Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:26:44 (4142): wrapper (7.7.26015): starting
02:26:44 (4142): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:26:44] Arguments: --nthreads 8
[2025-06-05 02:26:44] Threads: 8
[2025-06-05 02:26:44] Checking for CVMFS
[2025-06-05 02:26:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:26:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:26:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:26:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:26:45] 2.11.2.0 13438 33936 100732 146799 0 201 23163599 25165825 3415 130560 0 17483181 99.799 19666958 2104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 02:26:45] CVMFS is ok
[2025-06-05 02:26:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:26:45] Checking for apptainer binary...
[2025-06-05 02:26:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:26:45] Running /usr/bin/apptainer --version
[2025-06-05 02:26:45] apptainer version 1.3.2-1.el7
[2025-06-05 02:26:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:26:46] cg-vwn353.simple-grid.lan
[2025-06-05 02:26:46] apptainer works
[2025-06-05 02:26:46] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:26:46] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:26:46] Starting ATLAS job with PandaID=6668689343
[2025-06-05 02:26:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:28:56]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:28:57] 2025-06-05 05:28:27,792 | INFO     | extracted standard info from prmon json
[2025-06-05 07:28:57] 2025-06-05 05:28:27,793 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:28:57] 2025-06-05 05:28:27,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:28:57] 2025-06-05 05:28:27,793 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:28:57] 2025-06-05 05:28:27,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:28:57] 2025-06-05 05:28:27,799 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:28:57] 2025-06-05 05:28:27,800 | INFO     | sum of square deviations: 7879803557.5
[2025-06-05 07:28:57] 2025-06-05 05:28:27,803 | INFO     | sum of deviations: -35708028811.5
[2025-06-05 07:28:57] 2025-06-05 05:28:27,803 | INFO     | mean x: 1749092222.5
[2025-06-05 07:28:57] 2025-06-05 05:28:27,803 | INFO     | mean y: 2507339.0578231295
[2025-06-05 07:28:57] 2025-06-05 05:28:27,803 | INFO     | -- intersect: 7928673901.364357
[2025-06-05 07:28:57] 2025-06-05 05:28:27,803 | INFO     | intersect: 7928673901.364357
[2025-06-05 07:28:57] 2025-06-05 05:28:27,804 | INFO     | chi2: 2.7784741241355944
[2025-06-05 07:28:57] 2025-06-05 05:28:27,805 | INFO     | sum of square deviations: 7484568240.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,807 | INFO     | sum of deviations: -15348023889.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,807 | INFO     | mean x: 1749092070.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,807 | INFO     | mean y: 2515091.038062284
[2025-06-05 07:28:57] 2025-06-05 05:28:27,808 | INFO     | -- intersect: 3589242610.0619864
[2025-06-05 07:28:57] 2025-06-05 05:28:27,808 | INFO     | intersect: 3589242610.0619864
[2025-06-05 07:28:57] 2025-06-05 05:28:27,808 | INFO     | chi2: 2.0053383775641667
[2025-06-05 07:28:57] 2025-06-05 05:28:27,808 | INFO     | current chi2=2.0053383775641667 (change=27.8259113466445 %)
[2025-06-05 07:28:57] 2025-06-05 05:28:27,809 | INFO     | sum of square deviations: 7102775035.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,811 | INFO     | sum of deviations: -14691560860.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,811 | INFO     | mean x: 1749091917.5
[2025-06-05 07:28:57] 2025-06-05 05:28:27,812 | INFO     | mean y: 2515353.852112676
[2025-06-05 07:28:57] 2025-06-05 05:28:27,812 | INFO     | -- intersect: 3620381642.599825
[2025-06-05 07:28:57] 2025-06-05 05:28:27,812 | INFO     | intersect: 3620381642.599825
[2025-06-05 07:28:57] 2025-06-05 05:28:27,812 | INFO     | chi2: 2.0051634518774533
[2025-06-05 07:28:57] 2025-06-05 05:28:27,812 | INFO     | current chi2=2.0051634518774533 (change=0.008723000999256722 %)
[2025-06-05 07:28:57] 2025-06-05 05:28:27,812 | INFO     | right removable region: 283
[2025-06-05 07:28:57] 2025-06-05 05:28:27,813 | INFO     | sum of square deviations: 7484568240.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,815 | INFO     | sum of deviations: -90033916117.99998
[2025-06-05 07:28:57] 2025-06-05 05:28:27,816 | INFO     | mean x: 1749092375.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,816 | INFO     | mean y: 2528172.837370242
[2025-06-05 07:28:57] 2025-06-05 05:28:27,816 | INFO     | -- intersect: 21042838197.906147
[2025-06-05 07:28:57] 2025-06-05 05:28:27,816 | INFO     | intersect: 21042838197.906147
[2025-06-05 07:28:57] 2025-06-05 05:28:27,816 | INFO     | chi2: 1.0311962833769484
[2025-06-05 07:28:57] 2025-06-05 05:28:27,817 | INFO     | current chi2=1.0311962833769484 (change=62.88623765039518 %)
[2025-06-05 07:28:57] 2025-06-05 05:28:27,817 | INFO     | sum of square deviations: 7102775035.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,819 | INFO     | sum of deviations: -87542383714.5
[2025-06-05 07:28:57] 2025-06-05 05:28:27,820 | INFO     | mean x: 1749092527.5
[2025-06-05 07:28:57] 2025-06-05 05:28:27,820 | INFO     | mean y: 2527156.4401408453
[2025-06-05 07:28:57] 2025-06-05 05:28:27,820 | INFO     | -- intersect: 21560260357.90703
[2025-06-05 07:28:57] 2025-06-05 05:28:27,820 | INFO     | intersect: 21560260357.90703
[2025-06-05 07:28:57] 2025-06-05 05:28:27,821 | INFO     | chi2: 1.0165826685039552
[2025-06-05 07:28:57] 2025-06-05 05:28:27,821 | INFO     | current chi2=1.0165826685039552 (change=1.417151623659532 %)
[2025-06-05 07:28:57] 2025-06-05 05:28:27,821 | INFO     | left removable region: 20
[2025-06-05 07:28:57] 2025-06-05 05:28:27,821 | INFO     | sum of square deviations: 5640782972.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,824 | INFO     | sum of deviations: -48486671609.00001
[2025-06-05 07:28:57] 2025-06-05 05:28:27,824 | INFO     | mean x: 1749092497.0
[2025-06-05 07:28:57] 2025-06-05 05:28:27,824 | INFO     | mean y: 2528643.6463878327
[2025-06-05 07:28:57] 2025-06-05 05:28:27,824 | INFO     | -- intersect: 15037262994.671305
[2025-06-05 07:28:57] 2025-06-05 05:28:27,824 | INFO     | intersect: 15037262994.671305
[2025-06-05 07:28:57] 2025-06-05 05:28:27,825 | INFO     | chi2: 0.19694044364832722
[2025-06-05 07:28:57] 2025-06-05 05:28:27,825 | INFO     | -- intersect: 15037262994.671305
[2025-06-05 07:28:57] 2025-06-05 05:28:27,825 | INFO     | current memory leak: -8.60 B/s (using 263 data points, chi2=0.20)
[2025-06-05 07:28:57] 2025-06-05 05:28:27,826 | INFO     | ..............................
[2025-06-05 07:28:57] 2025-06-05 05:28:27,826 | INFO     | . Timing measurements:
[2025-06-05 07:28:57] 2025-06-05 05:28:27,826 | INFO     | . get job = 0 s
[2025-06-05 07:28:57] 2025-06-05 05:28:27,826 | INFO     | . initial setup = 2 s
[2025-06-05 07:28:57] 2025-06-05 05:28:27,826 | INFO     | . payload setup = 13 s
[2025-06-05 07:28:57] 2025-06-05 05:28:27,827 | INFO     | . stage-in = 0 s
[2025-06-05 07:28:57] 2025-06-05 05:28:27,827 | INFO     | . payload execution = 17947 s
[2025-06-05 07:28:57] 2025-06-05 05:28:27,827 | INFO     | . stage-out = 5 s
[2025-06-05 07:28:57] 2025-06-05 05:28:27,827 | INFO     | . log creation = 1 s
[2025-06-05 07:28:57] 2025-06-05 05:28:27,827 | INFO     | ..............................
[2025-06-05 07:28:57] 2025-06-05 05:28:28,079 | INFO     | 
[2025-06-05 07:28:57] 2025-06-05 05:28:28,079 | INFO     | job summary report
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | --------------------------------------------------
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | PanDA job id: 6668689343
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | task id: 44871837
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | errors: (none)
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | pilot state: finished 
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | transexitcode: 0
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | exeerrorcode: 0
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | exeerrordiag: 
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | exitcode: 0
[2025-06-05 07:28:57] 2025-06-05 05:28:28,080 | INFO     | exitmsg: OK
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | cpuconsumptiontime: 69238 s
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | nevents: 400
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | neventsw: 0
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | pid: 16895
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | pgrp: 16895
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | corecount: 8
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | event service: False
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | sizes: {0: 2397392, 1: 2397392, 10: 2397626, 12: 2397654, 17965: 2429179, 17966: 2429178, 17972: 2438305, 17975: 2438361, 18059: 2438531}
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | --------------------------------------------------
[2025-06-05 07:28:57] 2025-06-05 05:28:28,081 | INFO     | 
[2025-06-05 07:28:57] 2025-06-05 05:28:28,082 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-05 07:28:57] 2025-06-05 05:28:28,476 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,476 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,476 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,478 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:28:57] 2025-06-05 05:28:28,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,478 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:28:57] 2025-06-05 05:28:28,478 | INFO     | job 6668689343 has completed (purged errors)
[2025-06-05 07:28:57] 2025-06-05 05:28:28,478 | INFO     | overall cleanup function is called
[2025-06-05 07:28:57] 2025-06-05 05:28:29,488 | INFO     | --- collectZombieJob: --- 10, [16895]
[2025-06-05 07:28:57] 2025-06-05 05:28:29,488 | INFO     | zombie collector waiting for pid 16895
[2025-06-05 07:28:57] 2025-06-05 05:28:29,489 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:28:57] 2025-06-05 05:28:29,489 | INFO     | collected zombie processes
[2025-06-05 07:28:57] 2025-06-05 05:28:29,489 | INFO     | will attempt to kill all subprocesses of pid=16895
[2025-06-05 07:28:57] 2025-06-05 05:28:29,638 | INFO     | process IDs to be killed: [16895] (in reverse order)
[2025-06-05 07:28:57] 2025-06-05 05:28:30,536 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:28:57] 2025-06-05 05:28:30,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:28:57] 2025-06-05 05:28:30,540 | INFO     | did not find any defunct processes belonging to 16895
[2025-06-05 07:28:57] 2025-06-05 05:28:30,543 | INFO     | did not find any defunct processes belonging to 16895
[2025-06-05 07:28:57] 2025-06-05 05:28:30,543 | INFO     | ready for new job
[2025-06-05 07:28:57] 2025-06-05 05:28:30,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:28:57] 2025-06-05 05:28:30,546 | INFO     | **************************************
[2025-06-05 07:28:57] 2025-06-05 05:28:30,546 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:28:57] 2025-06-05 05:28:30,546 | INFO     | **************************************
[2025-06-05 07:28:57] 2025-06-05 05:28:30,546 | INFO     | 
[2025-06-05 07:28:57] 2025-06-05 05:28:30,547 | INFO     | pilot is running in a VM
[2025-06-05 07:28:57] 2025-06-05 05:28:30,547 | INFO     | architecture information:
[2025-06-05 07:28:57] 2025-06-05 05:28:30,563 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:28:57] 2025-06-05 05:28:30,865 | INFO     | cat /etc/os-release:
[2025-06-05 07:28:57] NAME="CentOS Linux"
[2025-06-05 07:28:57] VERSION="7 (Core)"
[2025-06-05 07:28:57] ID="centos"
[2025-06-05 07:28:57] ID_LIKE="rhel fedora"
[2025-06-05 07:28:57] VERSION_ID="7"
[2025-06-05 07:28:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:28:57] ANSI_COLOR="0;31"
[2025-06-05 07:28:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:28:57] HOME_URL="https://www.centos.org/"
[2025-06-05 07:28:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:28:57] 
[2025-06-05 07:28:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:28:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:28:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:28:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:28:57] 
[2025-06-05 07:28:57] 2025-06-05 05:28:30,865 | INFO     | **************************************
[2025-06-05 07:28:57] 2025-06-05 05:28:31,367 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-05 07:28:57] 2025-06-05 05:28:31,658 | INFO     | sufficient remaining disk space (497048092672 B)
[2025-06-05 07:28:57] 2025-06-05 05:28:31,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:28:57] 2025-06-05 05:28:31,659 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:28:57] 2025-06-05 05:28:31,659 | INFO     | update_server=False
[2025-06-05 07:28:57] 2025-06-05 05:28:31,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:28:57] 2025-06-05 05:28:31,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:28:57] 2025-06-05 05:28:31,665 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 07:28:57] 2025-06-05 05:28:31,666 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:28:57] 2025-06-05 05:28:31,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:28:57] 2025-06-05 05:28:31,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:28:57] 2025-06-05 05:28:31,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:28:57] 2025-06-05 05:28:32,310 | INFO     | all payload control threads have been joined
[2025-06-05 07:28:57] 2025-06-05 05:28:32,346 | INFO     | all job control threads have been joined
[2025-06-05 07:28:57] 2025-06-05 05:28:32,411 | INFO     | all data control threads have been joined
[2025-06-05 07:28:57] 2025-06-05 05:28:32,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:28:57] 2025-06-05 05:28:32,475 | INFO     | aborting loop
[2025-06-05 07:28:57] 2025-06-05 05:28:32,665 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:32,691 | INFO     | [job] validate thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:32,703 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:32,914 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:32,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:28:57] 2025-06-05 05:28:33,222 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,316 | INFO     | [payload] control thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,352 | INFO     | [job] control thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,418 | INFO     | [data] control thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,480 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,637 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,679 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,687 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,755 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:33,994 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:35,668 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:28:57] 2025-06-05 05:28:36,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926278690624)>', '<ExcThread(monitor, started 139925823395584)>']
[2025-06-05 07:28:57] 2025-06-05 05:28:36,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:28:57] 2025-06-05 05:28:36,696 | INFO     | [monitor] control thread has ended
[2025-06-05 07:28:57] 2025-06-05 05:28:41,666 | INFO     | all workflow threads have been joined
[2025-06-05 07:28:57] 2025-06-05 05:28:41,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:28:57] 2025-06-05 05:28:41,667 | INFO     | traces error code: 0
[2025-06-05 07:28:57] 2025-06-05 05:28:41,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:28:57] 2025-06-05 05:28:41,978 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:28:57] 2025-06-05 05:28:42,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:28:57] 2025-06-05 05:28:42,146 [wrapper] pilotpid: 9841
[2025-06-05 07:28:57] 2025-06-05 05:28:42,257 [wrapper] Pilot exit status: 0
[2025-06-05 07:28:57] 2025-06-05 05:28:42,784 [wrapper] pandaids: 6668689343
[2025-06-05 07:28:57] 2025-06-05 05:28:43,517 [wrapper] cleanup supervisor_pilot 20837 9842
[2025-06-05 07:28:57] 2025-06-05 05:28:43,619 [wrapper] Test setup, not cleaning
[2025-06-05 07:28:57] 2025-06-05 05:28:43,670 [wrapper] apfmon messages muted
[2025-06-05 07:28:57] 2025-06-05 05:28:43,764 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:28:57] 2025-06-05 05:28:43,843 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:28:57]  *** Error codes and diagnostics ***
[2025-06-05 07:28:57]     "exeErrorCode": 0,
[2025-06-05 07:28:57]     "exeErrorDiag": "",
[2025-06-05 07:28:57]     "pilotErrorCode": 0,
[2025-06-05 07:28:57]     "pilotErrorDiag": "",
[2025-06-05 07:28:57]  *** Listing of results directory ***
[2025-06-05 07:28:57] total 419312
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc    495897 May 28 18:47 pilot3.tar.gz
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc      5111 May 28 19:04 queuedata.json
[2025-06-05 07:28:57] -rwx------. 1 boinc boinc     37140 May 28 19:05 runpilot2-wrapper.sh
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc       100 Jun  5 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:28:57] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 02:26 run_atlas
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc       105 Jun  5 02:26 job.xml
[2025-06-05 07:28:57] -rw-r--r--. 2 boinc boinc 227594094 Jun  5 02:26 EVNT.44871834._003408.pool.root.1
[2025-06-05 07:28:57] -rw-r--r--. 2 boinc boinc    508877 Jun  5 02:26 input.tar.gz
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc      6393 Jun  5 02:26 init_data.xml
[2025-06-05 07:28:57] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:26 start_atlas.sh
[2025-06-05 07:28:57] drwxrwx--x. 2 boinc boinc        68 Jun  5 02:26 shared
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc         0 Jun  5 02:26 boinc_lockfile
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc      2558 Jun  5 02:26 pandaJob.out
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc    987117 Jun  5 02:27 agis_schedconf.cvmfs.json
[2025-06-05 07:28:57] drwx------. 4 boinc boinc      4096 Jun  5 02:27 pilot3
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc 194060021 Jun  5 07:25 HITS.44871837._087481.pool.root.1
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc       531 Jun  5 07:25 boinc_task_state.xml
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc      1014 Jun  5 07:26 memory_monitor_summary.json
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc   1598969 Jun  5 07:26 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc    412179 Jun  5 07:26 log.44871837._087481.job.log.tgz.1
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc      7684 Jun  5 07:28 heartbeat.json
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc        95 Jun  5 07:28 pilot_heartbeat.json
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc      4540 Jun  5 07:28 pilotlog.txt
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc   1541072 Jun  5 07:28 log.44871837._087481.job.log.1
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc       357 Jun  5 07:28 output.list
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc       620 Jun  5 07:28 runtime_log
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc   1976320 Jun  5 07:28 result.tar.gz
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc      8673 Jun  5 07:28 runtime_log.err
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc       656 Jun  5 07:28 ezSMDmSOZe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmToTKDmmWZQMm.diag
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc      8192 Jun  5 07:28 boinc_mmap_file
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc        28 Jun  5 07:28 wrapper_checkpoint.txt
[2025-06-05 07:28:57] -rw-r--r--. 1 boinc boinc     20480 Jun  5 07:28 stderr.txt
[2025-06-05 07:28:57] HITS file was successfully produced:
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc 194060021 Jun  5 07:25 shared/HITS.pool.root.1
[2025-06-05 07:28:57]  *** Contents of shared directory: ***
[2025-06-05 07:28:57] total 414220
[2025-06-05 07:28:57] -rw-r--r--. 2 boinc boinc 227594094 Jun  5 02:26 ATLAS.root_0
[2025-06-05 07:28:57] -rw-r--r--. 2 boinc boinc    508877 Jun  5 02:26 input.tar.gz
[2025-06-05 07:28:57] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:26 start_atlas.sh
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc 194060021 Jun  5 07:25 HITS.pool.root.1
[2025-06-05 07:28:57] -rw-------. 1 boinc boinc   1976320 Jun  5 07:28 result.tar.gz
07:28:58 (4142): run_atlas exited; CPU time 69465.844344
07:28:58 (4142): called boinc_finish(0)

</stderr_txt>
]]>

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