:53:28] 2025-06-05 01:53:09,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:53:28] 2025-06-05 01:53:09,619 | INFO     | collected zombie processes
[2025-06-04 21:53:28] 2025-06-05 01:53:09,619 | INFO     | will attempt to kill all subprocesses of pid=5631
[2025-06-04 21:53:28] 2025-06-05 01:53:09,711 | INFO     | process IDs to be killed: [5631] (in reverse order)
[2025-06-04 21:53:28] 2025-06-05 01:53:09,761 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:53:28] 2025-06-05 01:53:09,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:53:28] 2025-06-05 01:53:09,766 | INFO     | did not find any defunct processes belonging to 5631
[2025-06-04 21:53:28] 2025-06-05 01:53:09,769 | INFO     | did not find any defunct processes belonging to 5631
[2025-06-04 21:53:28] 2025-06-05 01:53:09,769 | INFO     | ready for new job
[2025-06-04 21:53:28] 2025-06-05 01:53:09,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:53:28] 2025-06-05 01:53:09,771 | INFO     | **************************************
[2025-06-04 21:53:28] 2025-06-05 01:53:09,771 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:53:28] 2025-06-05 01:53:09,771 | INFO     | **************************************
[2025-06-04 21:53:28] 2025-06-05 01:53:09,771 | INFO     | 
[2025-06-04 21:53:28] 2025-06-05 01:53:09,771 | INFO     | architecture information:
[2025-06-04 21:53:28] 2025-06-05 01:53:09,772 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:53:28] 2025-06-05 01:53:09,786 | INFO     | cat /etc/os-release:
[2025-06-04 21:53:28] NAME="CentOS Linux"
[2025-06-04 21:53:28] VERSION="7 (Core)"
[2025-06-04 21:53:28] ID="centos"
[2025-06-04 21:53:28] ID_LIKE="rhel fedora"
[2025-06-04 21:53:28] VERSION_ID="7"
[2025-06-04 21:53:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:53:28] ANSI_COLOR="0;31"
[2025-06-04 21:53:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:53:28] HOME_URL="https://www.centos.org/"
[2025-06-04 21:53:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:53:28] 
[2025-06-04 21:53:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:53:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:53:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:53:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:53:28] 
[2025-06-04 21:53:28] 2025-06-05 01:53:09,786 | INFO     | **************************************
[2025-06-04 21:53:28] 2025-06-05 01:53:10,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:53:28] 2025-06-05 01:53:10,305 | INFO     | sufficient remaining disk space (29419896832 B)
[2025-06-04 21:53:28] 2025-06-05 01:53:10,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:53:28] 2025-06-05 01:53:10,306 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:53:28] 2025-06-05 01:53:10,306 | INFO     | update_server=False
[2025-06-04 21:53:28] 2025-06-05 01:53:10,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:53:28] 2025-06-05 01:53:10,306 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:53:28] 2025-06-05 01:53:10,307 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:53:28] 2025-06-05 01:53:10,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:53:28] 2025-06-05 01:53:10,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:53:28] 2025-06-05 01:53:10,406 | INFO     | all data control threads have been joined
[2025-06-04 21:53:28] 2025-06-05 01:53:10,629 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:53:28] 2025-06-05 01:53:10,629 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:53:28] 2025-06-05 01:53:10,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:53:28] 2025-06-05 01:53:10,629 | INFO     | will abort loop
[2025-06-04 21:53:28] 2025-06-05 01:53:11,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:53:28] 2025-06-05 01:53:11,160 | INFO     | all job control threads have been joined
[2025-06-04 21:53:28] 2025-06-05 01:53:11,312 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:11,412 | INFO     | [data] control thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:11,569 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:11,635 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:11,757 | INFO     | all payload control threads have been joined
[2025-06-04 21:53:28] 2025-06-05 01:53:11,837 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:11,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:53:28] 2025-06-05 01:53:12,030 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:12,165 | INFO     | [job] control thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:12,430 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:12,518 | INFO     | [job] validate thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:12,597 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:12,680 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:12,763 | INFO     | [payload] control thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:13,028 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:13,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:53:28] 2025-06-05 01:53:14,282 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:15,933 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:21,060 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:53:28] 2025-06-05 01:53:22,064 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:53:28] 2025-06-05 01:53:22,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477991888704)>', '<ExcThread(monitor, started 140476954957568)>']
[2025-06-04 21:53:28] 2025-06-05 01:53:23,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:53:28] 2025-06-05 01:53:23,364 | INFO     | [monitor] control thread has ended
[2025-06-04 21:53:28] 2025-06-05 01:53:27,740 | INFO     | all workflow threads have been joined
[2025-06-04 21:53:28] 2025-06-05 01:53:27,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:53:28] 2025-06-05 01:53:27,740 | INFO     | traces error code: 0
[2025-06-04 21:53:28] 2025-06-05 01:53:27,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:53:28] 2025-06-05 01:53:27,821 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:53:28] 2025-06-05 01:53:27,824 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:53:28] 2025-06-05 01:53:27,828 [wrapper] pilotpid: 31427
[2025-06-04 21:53:28] 2025-06-05 01:53:27,831 [wrapper] Pilot exit status: 0
[2025-06-04 21:53:28] 2025-06-05 01:53:27,846 [wrapper] pandaids: 6677470755
[2025-06-04 21:53:28] 2025-06-05 01:53:27,885 [wrapper] cleanup supervisor_pilot 19420 31428
[2025-06-04 21:53:28] 2025-06-05 01:53:27,889 [wrapper] Test setup, not cleaning
[2025-06-04 21:53:28] 2025-06-05 01:53:27,893 [wrapper] apfmon messages muted
[2025-06-04 21:53:28] 2025-06-05 01:53:27,897 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:53:28] 2025-06-05 01:53:27,900 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:53:28]  *** Error codes and diagnostics ***
[2025-06-04 21:53:28]     "exeErrorCode": 0,
[2025-06-04 21:53:28]     "exeErrorDiag": "",
[2025-06-04 21:53:28]     "pilotErrorCode": 0,
[2025-06-04 21:53:28]     "pilotErrorDiag": "",
[2025-06-04 21:53:28]  *** Listing of results directory ***
[2025-06-04 21:53:28] total 386296
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 01:14 pilot3.tar.gz
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 01:20 queuedata.json
[2025-06-04 21:53:28] -rwx------ 1 boincer umatlas     37140 Jun  3 01:20 runpilot2-wrapper.sh
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas       100 Jun  4 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:53:28] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 20:50 run_atlas
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas       105 Jun  4 20:50 job.xml
[2025-06-04 21:53:28] -rw-r--r-- 2 boincer umatlas 214971465 Jun  4 20:50 EVNT.45006593._000826.pool.root.1
[2025-06-04 21:53:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:50 start_atlas.sh
[2025-06-04 21:53:28] drwxrwx--x 2 boincer umatlas      4096 Jun  4 20:50 shared
[2025-06-04 21:53:28] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 20:50 input.tar.gz
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas         0 Jun  4 20:50 boinc_lockfile
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 20:50 pandaJob.out
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas    987117 Jun  4 20:50 agis_schedconf.cvmfs.json
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas   1598969 Jun  4 20:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:53:28] drwx------ 4 boincer umatlas      4096 Jun  4 20:50 pilot3
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 21:46 init_data.xml
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas 175287644 Jun  4 21:52 HITS.45006595._020654.pool.root.1
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas       529 Jun  4 21:52 boinc_task_state.xml
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas        95 Jun  4 21:52 pilot_heartbeat.json
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas      1045 Jun  4 21:52 memory_monitor_summary.json
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas    371540 Jun  4 21:52 log.45006595._020654.job.log.tgz.1
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas      7750 Jun  4 21:53 heartbeat.json
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:53 boinc_mmap_file
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas        27 Jun  4 21:53 wrapper_checkpoint.txt
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas      4734 Jun  4 21:53 pilotlog.txt
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas    369427 Jun  4 21:53 log.45006595._020654.job.log.1
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas       357 Jun  4 21:53 output.list
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:53 runtime_log
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas    757760 Jun  4 21:53 result.tar.gz
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas       659 Jun  4 21:53 uHCMDmYFZg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5AiKDmhMib8n.diag
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 21:53 runtime_log.err
[2025-06-04 21:53:28] -rw-r--r-- 1 boincer umatlas     21954 Jun  4 21:53 stderr.txt
[2025-06-04 21:53:28] HITS file was successfully produced:
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas 175287644 Jun  4 21:52 shared/HITS.pool.root.1
[2025-06-04 21:53:28]  *** Contents of shared directory: ***
[2025-06-04 21:53:28] total 382376
[2025-06-04 21:53:28] -rw-r--r-- 2 boincer umatlas 214971465 Jun  4 20:50 ATLAS.root_0
[2025-06-04 21:53:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:50 start_atlas.sh
[2025-06-04 21:53:28] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 20:50 input.tar.gz
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas 175287644 Jun  4 21:52 HITS.pool.root.1
[2025-06-04 21:53:28] -rw------- 1 boincer umatlas    757760 Jun  4 21:53 result.tar.gz
21:53:29 (27843): run_atlas exited; CPU time 39519.315962
21:53:29 (27843): called boinc_finish(0)

</stderr_txt>
]]>

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