Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:38:29 (42276): wrapper (7.7.26015): starting
20:38:29 (42276): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:38:29] Arguments: --nthreads 8
[2025-06-04 20:38:29] Threads: 8
[2025-06-04 20:38:29] Checking for CVMFS
[2025-06-04 20:38:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:38:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:38:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:38:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:38:32] 2.11.2.0 5089 29513 286924 146799 1 105 17641482 18432000 14463 130560 0 106318286 99.524 99241566 34501 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 20:38:32] CVMFS is ok
[2025-06-04 20:38:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:38:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:38:32] Further information can be found at the LHC@home message board.
[2025-06-04 20:38:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:38:32] Checking for apptainer binary...
[2025-06-04 20:38:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:38:32] Running /usr/bin/apptainer --version
[2025-06-04 20:38:32] apptainer version 1.3.2-1.el7
[2025-06-04 20:38:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:39:07] c-211-40.aglt2.org
[2025-06-04 20:39:07] apptainer works
[2025-06-04 20:39:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:39:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:39:07] Starting ATLAS job with PandaID=6680244739
[2025-06-04 20:39:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:24:03]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:24:03] 2025-06-05 04:23:43,949 | INFO     | sum of square deviations: 2871568481.757152
[2025-06-05 00:24:03] 2025-06-05 04:23:43,950 | INFO     | sum of deviations: 159275321224.77136
[2025-06-05 00:24:03] 2025-06-05 04:23:43,950 | INFO     | mean x: 1749090946.6142857
[2025-06-05 00:24:03] 2025-06-05 04:23:43,950 | INFO     | mean y: 2360040.6761904764
[2025-06-05 00:24:03] 2025-06-05 04:23:43,950 | INFO     | -- intersect: -97013268924.18086
[2025-06-05 00:24:03] 2025-06-05 04:23:43,950 | INFO     | intersect: -97013268924.18086
[2025-06-05 00:24:03] 2025-06-05 04:23:43,950 | INFO     | chi2: 10.317574767978355
[2025-06-05 00:24:03] 2025-06-05 04:23:43,950 | INFO     | sum of square deviations: 2671289468.4195175
[2025-06-05 00:24:03] 2025-06-05 04:23:43,951 | INFO     | sum of deviations: 168805779909.97083
[2025-06-05 00:24:03] 2025-06-05 04:23:43,951 | INFO     | mean x: 1749090794.112195
[2025-06-05 00:24:03] 2025-06-05 04:23:43,951 | INFO     | mean y: 2367095.131707317
[2025-06-05 00:24:03] 2025-06-05 04:23:43,951 | INFO     | -- intersect: -110527262555.28181
[2025-06-05 00:24:03] 2025-06-05 04:23:43,951 | INFO     | intersect: -110527262555.28181
[2025-06-05 00:24:03] 2025-06-05 04:23:43,952 | INFO     | chi2: 9.617884660012129
[2025-06-05 00:24:03] 2025-06-05 04:23:43,952 | INFO     | current chi2=9.617884660012129 (change=6.781536588790092 %)
[2025-06-05 00:24:03] 2025-06-05 04:23:43,952 | INFO     | right removable region: 204
[2025-06-05 00:24:03] 2025-06-05 04:23:43,957 | INFO     | sum of square deviations: 2671287639.1902604
[2025-06-05 00:24:03] 2025-06-05 04:23:43,958 | INFO     | sum of deviations: 86834015618.05861
[2025-06-05 00:24:03] 2025-06-05 04:23:43,958 | INFO     | mean x: 1749091099.117073
[2025-06-05 00:24:03] 2025-06-05 04:23:43,958 | INFO     | mean y: 2415174.4975609756
[2025-06-05 00:24:03] 2025-06-05 04:23:43,958 | INFO     | -- intersect: -56854286286.59195
[2025-06-05 00:24:03] 2025-06-05 04:23:43,958 | INFO     | intersect: -56854286286.59195
[2025-06-05 00:24:03] 2025-06-05 04:23:43,959 | INFO     | chi2: 4.914216444811928
[2025-06-05 00:24:03] 2025-06-05 04:23:43,959 | INFO     | current chi2=4.914216444811928 (change=52.37043050016269 %)
[2025-06-05 00:24:03] 2025-06-05 04:23:43,959 | INFO     | sum of square deviations: 2480541859.1200056
[2025-06-05 00:24:03] 2025-06-05 04:23:43,960 | INFO     | sum of deviations: 29177665996.800007
[2025-06-05 00:24:03] 2025-06-05 04:23:43,960 | INFO     | mean x: 1749091251.62
[2025-06-05 00:24:03] 2025-06-05 04:23:43,960 | INFO     | mean y: 2461222.8
[2025-06-05 00:24:03] 2025-06-05 04:23:43,960 | INFO     | -- intersect: -20571430787.955322
[2025-06-05 00:24:03] 2025-06-05 04:23:43,960 | INFO     | intersect: -20571430787.955322
[2025-06-05 00:24:03] 2025-06-05 04:23:43,960 | INFO     | chi2: 1.8159249865710017
[2025-06-05 00:24:03] 2025-06-05 04:23:43,960 | INFO     | current chi2=1.8159249865710017 (change=63.047517199041515 %)
[2025-06-05 00:24:03] 2025-06-05 04:23:43,961 | INFO     | sum of square deviations: 2299098579.046154
[2025-06-05 00:24:03] 2025-06-05 04:23:43,965 | INFO     | sum of deviations: -27138800.107686996
[2025-06-05 00:24:03] 2025-06-05 04:23:43,965 | INFO     | mean x: 1749091404.123077
[2025-06-05 00:24:03] 2025-06-05 04:23:43,965 | INFO     | mean y: 2485624.7128205127
[2025-06-05 00:24:03] 2025-06-05 04:23:43,965 | INFO     | -- intersect: 23132082.59818152
[2025-06-05 00:24:03] 2025-06-05 04:23:43,965 | INFO     | intersect: 23132082.59818152
[2025-06-05 00:24:03] 2025-06-05 04:23:43,965 | INFO     | chi2: 0.9282266159192099
[2025-06-05 00:24:03] 2025-06-05 04:23:43,965 | INFO     | current chi2=0.9282266159192099 (change=48.88408812128448 %)
[2025-06-05 00:24:03] 2025-06-05 04:23:43,966 | INFO     | sum of square deviations: 2126725236.4684207
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | sum of deviations: -9402700339.142109
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | mean x: 1749091556.6263158
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | mean y: 2493874.068421053
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | -- intersect: 7735596152.946215
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | intersect: 7735596152.946215
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | chi2: 0.8361065170369705
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | current chi2=0.8361065170369705 (change=9.924311294501518 %)
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | left removable region: 40
[2025-06-05 00:24:03] 2025-06-05 04:23:43,967 | INFO     | sum of square deviations: 1367603200.3109758
[2025-06-05 00:24:03] 2025-06-05 04:23:43,972 | INFO     | sum of deviations: -4260883583.457316
[2025-06-05 00:24:03] 2025-06-05 04:23:43,972 | INFO     | mean x: 1749091983.628049
[2025-06-05 00:24:03] 2025-06-05 04:23:43,972 | INFO     | mean y: 2512931.6646341463
[2025-06-05 00:24:03] 2025-06-05 04:23:43,972 | INFO     | -- intersect: 5451957125.2018385
[2025-06-05 00:24:03] 2025-06-05 04:23:43,972 | INFO     | intersect: 5451957125.2018385
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | chi2: 0.004555135778644012
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | -- intersect: 5451957125.2018385
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | current memory leak: -3.12 B/s (using 164 data points, chi2=0.00)
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | ..............................
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | . Timing measurements:
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | . get job = 0 s
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | . initial setup = 11 s
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | . payload setup = 172 s
[2025-06-05 00:24:03] 2025-06-05 04:23:43,973 | INFO     | . stage-in = 0 s
[2025-06-05 00:24:03] 2025-06-05 04:23:43,974 | INFO     | . payload execution = 12900 s
[2025-06-05 00:24:03] 2025-06-05 04:23:43,974 | INFO     | . stage-out = 5 s
[2025-06-05 00:24:03] 2025-06-05 04:23:43,974 | INFO     | . log creation = 1 s
[2025-06-05 00:24:03] 2025-06-05 04:23:43,974 | INFO     | ..............................
[2025-06-05 00:24:03] 2025-06-05 04:23:44,086 | INFO     | 
[2025-06-05 00:24:03] 2025-06-05 04:23:44,086 | INFO     | job summary report
[2025-06-05 00:24:03] 2025-06-05 04:23:44,086 | INFO     | --------------------------------------------------
[2025-06-05 00:24:03] 2025-06-05 04:23:44,086 | INFO     | PanDA job id: 6680244739
[2025-06-05 00:24:03] 2025-06-05 04:23:44,087 | INFO     | task id: 44871837
[2025-06-05 00:24:03] 2025-06-05 04:23:44,087 | INFO     | errors: (none)
[2025-06-05 00:24:03] 2025-06-05 04:23:44,087 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:24:03] 2025-06-05 04:23:44,087 | INFO     | pilot state: finished 
[2025-06-05 00:24:03] 2025-06-05 04:23:44,087 | INFO     | transexitcode: 0
[2025-06-05 00:24:03] 2025-06-05 04:23:44,087 | INFO     | exeerrorcode: 0
[2025-06-05 00:24:03] 2025-06-05 04:23:44,090 | INFO     | exeerrordiag: 
[2025-06-05 00:24:03] 2025-06-05 04:23:44,090 | INFO     | exitcode: 0
[2025-06-05 00:24:03] 2025-06-05 04:23:44,090 | INFO     | exitmsg: OK
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | cpuconsumptiontime: 44954 s
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | nevents: 400
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | neventsw: 0
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | pid: 2834
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | pgrp: 2834
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | corecount: 8
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | event service: False
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | sizes: {0: 2396513, 1: 2397198, 2: 2397397, 13: 2397397, 24: 2397453, 35: 2397481, 45: 2397637, 57: 2397665, 67: 2397693, 71: 2397927, 78: 2397955, 13078: 2427950,
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | --------------------------------------------------
[2025-06-05 00:24:03] 2025-06-05 04:23:44,091 | INFO     | 
[2025-06-05 00:24:03] 2025-06-05 04:23:44,092 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-05 00:24:03] 2025-06-05 04:23:44,302 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | job 6680244739 has completed (purged errors)
[2025-06-05 00:24:03] 2025-06-05 04:23:44,304 | INFO     | overall cleanup function is called
[2025-06-05 00:24:03] 2025-06-05 04:23:45,312 | INFO     | --- collectZombieJob: --- 10, [2834]
[2025-06-05 00:24:03] 2025-06-05 04:23:45,312 | INFO     | zombie collector waiting for pid 2834
[2025-06-05 00:24:03] 2025-06-05 04:23:45,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:24:03] 2025-06-05 04:23:45,313 | INFO     | collected zombie processes
[2025-06-05 00:24:03] 2025-06-05 04:23:45,313 | INFO     | will attempt to kill all subprocesses of pid=2834
[2025-06-05 00:24:03] 2025-06-05 04:23:45,766 | INFO     | process IDs to be killed: [2834] (in reverse order)
[2025-06-05 00:24:03] 2025-06-05 04:23:46,565 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:24:03] 2025-06-05 04:23:46,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:24:03] 2025-06-05 04:23:46,571 | INFO     | did not find any defunct processes belonging to 2834
[2025-06-05 00:24:03] 2025-06-05 04:23:46,575 | INFO     | did not find any defunct processes belonging to 2834
[2025-06-05 00:24:03] 2025-06-05 04:23:46,576 | INFO     | ready for new job
[2025-06-05 00:24:03] 2025-06-05 04:23:46,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:24:03] 2025-06-05 04:23:46,577 | INFO     | **************************************
[2025-06-05 00:24:03] 2025-06-05 04:23:46,577 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:24:03] 2025-06-05 04:23:46,577 | INFO     | **************************************
[2025-06-05 00:24:03] 2025-06-05 04:23:46,577 | INFO     | 
[2025-06-05 00:24:03] 2025-06-05 04:23:46,580 | INFO     | architecture information:
[2025-06-05 00:24:03] 2025-06-05 04:23:46,584 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:24:03] 2025-06-05 04:23:46,766 | INFO     | cat /etc/os-release:
[2025-06-05 00:24:03] NAME="CentOS Linux"
[2025-06-05 00:24:03] VERSION="7 (Core)"
[2025-06-05 00:24:03] ID="centos"
[2025-06-05 00:24:03] ID_LIKE="rhel fedora"
[2025-06-05 00:24:03] VERSION_ID="7"
[2025-06-05 00:24:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:24:03] ANSI_COLOR="0;31"
[2025-06-05 00:24:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:24:03] HOME_URL="https://www.centos.org/"
[2025-06-05 00:24:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:24:03] 
[2025-06-05 00:24:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:24:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:24:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:24:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:24:03] 
[2025-06-05 00:24:03] 2025-06-05 04:23:46,767 | INFO     | **************************************
[2025-06-05 00:24:03] 2025-06-05 04:23:47,270 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-05 00:24:03] 2025-06-05 04:23:47,521 | INFO     | sufficient remaining disk space (76248252416 B)
[2025-06-05 00:24:03] 2025-06-05 04:23:47,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:24:03] 2025-06-05 04:23:47,521 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:24:03] 2025-06-05 04:23:47,521 | INFO     | update_server=False
[2025-06-05 00:24:03] 2025-06-05 04:23:47,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:24:03] 2025-06-05 04:23:47,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:24:03] 2025-06-05 04:23:47,522 | INFO     | aborting loop
[2025-06-05 00:24:03] 2025-06-05 04:23:47,804 | INFO     | all data control threads have been joined
[2025-06-05 00:24:03] 2025-06-05 04:23:47,863 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:24:03] 2025-06-05 04:23:47,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:24:03] 2025-06-05 04:23:47,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:24:03] 2025-06-05 04:23:48,149 | INFO     | all payload control threads have been joined
[2025-06-05 00:24:03] 2025-06-05 04:23:48,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:24:03] 2025-06-05 04:23:48,526 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:48,527 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:48,810 | INFO     | [data] control thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:48,816 | INFO     | all job control threads have been joined
[2025-06-05 00:24:03] 2025-06-05 04:23:49,082 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:24:03] 2025-06-05 04:23:49,113 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,155 | INFO     | [payload] control thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,225 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,307 | INFO     | [job] validate thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,364 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,448 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,623 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,705 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:49,824 | INFO     | [job] control thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:50,107 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:50,187 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:50,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:24:03] 2025-06-05 04:23:54,745 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:24:03] 2025-06-05 04:23:55,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048724404032)>', '<ExcThread(monitor, started 140048146102016)>']
[2025-06-05 00:24:03] 2025-06-05 04:23:55,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:24:03] 2025-06-05 04:23:55,910 | INFO     | [monitor] control thread has ended
[2025-06-05 00:24:03] 2025-06-05 04:24:00,084 | INFO     | all workflow threads have been joined
[2025-06-05 00:24:03] 2025-06-05 04:24:00,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:24:03] 2025-06-05 04:24:00,088 | INFO     | traces error code: 0
[2025-06-05 00:24:03] 2025-06-05 04:24:00,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:24:03] 2025-06-05 04:24:00,426 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:24:03] 2025-06-05 04:24:00,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:24:03] 2025-06-05 04:24:00,491 [wrapper] pilotpid: 55087
[2025-06-05 00:24:03] 2025-06-05 04:24:00,537 [wrapper] Pilot exit status: 0
[2025-06-05 00:24:03] 2025-06-05 04:24:00,921 [wrapper] pandaids: 6680244739
[2025-06-05 00:24:03] 2025-06-05 04:24:01,551 [wrapper] cleanup supervisor_pilot 23864 55088
[2025-06-05 00:24:03] 2025-06-05 04:24:01,590 [wrapper] Test setup, not cleaning
[2025-06-05 00:24:03] 2025-06-05 04:24:01,695 [wrapper] apfmon messages muted
[2025-06-05 00:24:03] 2025-06-05 04:24:01,709 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:24:03] 2025-06-05 04:24:01,711 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:24:03]  *** Error codes and diagnostics ***
[2025-06-05 00:24:03]     "exeErrorCode": 0,
[2025-06-05 00:24:03]     "exeErrorDiag": "",
[2025-06-05 00:24:03]     "pilotErrorCode": 0,
[2025-06-05 00:24:03]     "pilotErrorDiag": "",
[2025-06-05 00:24:03]  *** Listing of results directory ***
[2025-06-05 00:24:03] total 425228
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 20:11 pilot3.tar.gz
[2025-06-05 00:24:03] -rwx------ 1 boincer umatlas     37140 Jun  4 20:38 runpilot2-wrapper.sh
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 20:38 queuedata.json
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas       100 Jun  4 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:24:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 20:38 run_atlas
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas       105 Jun  4 20:38 job.xml
[2025-06-05 00:24:03] -rw-r--r-- 2 boincer umatlas 222693141 Jun  4 20:38 EVNT.44871834._002390.pool.root.1
[2025-06-05 00:24:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:38 start_atlas.sh
[2025-06-05 00:24:03] drwxrwx--x 2 boincer umatlas      4096 Jun  4 20:38 shared
[2025-06-05 00:24:03] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 20:38 input.tar.gz
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas         0 Jun  4 20:38 boinc_lockfile
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 20:39 pandaJob.out
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas    987117 Jun  4 20:41 agis_schedconf.cvmfs.json
[2025-06-05 00:24:03] drwx------ 4 boincer umatlas      4096 Jun  4 20:41 pilot3
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas      6338 Jun  5 00:19 init_data.xml
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas 205792574 Jun  5 00:20 HITS.44871837._102264.pool.root.1
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas       531 Jun  5 00:21 boinc_task_state.xml
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas      1075 Jun  5 00:22 memory_monitor_summary.json
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas   1598969 Jun  5 00:22 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas    384833 Jun  5 00:22 log.44871837._102264.job.log.tgz.1
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas        95 Jun  5 00:23 pilot_heartbeat.json
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas      7757 Jun  5 00:23 heartbeat.json
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 00:23 boinc_mmap_file
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas        28 Jun  5 00:23 wrapper_checkpoint.txt
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas      4353 Jun  5 00:24 pilotlog.txt
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas   1176650 Jun  5 00:24 log.44871837._102264.job.log.1
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas       357 Jun  5 00:24 output.list
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas       620 Jun  5 00:24 runtime_log
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas   1576960 Jun  5 00:24 result.tar.gz
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas      8660 Jun  5 00:24 runtime_log.err
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas       663 Jun  5 00:24 ngkMDmWnDh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg4aKDmWjLCAo.diag
[2025-06-05 00:24:03] -rw-r--r-- 1 boincer umatlas     20805 Jun  5 00:24 stderr.txt
[2025-06-05 00:24:03] HITS file was successfully produced:
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas 205792574 Jun  5 00:20 shared/HITS.pool.root.1
[2025-06-05 00:24:03]  *** Contents of shared directory: ***
[2025-06-05 00:24:03] total 420508
[2025-06-05 00:24:03] -rw-r--r-- 2 boincer umatlas 222693141 Jun  4 20:38 ATLAS.root_0
[2025-06-05 00:24:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:38 start_atlas.sh
[2025-06-05 00:24:03] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 20:38 input.tar.gz
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas 205792574 Jun  5 00:20 HITS.pool.root.1
[2025-06-05 00:24:03] -rw------- 1 boincer umatlas   1576960 Jun  5 00:24 result.tar.gz
00:24:04 (42276): run_atlas exited; CPU time 44506.980505
00:24:04 (42276): called boinc_finish(0)

</stderr_txt>
]]>

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