Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-05 08:20:04 (8852): Detected: vboxwrapper 26206
2025-06-05 08:20:04 (8852): Detected: BOINC client v8.0.2
2025-06-05 08:20:05 (8852): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-05 08:20:05 (8852): Successfully copied 'init_data.xml' to the shared directory.
2025-06-05 08:20:05 (8852): Create VM. (boinc_9fe93c57bbae9788, slot#4)
2025-06-05 08:20:06 (8852): Setting Memory Size for VM. (4400MB)
2025-06-05 08:20:06 (8852): Setting CPU Count for VM. (4)
2025-06-05 08:20:06 (8852): Setting Chipset Options for VM.
2025-06-05 08:20:07 (8852): Setting Graphics Controller Options for VM.
2025-06-05 08:20:07 (8852): Setting Boot Options for VM.
2025-06-05 08:20:07 (8852): Setting Network Configuration for NAT.
2025-06-05 08:20:07 (8852): Enabling VM Network Access.
2025-06-05 08:20:08 (8852): Disabling USB Support for VM.
2025-06-05 08:20:08 (8852): Disabling COM Port Support for VM.
2025-06-05 08:20:08 (8852): Disabling LPT Port Support for VM.
2025-06-05 08:20:08 (8852): Disabling Audio Support for VM.
2025-06-05 08:20:09 (8852): Disabling Clipboard Support for VM.
2025-06-05 08:20:09 (8852): Disabling Drag and Drop Support for VM.
2025-06-05 08:20:09 (8852): Adding storage controller(s) to VM.
2025-06-05 08:20:10 (8852): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-05 08:20:12 (8852): Adding VirtualBox Guest Additions to VM.
2025-06-05 08:20:13 (8852): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-05 08:20:13 (8852): forwarding host port 60964 to guest port 80
2025-06-05 08:20:13 (8852): Enabling remote desktop for VM.
2025-06-05 08:20:13 (8852): Required extension pack not installed, remote desktop not enabled.
2025-06-05 08:20:13 (8852): Enabling shared directory for VM.
2025-06-05 08:20:14 (8852): Starting VM using VBoxManage interface. (boinc_9fe93c57bbae9788, slot#4)
2025-06-05 08:20:20 (8852): Successfully started VM. (PID = '4356')
2025-06-05 08:20:20 (8852): Reporting VM Process ID to BOINC.
2025-06-05 08:20:20 (8852): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-05 08:20:20 (8852): Guest Log: CPUID EDX: 0x178bfbff
2025-06-05 08:20:20 (8852): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-05 08:20:20 (8852): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-05 08:20:20 (8852): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-05 08:20:20 (8852): Detected: Web Application Enabled (http://localhost:60964)
2025-06-05 08:20:20 (8852): Preference change detected
2025-06-05 08:20:20 (8852): Setting CPU throttle for VM. (50%)
2025-06-05 08:20:21 (8852): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-05 08:20:22 (8852): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-05 08:20:22 (8852): Guest Log: BIOS: Booting from Hard Disk...
2025-06-05 08:20:26 (8852): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-05 08:20:26 (8852): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-05 08:20:26 (8852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-05 08:20:36 (8852): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-05 08:20:36 (8852): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-05 08:20:49 (8852): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-05 08:20:49 (8852): Guest Log: 00:00:00.000269 main     Log opened 2025-06-05T08:20:47.021608000Z
2025-06-05 08:20:49 (8852): Guest Log: 00:00:00.000407 main     OS Product: Linux
2025-06-05 08:20:49 (8852): Guest Log: 00:00:00.000446 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-05 08:20:49 (8852): Guest Log: 00:00:00.000478 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-05 08:20:49 (8852): Guest Log: 00:00:00.000515 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-05 08:20:49 (8852): Guest Log: 00:00:00.000516 main     Process ID: 1299
2025-06-05 08:20:49 (8852): Guest Log: 00:00:00.000517 main     Package type: LINUX_64BITS_GENERIC
2025-06-05 08:20:49 (8852): Guest Log: 00:00:00.001499 main     5.2.32 r132073 started. Verbose level = 0
2025-06-05 08:20:49 (8852): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-05 08:20:49 (8852): Guest Log: [INFO] Mounting shared directory
2025-06-05 08:20:49 (8852): Guest Log: [INFO] Checking for init_data.xml
2025-06-05 08:20:58 (8852): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-05 08:20:58 (8852): Guest Log: [INFO] Detected branch: prod
2025-06-05 08:20:59 (8852): Guest Log: 00:00:10.005703 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 842 312 000ns (GuestNow=1 749 104 459 183 326 000 ns GuestLast=1 749 111 647 025 638 000 ns fSetTimeLastLoop=true )
2025-06-05 08:20:59 (8852): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-05 08:20:59 (8852): Guest Log: Copying input files
2025-06-05 08:21:02 (8852): Guest Log: Copied input files into RunAtlas.
2025-06-05 08:21:02 (8852): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-05 08:21:02 (8852): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-05 08:21:02 (8852): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-05 08:21:02 (8852): Guest Log: Further information can be found at the LHC@home message board.
2025-06-05 08:21:15 (8852): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-05 08:21:15 (8852): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-05 08:21:15 (8852): Guest Log: 2.6.3.0 1575 0 32176 146809 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-05 08:21:17 (8852): Guest Log: copied the webapp to /var/www
2025-06-05 08:21:17 (8852): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-05 08:21:17 (8852): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-05 08:21:17 (8852): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-05 08:21:17 (8852): Guest Log:  *** Starting ATLAS job. (PandaID=6668313126 taskID=44871837) ***
2025-06-05 10:00:28 (8852): Status Report: Elapsed Time: '6000.000000'
2025-06-05 10:00:28 (8852): Status Report: CPU Time: '12228.671875'
2025-06-05 11:40:37 (8852): Status Report: Elapsed Time: '12000.000000'
2025-06-05 11:40:37 (8852): Status Report: CPU Time: '26651.593750'
2025-06-05 13:20:46 (8852): Status Report: Elapsed Time: '18000.000000'
2025-06-05 13:20:46 (8852): Status Report: CPU Time: '41066.359375'
2025-06-05 15:00:54 (8852): Status Report: Elapsed Time: '24000.000000'
2025-06-05 15:00:54 (8852): Status Report: CPU Time: '55488.859375'
2025-06-05 16:17:30 (8852): Guest Log:  *** Job finished ***
2025-06-05 16:17:30 (8852): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:21,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:22,747 | INFO     | [job] queue monitor thread has finished
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:23,750 | INFO     | [data] queue_monitor thread has finished
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:23,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871421347648)>', '<ExcThread(monitor, started 139870676694784)>']
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:24,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:24,829 | INFO     | [monitor] control thread has ended
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:28,922 | INFO     | all workflow threads have been joined
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:28,922 | INFO     | end of generic workflow (traces error code: 0)
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:28,923 | INFO     | traces error code: 0
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:28,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,256 [wrapper] ==== pilot stdout END ====
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,269 [wrapper] ==== wrapper stdout RESUME ====
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,281 [wrapper] pilotpid: 5905
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,294 [wrapper] Pilot exit status: 0
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,689 [wrapper] pandaids: 6668313126
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,896 [wrapper] cleanup supervisor_pilot 28967 5906
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,914 [wrapper] Test setup, not cleaning
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,926 [wrapper] apfmon messages muted
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,940 [wrapper] ==== wrapper stdout END ====
2025-06-05 16:17:30 (8852): Guest Log: 2025-06-05 14:17:29,953 [wrapper] ==== wrapper stderr END ====
2025-06-05 16:17:30 (8852): Guest Log:  *** Error codes and diagnostics ***
2025-06-05 16:17:30 (8852): Guest Log:     "exeErrorCode": 0,
2025-06-05 16:17:30 (8852): Guest Log:     "exeErrorDiag": "",
2025-06-05 16:17:30 (8852): Guest Log:     "pilotErrorCode": 0,
2025-06-05 16:17:30 (8852): Guest Log:     "pilotErrorDiag": "",
2025-06-05 16:17:30 (8852): Guest Log:  *** Listing of results directory ***
2025-06-05 16:17:30 (8852): Guest Log: total 197124
2025-06-05 16:17:30 (8852): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 09:38 pilot3.tar.gz
2025-06-05 16:17:30 (8852): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 09:40 queuedata.json
2025-06-05 16:17:30 (8852): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 09:41 runpilot2-wrapper.sh
2025-06-05 16:17:30 (8852): Guest Log: -rwxr-xr-x. 1 atlas atlas      9149 Jun  5 06:21 init_data.xml
2025-06-05 16:17:30 (8852): Guest Log: -rwxr-xr-x. 1 atlas atlas    508876 Jun  5 06:21 input.tar.gz
2025-06-05 16:17:30 (8852): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  5 06:21 start_atlas.sh
2025-06-05 16:17:30 (8852): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 06:21 EVNT.44871834._003209.pool.root.1 -> /data/./ATLAS.root_0
2025-06-05 16:17:30 (8852): Guest Log: -rw-r--r--. 1 atlas atlas      2558 Jun  5 06:21 pandaJob.out
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas    986926 Jun  5 06:22 agis_schedconf.cvmfs.json
2025-06-05 16:17:30 (8852): Guest Log: drwx------. 4 atlas atlas      4096 Jun  5 06:22 pilot3
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas 193462560 Jun  5 14:15 HITS.44871837._082216.pool.root.1
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas      1029 Jun  5 14:16 memory_monitor_summary.json
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  5 14:16 agis_ddmendpoints.agis.ALL.json
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas    403197 Jun  5 14:16 log.44871837._082216.job.log.tgz.1
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas        95 Jun  5 14:17 pilot_heartbeat.json
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas      7723 Jun  5 14:17 heartbeat.json
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  5 14:17 pilotlog.txt
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas   1907587 Jun  5 14:17 log.44871837._082216.job.log.1
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 14:17 output.list
2025-06-05 16:17:30 (8852): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  5 14:17 runtime_log
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas   2334720 Jun  5 14:17 result.tar.gz
2025-06-05 16:17:30 (8852): Guest Log: -rw-r--r--. 1 atlas atlas      8878 Jun  5 14:17 runtime_log.err
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas       752 Jun  5 14:17 E27NDm2SSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTobKDmHDqwym.diag
2025-06-05 16:17:30 (8852): Guest Log: Looking for outputfile HITS.44871837._082216.pool.root.1
2025-06-05 16:17:30 (8852): Guest Log: HITS file was successfully produced
2025-06-05 16:17:30 (8852): Guest Log: -rw-------. 1 atlas atlas 193462560 Jun  5 14:15 /home/atlas/RunAtlas/HITS.44871837._082216.pool.root.1
2025-06-05 16:17:32 (8852): Guest Log: Successfully finished the ATLAS job!
2025-06-05 16:17:32 (8852): Guest Log: Copying the results back to the shared directory!
2025-06-05 16:17:32 (8852): Guest Log:  *** Contents of shared directory: ***
2025-06-05 16:17:33 (8852): Guest Log: total 411260
2025-06-05 16:17:33 (8852): Guest Log: -rwxrwxrwx. 1 root root 224785814 Jun  5 06:20 ATLAS.root_0
2025-06-05 16:17:33 (8852): Guest Log: -rwxrwxrwx. 1 root root 193462560 Jun  5 14:17 HITS.pool.root.1
2025-06-05 16:17:33 (8852): Guest Log: -rwxrwxrwx. 1 root root      9149 Jun  5 06:20 init_data.xml
2025-06-05 16:17:33 (8852): Guest Log: -rwxrwxrwx. 1 root root    508876 Jun  5 00:30 input.tar.gz
2025-06-05 16:17:33 (8852): Guest Log: -rwxrwxrwx. 1 root root   2334720 Jun  5 14:17 result.tar.gz
2025-06-05 16:17:33 (8852): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  5 00:30 start_atlas.sh
2025-06-05 16:17:33 (8852): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-05 16:17:33 (8852): VM Completion File Detected.
2025-06-05 16:17:33 (8852): Powering off VM.
2025-06-05 16:17:34 (8852): Successfully stopped VM.
2025-06-05 16:17:34 (8852): Deregistering VM. (boinc_9fe93c57bbae9788, slot#4)
2025-06-05 16:17:34 (8852): Removing network bandwidth throttle group from VM.
2025-06-05 16:17:34 (8852): Removing VM from VirtualBox.
16:17:40 (8852): called boinc_finish(0)

</stderr_txt>
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