Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:46:41 (27273): wrapper (7.7.26015): starting
20:46:41 (27273): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 20:46:41] Arguments: --nthreads 10
[2025-06-04 20:46:41] Threads: 10
[2025-06-04 20:46:41] Checking for CVMFS
[2025-06-04 20:46:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:46:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:46:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:46:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:46:44] 2.11.2.0 20666 108762 309708 146799 0 327 10594629 18432001 17995 130560 0 552606358 99.213 962857064 35680 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 20:46:44] CVMFS is ok
[2025-06-04 20:46:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:46:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:46:44] Further information can be found at the LHC@home message board.
[2025-06-04 20:46:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:46:44] Checking for apptainer binary...
[2025-06-04 20:46:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:46:44] Running /usr/bin/apptainer --version
[2025-06-04 20:46:44] apptainer version 1.3.2-1.el7
[2025-06-04 20:46:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:46:49] c-210-2.aglt2.org
[2025-06-04 20:46:49] apptainer works
[2025-06-04 20:46:49] Set ATHENA_PROC_NUMBER=10
[2025-06-04 20:46:49] Set ATHENA_CORE_NUMBER=10
[2025-06-04 20:46:49] Starting ATLAS job with PandaID=6668442702
[2025-06-04 20:46:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:21:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:21:41] 2025-06-05 07:21:24,666 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668442702/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,666 | INFO     | extracted standard info from prmon json
[2025-06-05 03:21:41] 2025-06-05 07:21:24,666 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:21:41] 2025-06-05 07:21:24,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:21:41] 2025-06-05 07:21:24,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:21:41] 2025-06-05 07:21:24,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:21:41] 2025-06-05 07:21:24,671 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:21:41] 2025-06-05 07:21:24,671 | INFO     | sum of square deviations: 17972561755.416046
[2025-06-05 03:21:41] 2025-06-05 07:21:24,673 | INFO     | sum of deviations: 68640899070.50635
[2025-06-05 03:21:41] 2025-06-05 07:21:24,674 | INFO     | mean x: 1749096264.2764857
[2025-06-05 03:21:41] 2025-06-05 07:21:24,674 | INFO     | mean y: 2559980.9018087857
[2025-06-05 03:21:41] 2025-06-05 07:21:24,674 | INFO     | -- intersect: -6677597348.624234
[2025-06-05 03:21:41] 2025-06-05 07:21:24,674 | INFO     | intersect: -6677597348.624234
[2025-06-05 03:21:41] 2025-06-05 07:21:24,674 | INFO     | chi2: 2.7928191910029665
[2025-06-05 03:21:41] 2025-06-05 07:21:24,675 | INFO     | sum of square deviations: 17284944287.528645
[2025-06-05 03:21:41] 2025-06-05 07:21:24,677 | INFO     | sum of deviations: 93996179708.83247
[2025-06-05 03:21:41] 2025-06-05 07:21:24,677 | INFO     | mean x: 1749096111.7801046
[2025-06-05 03:21:41] 2025-06-05 07:21:24,677 | INFO     | mean y: 2565541.6884816755
[2025-06-05 03:21:41] 2025-06-05 07:21:24,677 | INFO     | -- intersect: -9509085159.409006
[2025-06-05 03:21:41] 2025-06-05 07:21:24,677 | INFO     | intersect: -9509085159.409006
[2025-06-05 03:21:41] 2025-06-05 07:21:24,677 | INFO     | chi2: 2.003779035699429
[2025-06-05 03:21:41] 2025-06-05 07:21:24,678 | INFO     | current chi2=2.003779035699429 (change=28.25246109183942 %)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,678 | INFO     | sum of square deviations: 16615071170.196384
[2025-06-05 03:21:41] 2025-06-05 07:21:24,680 | INFO     | sum of deviations: 92093981347.64455
[2025-06-05 03:21:41] 2025-06-05 07:21:24,680 | INFO     | mean x: 1749095959.281167
[2025-06-05 03:21:41] 2025-06-05 07:21:24,680 | INFO     | mean y: 2565108.625994695
[2025-06-05 03:21:41] 2025-06-05 07:21:24,680 | INFO     | -- intersect: -9692320275.808764
[2025-06-05 03:21:41] 2025-06-05 07:21:24,680 | INFO     | intersect: -9692320275.808764
[2025-06-05 03:21:41] 2025-06-05 07:21:24,681 | INFO     | chi2: 2.0042720832172014
[2025-06-05 03:21:41] 2025-06-05 07:21:24,681 | INFO     | current chi2=2.0042720832172014 (change=-0.024605882634177758 %)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,681 | INFO     | right removable region: 376
[2025-06-05 03:21:41] 2025-06-05 07:21:24,681 | INFO     | sum of square deviations: 17284879017.528645
[2025-06-05 03:21:41] 2025-06-05 07:21:24,683 | INFO     | sum of deviations: -13540618645.30891
[2025-06-05 03:21:41] 2025-06-05 07:21:24,684 | INFO     | mean x: 1749096416.7801046
[2025-06-05 03:21:41] 2025-06-05 07:21:24,684 | INFO     | mean y: 2578135.722513089
[2025-06-05 03:21:41] 2025-06-05 07:21:24,684 | INFO     | -- intersect: 1372784286.976325
[2025-06-05 03:21:41] 2025-06-05 07:21:24,684 | INFO     | intersect: 1372784286.976325
[2025-06-05 03:21:41] 2025-06-05 07:21:24,684 | INFO     | chi2: 0.8653249526433172
[2025-06-05 03:21:41] 2025-06-05 07:21:24,684 | INFO     | current chi2=0.8653249526433172 (change=69.01607682190988 %)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,685 | INFO     | sum of square deviations: 16614964054.631369
[2025-06-05 03:21:41] 2025-06-05 07:21:24,687 | INFO     | sum of deviations: -19660653034.275864
[2025-06-05 03:21:41] 2025-06-05 07:21:24,687 | INFO     | mean x: 1749096569.2838197
[2025-06-05 03:21:41] 2025-06-05 07:21:24,687 | INFO     | mean y: 2579513.4137931033
[2025-06-05 03:21:41] 2025-06-05 07:21:24,687 | INFO     | -- intersect: 2072302966.263863
[2025-06-05 03:21:41] 2025-06-05 07:21:24,687 | INFO     | intersect: 2072302966.263863
[2025-06-05 03:21:41] 2025-06-05 07:21:24,687 | INFO     | chi2: 0.8334486877323298
[2025-06-05 03:21:41] 2025-06-05 07:21:24,687 | INFO     | current chi2=0.8334486877323298 (change=3.68373347071694 %)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,688 | INFO     | left removable region: 20
[2025-06-05 03:21:41] 2025-06-05 07:21:24,688 | INFO     | sum of square deviations: 13990218171.438213
[2025-06-05 03:21:41] 2025-06-05 07:21:24,690 | INFO     | sum of deviations: 14861434195.662914
[2025-06-05 03:21:41] 2025-06-05 07:21:24,690 | INFO     | mean x: 1749096538.7977529
[2025-06-05 03:21:41] 2025-06-05 07:21:24,691 | INFO     | mean y: 2582869.3286516853
[2025-06-05 03:21:41] 2025-06-05 07:21:24,691 | INFO     | -- intersect: -1855435554.3062916
[2025-06-05 03:21:41] 2025-06-05 07:21:24,691 | INFO     | intersect: -1855435554.3062916
[2025-06-05 03:21:41] 2025-06-05 07:21:24,691 | INFO     | chi2: 0.0156947449452401
[2025-06-05 03:21:41] 2025-06-05 07:21:24,691 | INFO     | -- intersect: -1855435554.3062916
[2025-06-05 03:21:41] 2025-06-05 07:21:24,691 | INFO     | current memory leak: 1.06 B/s (using 356 data points, chi2=0.02)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | ..............................
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | . Timing measurements:
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | . get job = 0 s
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | . initial setup = 3 s
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | . payload setup = 19 s
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | . stage-in = 0 s
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | . payload execution = 23594 s
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | . stage-out = 2 s
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | . log creation = 0 s
[2025-06-05 03:21:41] 2025-06-05 07:21:24,692 | INFO     | ..............................
[2025-06-05 03:21:41] 2025-06-05 07:21:24,751 | INFO     | 
[2025-06-05 03:21:41] 2025-06-05 07:21:24,751 | INFO     | job summary report
[2025-06-05 03:21:41] 2025-06-05 07:21:24,751 | INFO     | --------------------------------------------------
[2025-06-05 03:21:41] 2025-06-05 07:21:24,751 | INFO     | PanDA job id: 6668442702
[2025-06-05 03:21:41] 2025-06-05 07:21:24,751 | INFO     | task id: 44871837
[2025-06-05 03:21:41] 2025-06-05 07:21:24,751 | INFO     | errors: (none)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:21:41] 2025-06-05 07:21:24,751 | INFO     | pilot state: finished 
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | transexitcode: 0
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | exeerrorcode: 0
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | exeerrordiag: 
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | exitcode: 0
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | exitmsg: OK
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | cpuconsumptiontime: 70233 s
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | nevents: 400
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | neventsw: 0
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | pid: 11319
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | pgrp: 11319
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | corecount: 10
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | event service: False
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | sizes: {0: 2397392, 10: 2397598, 11: 2397626, 23616: 2432252, 23620: 2441193, 23621: 2441249, 23630: 2441547}
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | --------------------------------------------------
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | 
[2025-06-05 03:21:41] 2025-06-05 07:21:24,752 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 03:21:41] 2025-06-05 07:21:24,811 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,812 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,812 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,812 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:21:41] 2025-06-05 07:21:24,814 | INFO     | job 6668442702 has completed (purged errors)
[2025-06-05 03:21:41] 2025-06-05 07:21:24,814 | INFO     | overall cleanup function is called
[2025-06-05 03:21:41] 2025-06-05 07:21:25,824 | INFO     | --- collectZombieJob: --- 10, [11319]
[2025-06-05 03:21:41] 2025-06-05 07:21:25,824 | INFO     | zombie collector waiting for pid 11319
[2025-06-05 03:21:41] 2025-06-05 07:21:25,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:21:41] 2025-06-05 07:21:25,825 | INFO     | collected zombie processes
[2025-06-05 03:21:41] 2025-06-05 07:21:25,825 | INFO     | will attempt to kill all subprocesses of pid=11319
[2025-06-05 03:21:41] 2025-06-05 07:21:26,156 | INFO     | process IDs to be killed: [11319] (in reverse order)
[2025-06-05 03:21:41] 2025-06-05 07:21:26,291 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:21:41] 2025-06-05 07:21:26,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:21:41] 2025-06-05 07:21:26,300 | INFO     | did not find any defunct processes belonging to 11319
[2025-06-05 03:21:41] 2025-06-05 07:21:26,309 | INFO     | did not find any defunct processes belonging to 11319
[2025-06-05 03:21:41] 2025-06-05 07:21:26,309 | INFO     | ready for new job
[2025-06-05 03:21:41] 2025-06-05 07:21:26,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:21:41] 2025-06-05 07:21:26,311 | INFO     | **************************************
[2025-06-05 03:21:41] 2025-06-05 07:21:26,311 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:21:41] 2025-06-05 07:21:26,311 | INFO     | **************************************
[2025-06-05 03:21:41] 2025-06-05 07:21:26,311 | INFO     | 
[2025-06-05 03:21:41] 2025-06-05 07:21:26,313 | INFO     | architecture information:
[2025-06-05 03:21:41] 2025-06-05 07:21:26,313 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:21:41] 2025-06-05 07:21:26,325 | INFO     | cat /etc/os-release:
[2025-06-05 03:21:41] NAME="CentOS Linux"
[2025-06-05 03:21:41] VERSION="7 (Core)"
[2025-06-05 03:21:41] ID="centos"
[2025-06-05 03:21:41] ID_LIKE="rhel fedora"
[2025-06-05 03:21:41] VERSION_ID="7"
[2025-06-05 03:21:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:21:41] ANSI_COLOR="0;31"
[2025-06-05 03:21:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:21:41] HOME_URL="https://www.centos.org/"
[2025-06-05 03:21:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:21:41] 
[2025-06-05 03:21:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:21:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:21:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:21:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:21:41] 
[2025-06-05 03:21:41] 2025-06-05 07:21:26,325 | INFO     | **************************************
[2025-06-05 03:21:41] 2025-06-05 07:21:26,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 03:21:41] 2025-06-05 07:21:26,852 | INFO     | sufficient remaining disk space (57159974912 B)
[2025-06-05 03:21:41] 2025-06-05 07:21:26,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:21:41] 2025-06-05 07:21:26,853 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:21:41] 2025-06-05 07:21:26,853 | INFO     | update_server=False
[2025-06-05 03:21:41] 2025-06-05 07:21:26,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:21:41] 2025-06-05 07:21:26,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:21:41] 2025-06-05 07:21:26,854 | INFO     | aborting loop
[2025-06-05 03:21:41] 2025-06-05 07:21:26,854 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:21:41] 2025-06-05 07:21:26,854 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:21:41] 2025-06-05 07:21:26,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:21:41] 2025-06-05 07:21:26,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:21:41] 2025-06-05 07:21:27,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:21:41] 2025-06-05 07:21:27,056 | INFO     | all data control threads have been joined
[2025-06-05 03:21:41] 2025-06-05 07:21:27,624 | INFO     | all job control threads have been joined
[2025-06-05 03:21:41] 2025-06-05 07:21:27,858 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:27,859 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:27,939 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:27,947 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:27,964 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:28,062 | INFO     | [data] control thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:28,161 | INFO     | all payload control threads have been joined
[2025-06-05 03:21:41] 2025-06-05 07:21:28,357 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:28,452 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:28,630 | INFO     | [job] control thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:28,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:28,765 | INFO     | [job] validate thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:28,914 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:29,010 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:29,166 | INFO     | [payload] control thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:29,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:21:41] 2025-06-05 07:21:30,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:21:41] 2025-06-05 07:21:30,771 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:34,138 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:21:41] 2025-06-05 07:21:35,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000445720384)>', '<ExcThread(monitor, started 140000003868416)>']
[2025-06-05 03:21:41] 2025-06-05 07:21:35,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:21:41] 2025-06-05 07:21:35,904 | INFO     | [monitor] control thread has ended
[2025-06-05 03:21:41] 2025-06-05 07:21:40,575 | INFO     | all workflow threads have been joined
[2025-06-05 03:21:41] 2025-06-05 07:21:40,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:21:41] 2025-06-05 07:21:40,575 | INFO     | traces error code: 0
[2025-06-05 03:21:41] 2025-06-05 07:21:40,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:21:41] 2025-06-05 07:21:40,770 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:21:41] 2025-06-05 07:21:40,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:21:41] 2025-06-05 07:21:40,782 [wrapper] pilotpid: 35179
[2025-06-05 03:21:41] 2025-06-05 07:21:40,785 [wrapper] Pilot exit status: 0
[2025-06-05 03:21:41] 2025-06-05 07:21:40,800 [wrapper] pandaids: 6668442702
[2025-06-05 03:21:41] 2025-06-05 07:21:40,886 [wrapper] cleanup supervisor_pilot  6917 35180
[2025-06-05 03:21:41] 2025-06-05 07:21:40,891 [wrapper] Test setup, not cleaning
[2025-06-05 03:21:41] 2025-06-05 07:21:40,899 [wrapper] apfmon messages muted
[2025-06-05 03:21:41] 2025-06-05 07:21:40,904 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:21:41] 2025-06-05 07:21:40,908 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:21:41]  *** Error codes and diagnostics ***
[2025-06-05 03:21:41]     "exeErrorCode": 0,
[2025-06-05 03:21:41]     "exeErrorDiag": "",
[2025-06-05 03:21:41]     "pilotErrorCode": 0,
[2025-06-05 03:21:41]     "pilotErrorDiag": "",
[2025-06-05 03:21:41]  *** Listing of results directory ***
[2025-06-05 03:21:41] total 421684
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas    495897 May 28 09:01 pilot3.tar.gz
[2025-06-05 03:21:41] -rwx------ 1 boincer umatlas     37140 May 28 09:07 runpilot2-wrapper.sh
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas      5111 May 28 09:07 queuedata.json
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas       100 Jun  4 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:21:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 20:46 run_atlas
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas       105 Jun  4 20:46 job.xml
[2025-06-05 03:21:41] -rw-r--r-- 2 boincer umatlas 223166354 Jun  4 20:46 EVNT.44871834._003302.pool.root.1
[2025-06-05 03:21:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:46 start_atlas.sh
[2025-06-05 03:21:41] drwxrwx--x 2 boincer umatlas      4096 Jun  4 20:46 shared
[2025-06-05 03:21:41] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 20:46 input.tar.gz
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas         0 Jun  4 20:46 boinc_lockfile
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 20:46 pandaJob.out
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas    987117 Jun  4 20:47 agis_schedconf.cvmfs.json
[2025-06-05 03:21:41] drwx------ 4 boincer umatlas      4096 Jun  4 20:47 pilot3
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas      6228 Jun  5 03:20 init_data.xml
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas 199952799 Jun  5 03:20 HITS.44871837._084624.pool.root.1
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas       531 Jun  5 03:20 boinc_task_state.xml
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas        95 Jun  5 03:21 pilot_heartbeat.json
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas      1060 Jun  5 03:21 memory_monitor_summary.json
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas   1598969 Jun  5 03:21 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas    503475 Jun  5 03:21 log.44871837._084624.job.log.tgz.1
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas      7750 Jun  5 03:21 heartbeat.json
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas        28 Jun  5 03:21 wrapper_checkpoint.txt
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 03:21 boinc_mmap_file
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas      4476 Jun  5 03:21 pilotlog.txt
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas   1921801 Jun  5 03:21 log.44871837._084624.job.log.1
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas       357 Jun  5 03:21 output.list
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas       620 Jun  5 03:21 runtime_log
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas   2447360 Jun  5 03:21 result.tar.gz
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas      8657 Jun  5 03:21 runtime_log.err
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas       661 Jun  5 03:21 nQSKDmsgVe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOCcKDmXNRJBn.diag
[2025-06-05 03:21:41] -rw-r--r-- 1 boincer umatlas     20923 Jun  5 03:21 stderr.txt
[2025-06-05 03:21:41] HITS file was successfully produced:
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas 199952799 Jun  5 03:20 shared/HITS.pool.root.1
[2025-06-05 03:21:41]  *** Contents of shared directory: ***
[2025-06-05 03:21:41] total 416120
[2025-06-05 03:21:41] -rw-r--r-- 2 boincer umatlas 223166354 Jun  4 20:46 ATLAS.root_0
[2025-06-05 03:21:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:46 start_atlas.sh
[2025-06-05 03:21:41] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 20:46 input.tar.gz
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas 199952799 Jun  5 03:20 HITS.pool.root.1
[2025-06-05 03:21:41] -rw------- 1 boincer umatlas   2447360 Jun  5 03:21 result.tar.gz
03:21:42 (27273): run_atlas exited; CPU time 71030.516974
03:21:42 (27273): called boinc_finish(0)

</stderr_txt>
]]>

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