Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:41:56 (1143705): wrapper (7.7.26015): starting
20:41:56 (1143705): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:41:56] Arguments: --nthreads 8
[2025-06-04 20:41:56] Threads: 8
[2025-06-04 20:41:56] Checking for CVMFS
[2025-06-04 20:41:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:41:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:41:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:41:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:41:56] 2.12.6.0 861369 33533 507864 146799 3 189 40601891 40960001 17775 16776704 0 157779910 99.664 144168169 26143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 20:41:56] CVMFS is ok
[2025-06-04 20:41:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:41:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:41:56] Further information can be found at the LHC@home message board.
[2025-06-04 20:41:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:41:56] Checking for apptainer binary...
[2025-06-04 20:41:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:41:56] Running /usr/bin/apptainer --version
[2025-06-04 20:41:56] apptainer version 1.4.1-1.el9
[2025-06-04 20:41:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:41:56] c7-13-33.aglt2.org
[2025-06-04 20:41:56] apptainer works
[2025-06-04 20:41:57] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:41:57] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:41:57] Starting ATLAS job with PandaID=6668210706
[2025-06-04 20:41:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:46:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:46:35] 2025-06-05 04:46:17,569 | INFO     | extracted standard info from prmon json
[2025-06-05 00:46:35] 2025-06-05 04:46:17,569 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:46:35] 2025-06-05 04:46:17,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:46:35] 2025-06-05 04:46:17,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:46:35] 2025-06-05 04:46:17,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:46:35] 2025-06-05 04:46:17,573 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:46:35] 2025-06-05 04:46:17,573 | INFO     | sum of square deviations: 4286487375.583318
[2025-06-05 00:46:35] 2025-06-05 04:46:17,574 | INFO     | sum of deviations: -4383411650.875004
[2025-06-05 00:46:35] 2025-06-05 04:46:17,574 | INFO     | mean x: 1749091448.7916667
[2025-06-05 00:46:35] 2025-06-05 04:46:17,574 | INFO     | mean y: 2112766.7625
[2025-06-05 00:46:35] 2025-06-05 04:46:17,574 | INFO     | -- intersect: 1790753946.193452
[2025-06-05 00:46:35] 2025-06-05 04:46:17,574 | INFO     | intersect: 1790753946.193452
[2025-06-05 00:46:35] 2025-06-05 04:46:17,575 | INFO     | chi2: 3.2848989830470523
[2025-06-05 00:46:35] 2025-06-05 04:46:17,575 | INFO     | sum of square deviations: 4024141015.148945
[2025-06-05 00:46:35] 2025-06-05 04:46:17,576 | INFO     | sum of deviations: 23465595138.617043
[2025-06-05 00:46:35] 2025-06-05 04:46:17,576 | INFO     | mean x: 1749091296.2978723
[2025-06-05 00:46:35] 2025-06-05 04:46:17,576 | INFO     | mean y: 2128741.4340425534
[2025-06-05 00:46:35] 2025-06-05 04:46:17,576 | INFO     | -- intersect: -10197182879.330719
[2025-06-05 00:46:35] 2025-06-05 04:46:17,577 | INFO     | intersect: -10197182879.330719
[2025-06-05 00:46:35] 2025-06-05 04:46:17,577 | INFO     | chi2: 1.6156468293267254
[2025-06-05 00:46:35] 2025-06-05 04:46:17,577 | INFO     | current chi2=1.6156468293267254 (change=50.815935659973896 %)
[2025-06-05 00:46:35] 2025-06-05 04:46:17,577 | INFO     | sum of square deviations: 3772696787.3956556
[2025-06-05 00:46:35] 2025-06-05 04:46:17,578 | INFO     | sum of deviations: 21666034557.326103
[2025-06-05 00:46:35] 2025-06-05 04:46:17,578 | INFO     | mean x: 1749091143.7956522
[2025-06-05 00:46:35] 2025-06-05 04:46:17,578 | INFO     | mean y: 2127649.3260869565
[2025-06-05 00:46:35] 2025-06-05 04:46:17,579 | INFO     | -- intersect: -10042641729.43697
[2025-06-05 00:46:35] 2025-06-05 04:46:17,579 | INFO     | intersect: -10042641729.43697
[2025-06-05 00:46:35] 2025-06-05 04:46:17,579 | INFO     | chi2: 1.613333475032059
[2025-06-05 00:46:35] 2025-06-05 04:46:17,579 | INFO     | current chi2=1.613333475032059 (change=0.1431844047025133 %)
[2025-06-05 00:46:35] 2025-06-05 04:46:17,579 | INFO     | right removable region: 229
[2025-06-05 00:46:35] 2025-06-05 04:46:17,579 | INFO     | sum of square deviations: 4024098315.148945
[2025-06-05 00:46:35] 2025-06-05 04:46:17,580 | INFO     | sum of deviations: -36376221681.40425
[2025-06-05 00:46:35] 2025-06-05 04:46:17,581 | INFO     | mean x: 1749091601.2978723
[2025-06-05 00:46:35] 2025-06-05 04:46:17,581 | INFO     | mean y: 2131217.5914893616
[2025-06-05 00:46:35] 2025-06-05 04:46:17,581 | INFO     | -- intersect: 15813212072.74171
[2025-06-05 00:46:35] 2025-06-05 04:46:17,581 | INFO     | intersect: 15813212072.74171
[2025-06-05 00:46:35] 2025-06-05 04:46:17,581 | INFO     | chi2: 1.930323934669937
[2025-06-05 00:46:35] 2025-06-05 04:46:17,581 | INFO     | current chi2=1.930323934669937 (change=41.23642935042769 %)
[2025-06-05 00:46:35] 2025-06-05 04:46:17,581 | INFO     | sum of square deviations: 3772654026.799988
[2025-06-05 00:46:35] 2025-06-05 04:46:17,582 | INFO     | sum of deviations: -41339962998.80001
[2025-06-05 00:46:35] 2025-06-05 04:46:17,583 | INFO     | mean x: 1749091753.8
[2025-06-05 00:46:35] 2025-06-05 04:46:17,583 | INFO     | mean y: 2134175.7217391306
[2025-06-05 00:46:35] 2025-06-05 04:46:17,583 | INFO     | -- intersect: 19168320067.65476
[2025-06-05 00:46:35] 2025-06-05 04:46:17,583 | INFO     | intersect: 19168320067.65476
[2025-06-05 00:46:35] 2025-06-05 04:46:17,583 | INFO     | chi2: 1.8486537662125495
[2025-06-05 00:46:35] 2025-06-05 04:46:17,583 | INFO     | current chi2=1.8486537662125495 (change=4.2309048233063615 %)
[2025-06-05 00:46:35] 2025-06-05 04:46:17,583 | INFO     | left removable region: 20
[2025-06-05 00:46:35] 2025-06-05 04:46:17,583 | INFO     | sum of square deviations: 2830760678.00955
[2025-06-05 00:46:35] 2025-06-05 04:46:17,584 | INFO     | sum of deviations: -8293175189.325358
[2025-06-05 00:46:35] 2025-06-05 04:46:17,584 | INFO     | mean x: 1749091723.3014355
[2025-06-05 00:46:35] 2025-06-05 04:46:17,584 | INFO     | mean y: 2146117.751196172
[2025-06-05 00:46:35] 2025-06-05 04:46:17,585 | INFO     | -- intersect: 5126395651.179562
[2025-06-05 00:46:35] 2025-06-05 04:46:17,585 | INFO     | intersect: 5126395651.179562
[2025-06-05 00:46:35] 2025-06-05 04:46:17,585 | INFO     | chi2: 0.11728873592111345
[2025-06-05 00:46:35] 2025-06-05 04:46:17,585 | INFO     | -- intersect: 5126395651.179562
[2025-06-05 00:46:35] 2025-06-05 04:46:17,585 | INFO     | current memory leak: -2.93 B/s (using 209 data points, chi2=0.12)
[2025-06-05 00:46:35] 2025-06-05 04:46:17,586 | INFO     | ..............................
[2025-06-05 00:46:35] 2025-06-05 04:46:17,586 | INFO     | . Timing measurements:
[2025-06-05 00:46:35] 2025-06-05 04:46:17,586 | INFO     | . get job = 0 s
[2025-06-05 00:46:35] 2025-06-05 04:46:17,586 | INFO     | . initial setup = 2 s
[2025-06-05 00:46:35] 2025-06-05 04:46:17,586 | INFO     | . payload setup = 8 s
[2025-06-05 00:46:35] 2025-06-05 04:46:17,587 | INFO     | . stage-in = 0 s
[2025-06-05 00:46:35] 2025-06-05 04:46:17,587 | INFO     | . payload execution = 14584 s
[2025-06-05 00:46:35] 2025-06-05 04:46:17,587 | INFO     | . stage-out = 4 s
[2025-06-05 00:46:35] 2025-06-05 04:46:17,587 | INFO     | . log creation = 0 s
[2025-06-05 00:46:35] 2025-06-05 04:46:17,587 | INFO     | ..............................
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | 
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | job summary report
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | --------------------------------------------------
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | PanDA job id: 6668210706
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | task id: 44871837
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | errors: (none)
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | pilot state: finished 
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | transexitcode: 0
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | exeerrorcode: 0
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | exeerrordiag: 
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | exitcode: 0
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | exitmsg: OK
[2025-06-05 00:46:35] 2025-06-05 04:46:17,664 | INFO     | cpuconsumptiontime: 42955 s
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | nevents: 400
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | neventsw: 0
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | pid: 1167240
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | pgrp: 1167240
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | corecount: 8
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | event service: False
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | sizes: {0: 2397221, 1: 2397420, 7: 2397626, 11: 2397654, 14598: 2428256, 14603: 2437381, 14633: 2437495}
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | --------------------------------------------------
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | 
[2025-06-05 00:46:35] 2025-06-05 04:46:17,665 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 00:46:35] 2025-06-05 04:46:17,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:46:35] 2025-06-05 04:46:17,823 | INFO     | job 6668210706 has completed (purged errors)
[2025-06-05 00:46:35] 2025-06-05 04:46:17,823 | INFO     | overall cleanup function is called
[2025-06-05 00:46:35] 2025-06-05 04:46:18,837 | INFO     | --- collectZombieJob: --- 10, [1167240]
[2025-06-05 00:46:35] 2025-06-05 04:46:18,837 | INFO     | zombie collector waiting for pid 1167240
[2025-06-05 00:46:35] 2025-06-05 04:46:18,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:46:35] 2025-06-05 04:46:18,837 | INFO     | collected zombie processes
[2025-06-05 00:46:35] 2025-06-05 04:46:18,837 | INFO     | will attempt to kill all subprocesses of pid=1167240
[2025-06-05 00:46:35] 2025-06-05 04:46:20,116 | INFO     | process IDs to be killed: [1167240] (in reverse order)
[2025-06-05 00:46:35] 2025-06-05 04:46:21,153 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:46:35] 2025-06-05 04:46:21,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:46:35] 2025-06-05 04:46:21,256 | INFO     | did not find any defunct processes belonging to 1167240
[2025-06-05 00:46:35] 2025-06-05 04:46:21,323 | INFO     | did not find any defunct processes belonging to 1167240
[2025-06-05 00:46:35] 2025-06-05 04:46:21,323 | INFO     | ready for new job
[2025-06-05 00:46:35] 2025-06-05 04:46:21,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:46:35] 2025-06-05 04:46:21,344 | INFO     | **************************************
[2025-06-05 00:46:35] 2025-06-05 04:46:21,344 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:46:35] 2025-06-05 04:46:21,344 | INFO     | **************************************
[2025-06-05 00:46:35] 2025-06-05 04:46:21,344 | INFO     | 
[2025-06-05 00:46:35] 2025-06-05 04:46:21,360 | INFO     | architecture information:
[2025-06-05 00:46:35] 2025-06-05 04:46:21,385 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:46:35] 2025-06-05 04:46:21,565 | INFO     | cat /etc/os-release:
[2025-06-05 00:46:35] NAME="CentOS Linux"
[2025-06-05 00:46:35] VERSION="7 (Core)"
[2025-06-05 00:46:35] ID="centos"
[2025-06-05 00:46:35] ID_LIKE="rhel fedora"
[2025-06-05 00:46:35] VERSION_ID="7"
[2025-06-05 00:46:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:46:35] ANSI_COLOR="0;31"
[2025-06-05 00:46:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:46:35] HOME_URL="https://www.centos.org/"
[2025-06-05 00:46:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:46:35] 
[2025-06-05 00:46:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:46:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:46:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:46:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:46:35] 
[2025-06-05 00:46:35] 2025-06-05 04:46:21,565 | INFO     | **************************************
[2025-06-05 00:46:35] 2025-06-05 04:46:22,068 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 00:46:35] 2025-06-05 04:46:22,287 | INFO     | sufficient remaining disk space (85890957312 B)
[2025-06-05 00:46:35] 2025-06-05 04:46:22,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:46:35] 2025-06-05 04:46:22,288 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:46:35] 2025-06-05 04:46:22,288 | INFO     | update_server=False
[2025-06-05 00:46:35] 2025-06-05 04:46:22,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:46:35] 2025-06-05 04:46:22,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:46:35] 2025-06-05 04:46:22,305 | INFO     | aborting loop
[2025-06-05 00:46:35] 2025-06-05 04:46:22,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:46:35] 2025-06-05 04:46:22,839 | INFO     | all job control threads have been joined
[2025-06-05 00:46:35] 2025-06-05 04:46:23,190 | INFO     | all payload control threads have been joined
[2025-06-05 00:46:35] 2025-06-05 04:46:23,315 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:23,319 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:23,378 | INFO     | all data control threads have been joined
[2025-06-05 00:46:35] 2025-06-05 04:46:23,467 | INFO     | [job] validate thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:23,476 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:23,630 | INFO     | PID=1150836 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 00:46:35] 2025-06-05 04:46:23,630 | INFO     | .. there are 21 such processes running
[2025-06-05 00:46:35] 2025-06-05 04:46:23,648 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:46:35] 2025-06-05 04:46:23,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:46:35] 2025-06-05 04:46:23,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:46:35] 2025-06-05 04:46:23,713 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:23,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:46:35] 2025-06-05 04:46:23,864 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:23,871 | INFO     | [job] control thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:24,195 | INFO     | [payload] control thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:24,321 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:24,384 | INFO     | [data] control thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:24,420 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:24,612 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:24,756 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:24,821 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:25,736 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:25,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:46:35] 2025-06-05 04:46:29,750 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:46:35] 2025-06-05 04:46:29,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140581437876032)>', '<ExcThread(monitor, started 140580562650880)>']
[2025-06-05 00:46:35] 2025-06-05 04:46:30,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:46:35] 2025-06-05 04:46:30,690 | INFO     | [monitor] control thread has ended
[2025-06-05 00:46:35] 2025-06-05 04:46:34,787 | INFO     | all workflow threads have been joined
[2025-06-05 00:46:35] 2025-06-05 04:46:34,788 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:46:35] 2025-06-05 04:46:34,789 | INFO     | traces error code: 0
[2025-06-05 00:46:35] 2025-06-05 04:46:34,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:46:35] 2025-06-05 04:46:35,037 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:46:35] 2025-06-05 04:46:35,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:46:35] 2025-06-05 04:46:35,047 [wrapper] pilotpid: 1150836
[2025-06-05 00:46:35] 2025-06-05 04:46:35,049 [wrapper] Pilot exit status: 0
[2025-06-05 00:46:35] 2025-06-05 04:46:35,074 [wrapper] pandaids: 6668210706
[2025-06-05 00:46:35] 2025-06-05 04:46:35,158 [wrapper] cleanup supervisor_pilot 2046295 1150837
[2025-06-05 00:46:35] 2025-06-05 04:46:35,163 [wrapper] Test setup, not cleaning
[2025-06-05 00:46:35] 2025-06-05 04:46:35,166 [wrapper] apfmon messages muted
[2025-06-05 00:46:35] 2025-06-05 04:46:35,169 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:46:35] 2025-06-05 04:46:35,172 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:46:35]  *** Error codes and diagnostics ***
[2025-06-05 00:46:35]     "exeErrorCode": 0,
[2025-06-05 00:46:35]     "exeErrorDiag": "",
[2025-06-05 00:46:35]     "pilotErrorCode": 0,
[2025-06-05 00:46:35]     "pilotErrorDiag": "",
[2025-06-05 00:46:35]  *** Listing of results directory ***
[2025-06-05 00:46:35] total 420372
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas    495897 May 28 02:52 pilot3.tar.gz
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas      5111 May 28 03:02 queuedata.json
[2025-06-05 00:46:35] -rwx------. 1 boincer umatlas     37140 May 28 03:02 runpilot2-wrapper.sh
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas       100 Jun  4 20:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:46:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 20:41 run_atlas
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas       105 Jun  4 20:41 job.xml
[2025-06-05 00:46:35] -rw-r--r--. 2 boincer umatlas 223345016 Jun  4 20:41 EVNT.44871834._003139.pool.root.1
[2025-06-05 00:46:35] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 20:41 start_atlas.sh
[2025-06-05 00:46:35] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 20:41 shared
[2025-06-05 00:46:35] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 20:41 input.tar.gz
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas         0 Jun  4 20:41 boinc_lockfile
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 20:41 pandaJob.out
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas    987117 Jun  4 20:42 agis_schedconf.cvmfs.json
[2025-06-05 00:46:35] drwx------. 4 boincer umatlas      4096 Jun  4 20:42 pilot3
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas 200091349 Jun  5 00:44 HITS.44871837._080394.pool.root.1
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas       531 Jun  5 00:44 boinc_task_state.xml
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas      1032 Jun  5 00:45 memory_monitor_summary.json
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas   1598969 Jun  5 00:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas    389364 Jun  5 00:45 log.44871837._080394.job.log.tgz.1
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas      7690 Jun  5 00:46 heartbeat.json
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas        95 Jun  5 00:46 pilot_heartbeat.json
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas      6897 Jun  5 00:46 init_data.xml
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 00:46 boinc_mmap_file
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas        28 Jun  5 00:46 wrapper_checkpoint.txt
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas      4748 Jun  5 00:46 pilotlog.txt
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas   1205915 Jun  5 00:46 log.44871837._080394.job.log.1
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas       357 Jun  5 00:46 output.list
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas       620 Jun  5 00:46 runtime_log
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas   1617920 Jun  5 00:46 result.tar.gz
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas       657 Jun  5 00:46 yX5KDmezPe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaVbKDmT1Vicn.diag
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas      8660 Jun  5 00:46 runtime_log.err
[2025-06-05 00:46:35] -rw-r--r--. 1 boincer umatlas     20934 Jun  5 00:46 stderr.txt
[2025-06-05 00:46:35] HITS file was successfully produced:
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas 200091349 Jun  5 00:44 shared/HITS.pool.root.1
[2025-06-05 00:46:35]  *** Contents of shared directory: ***
[2025-06-05 00:46:35] total 415616
[2025-06-05 00:46:35] -rw-r--r--. 2 boincer umatlas 223345016 Jun  4 20:41 ATLAS.root_0
[2025-06-05 00:46:35] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 20:41 start_atlas.sh
[2025-06-05 00:46:35] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 20:41 input.tar.gz
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas 200091349 Jun  5 00:44 HITS.pool.root.1
[2025-06-05 00:46:35] -rw-------. 1 boincer umatlas   1617920 Jun  5 00:46 result.tar.gz
00:46:37 (1143705): run_atlas exited; CPU time 43155.681440
00:46:37 (1143705): called boinc_finish(0)

</stderr_txt>
]]>

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