Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:01 (2667506): wrapper (7.7.26015): starting
09:35:01 (2667506): wrapper: running run_atlas (--nthreads 6)
[2025-06-05 09:35:01] Arguments: --nthreads 6
[2025-06-05 09:35:01] Threads: 6
[2025-06-05 09:35:01] Checking for CVMFS
[2025-06-05 09:35:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:35:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:35:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:35:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:35:02] 2.11.5.0 2650211 10 47376 146799 2 186 48157060 52428801 885 130560 0 44856 99.983 1373 31 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 09:35:02] CVMFS is ok
[2025-06-05 09:35:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:35:02] Checking for apptainer binary...
[2025-06-05 09:35:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:35:02] Running /usr/bin/apptainer --version
[2025-06-05 09:35:02] apptainer version 1.3.5-1.el9
[2025-06-05 09:35:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:35:02] testio008
[2025-06-05 09:35:02] apptainer works
[2025-06-05 09:35:02] Set ATHENA_PROC_NUMBER=6
[2025-06-05 09:35:02] Set ATHENA_CORE_NUMBER=6
[2025-06-05 09:35:02] Starting ATLAS job with PandaID=6667885872
[2025-06-05 09:35:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:17:22]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:17:22] 2025-06-05 02:16:18,585 | INFO     | monitor loop #461: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:18,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:21,087 | INFO     | monitor loop #462: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:21,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:23,590 | INFO     | monitor loop #463: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:23,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:26,093 | INFO     | monitor loop #464: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:26,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:28,596 | INFO     | monitor loop #465: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:28,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:31,099 | INFO     | monitor loop #466: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:31,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:33,602 | INFO     | monitor loop #467: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:33,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:35,671 | INFO     | PID=2671523 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 11:17:22] 2025-06-05 02:16:36,105 | INFO     | monitor loop #468: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:36,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:38,608 | INFO     | monitor loop #469: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:38,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:41,111 | INFO     | monitor loop #470: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:41,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:43,615 | INFO     | monitor loop #471: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:43,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:46,117 | INFO     | monitor loop #472: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:46,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:48,620 | INFO     | monitor loop #473: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:48,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:51,123 | INFO     | monitor loop #474: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:51,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:53,626 | INFO     | monitor loop #475: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:53,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:54,717 | INFO     | 6054s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 11:17:22] 2025-06-05 02:16:56,129 | INFO     | monitor loop #476: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:56,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:16:57,774 | INFO     | PID=2671523 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 11:17:22] 2025-06-05 02:16:58,632 | INFO     | monitor loop #477: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:16:58,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:17:01,135 | INFO     | monitor loop #478: job 0:6667885872 is in state 'finished'
[2025-06-05 11:17:22] 2025-06-05 02:17:01,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:17:22] 2025-06-05 02:17:02,898 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 11:17:22] 2025-06-05 02:17:02,898 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6667885872/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:17:22] 2025-06-05 02:17:02,899 | INFO     | extracted standard info from prmon json
[2025-06-05 11:17:22] 2025-06-05 02:17:02,899 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:17:22] 2025-06-05 02:17:02,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:17:22] 2025-06-05 02:17:02,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:17:22] 2025-06-05 02:17:02,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:17:22] 2025-06-05 02:17:02,901 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:17:22] 2025-06-05 02:17:02,901 | INFO     | sum of square deviations: 233641590.0
[2025-06-05 11:17:22] 2025-06-05 02:17:02,902 | INFO     | sum of deviations: 11894516697.000002
[2025-06-05 11:17:22] 2025-06-05 02:17:02,902 | INFO     | mean x: 1749086834.0
[2025-06-05 11:17:22] 2025-06-05 02:17:02,902 | INFO     | mean y: 2426628.714285714
[2025-06-05 11:17:22] 2025-06-05 02:17:02,902 | INFO     | -- intersect: -89042261654.37723
[2025-06-05 11:17:22] 2025-06-05 02:17:02,902 | INFO     | intersect: -89042261654.37723
[2025-06-05 11:17:22] 2025-06-05 02:17:02,902 | INFO     | chi2: 1.523449855936776
[2025-06-05 11:17:22] 2025-06-05 02:17:02,902 | INFO     | -- intersect: -89042261654.37723
[2025-06-05 11:17:22] 2025-06-05 02:17:02,902 | INFO     | current memory leak: 50.91 B/s (using 91 data points, chi2=1.52)
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | ..............................
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | . Timing measurements:
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | . get job = 0 s
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | . initial setup = 4 s
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | . payload setup = 3 s
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | . stage-in = 0 s
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | . payload execution = 5954 s
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | . stage-out = 0 s
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | . log creation = 0 s
[2025-06-05 11:17:22] 2025-06-05 02:17:02,903 | INFO     | ..............................
[2025-06-05 11:17:22] 2025-06-05 02:17:02,988 | INFO     | 
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | job summary report
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | --------------------------------------------------
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | PanDA job id: 6667885872
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | task id: 44871837
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | errors: (none)
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | pilot state: finished 
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | transexitcode: 0
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | exeerrorcode: 0
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | exeerrordiag: 
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | exitcode: 0
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | exitmsg: OK
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | cpuconsumptiontime: 30954 s
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | nevents: 400
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | neventsw: 0
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | pid: 2678141
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | pgrp: 2678141
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | corecount: 6
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | event service: False
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | sizes: {0: 2397221, 1: 2397420, 4: 2397626, 11: 2397654, 5960: 2424294, 5961: 2424293, 5962: 2433418, 5965: 2433474, 6045: 2433644}
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | --------------------------------------------------
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | 
[2025-06-05 11:17:22] 2025-06-05 02:17:02,989 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | job 6667885872 has completed (purged errors)
[2025-06-05 11:17:22] 2025-06-05 02:17:03,004 | INFO     | overall cleanup function is called
[2025-06-05 11:17:22] 2025-06-05 02:17:04,011 | INFO     | --- collectZombieJob: --- 10, [2678141]
[2025-06-05 11:17:22] 2025-06-05 02:17:04,011 | INFO     | zombie collector waiting for pid 2678141
[2025-06-05 11:17:22] 2025-06-05 02:17:04,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:17:22] 2025-06-05 02:17:04,012 | INFO     | collected zombie processes
[2025-06-05 11:17:22] 2025-06-05 02:17:04,012 | INFO     | will attempt to kill all subprocesses of pid=2678141
[2025-06-05 11:17:22] 2025-06-05 02:17:04,074 | INFO     | process IDs to be killed: [2678141] (in reverse order)
[2025-06-05 11:17:22] 2025-06-05 02:17:04,111 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:17:22] 2025-06-05 02:17:04,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:17:22] 2025-06-05 02:17:04,115 | INFO     | did not find any defunct processes belonging to 2678141
[2025-06-05 11:17:22] 2025-06-05 02:17:04,118 | INFO     | did not find any defunct processes belonging to 2678141
[2025-06-05 11:17:22] 2025-06-05 02:17:04,118 | INFO     | ready for new job
[2025-06-05 11:17:22] 2025-06-05 02:17:04,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:17:22] 2025-06-05 02:17:04,120 | INFO     | **************************************
[2025-06-05 11:17:22] 2025-06-05 02:17:04,120 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:17:22] 2025-06-05 02:17:04,120 | INFO     | **************************************
[2025-06-05 11:17:22] 2025-06-05 02:17:04,121 | INFO     | 
[2025-06-05 11:17:22] 2025-06-05 02:17:04,122 | INFO     | architecture information:
[2025-06-05 11:17:22] 2025-06-05 02:17:04,122 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:17:22] 2025-06-05 02:17:04,136 | INFO     | cat /etc/os-release:
[2025-06-05 11:17:22] NAME="CentOS Linux"
[2025-06-05 11:17:22] VERSION="7 (Core)"
[2025-06-05 11:17:22] ID="centos"
[2025-06-05 11:17:22] ID_LIKE="rhel fedora"
[2025-06-05 11:17:22] VERSION_ID="7"
[2025-06-05 11:17:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:17:22] ANSI_COLOR="0;31"
[2025-06-05 11:17:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:17:22] HOME_URL="https://www.centos.org/"
[2025-06-05 11:17:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:17:22] 
[2025-06-05 11:17:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:17:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:17:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:17:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:17:22] 
[2025-06-05 11:17:22] 2025-06-05 02:17:04,136 | INFO     | **************************************
[2025-06-05 11:17:22] 2025-06-05 02:17:04,639 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-05 11:17:22] 2025-06-05 02:17:04,652 | INFO     | sufficient remaining disk space (278457745408 B)
[2025-06-05 11:17:22] 2025-06-05 02:17:04,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:17:22] 2025-06-05 02:17:04,653 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:17:22] 2025-06-05 02:17:04,653 | INFO     | update_server=False
[2025-06-05 11:17:22] 2025-06-05 02:17:04,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:17:22] 2025-06-05 02:17:04,653 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 11:17:22] 2025-06-05 02:17:04,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:17:22] 2025-06-05 02:17:04,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:17:22] 2025-06-05 02:17:04,654 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:17:22] 2025-06-05 02:17:04,654 | INFO     | aborting loop
[2025-06-05 11:17:22] 2025-06-05 02:17:04,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:17:22] 2025-06-05 02:17:04,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:17:22] 2025-06-05 02:17:04,814 | INFO     | all job control threads have been joined
[2025-06-05 11:17:22] 2025-06-05 02:17:05,602 | INFO     | all data control threads have been joined
[2025-06-05 11:17:22] 2025-06-05 02:17:05,658 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:05,659 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:05,659 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:05,736 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:05,819 | INFO     | [job] control thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:05,849 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:05,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:17:22] 2025-06-05 02:17:06,037 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:06,081 | INFO     | all payload control threads have been joined
[2025-06-05 11:17:22] 2025-06-05 02:17:06,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:17:22] 2025-06-05 02:17:06,607 | INFO     | [data] control thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:06,736 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:06,776 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:06,967 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:07,086 | INFO     | [payload] control thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:07,103 | INFO     | [job] validate thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:07,900 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:10,220 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:15,071 | INFO     | job.realtimelogging is not enabled
[2025-06-05 11:17:22] 2025-06-05 02:17:16,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:17:22] 2025-06-05 02:17:17,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161217521472)>', '<ExcThread(monitor, started 140160721204992)>']
[2025-06-05 11:17:22] 2025-06-05 02:17:17,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:17:22] 2025-06-05 02:17:17,718 | INFO     | [monitor] control thread has ended
[2025-06-05 11:17:22] 2025-06-05 02:17:22,027 | INFO     | all workflow threads have been joined
[2025-06-05 11:17:22] 2025-06-05 02:17:22,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:17:22] 2025-06-05 02:17:22,028 | INFO     | traces error code: 0
[2025-06-05 11:17:22] 2025-06-05 02:17:22,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:17:22] 2025-06-05 02:17:22,155 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:17:22] 2025-06-05 02:17:22,159 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:17:22] 2025-06-05 02:17:22,160 [wrapper] pilotpid: 2671523
[2025-06-05 11:17:22] 2025-06-05 02:17:22,162 [wrapper] Pilot exit status: 0
[2025-06-05 11:17:22] 2025-06-05 02:17:22,166 [wrapper] pandaids: 6667885872
[2025-06-05 11:17:22] 2025-06-05 02:17:22,179 [wrapper] cleanup supervisor_pilot 2697368 2671524
[2025-06-05 11:17:22] 2025-06-05 02:17:22,181 [wrapper] Test setup, not cleaning
[2025-06-05 11:17:22] 2025-06-05 02:17:22,182 [wrapper] apfmon messages muted
[2025-06-05 11:17:22] 2025-06-05 02:17:22,184 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:17:22] 2025-06-05 02:17:22,185 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:17:22]  *** Error codes and diagnostics ***
[2025-06-05 11:17:22]     "exeErrorCode": 0,
[2025-06-05 11:17:22]     "exeErrorDiag": "",
[2025-06-05 11:17:22]     "pilotErrorCode": 0,
[2025-06-05 11:17:22]     "pilotErrorDiag": "",
[2025-06-05 11:17:22]  *** Listing of results directory ***
[2025-06-05 11:17:22] total 412244
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc    495897 May 28 11:39 pilot3.tar.gz
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc      5111 May 28 11:50 queuedata.json
[2025-06-05 11:17:22] -rwx------. 1 boinc boinc     37140 May 28 11:53 runpilot2-wrapper.sh
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc       100 Jun  5 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:17:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 09:35 run_atlas
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc       105 Jun  5 09:35 job.xml
[2025-06-05 11:17:22] -rw-r--r--. 2 boinc boinc     15093 Jun  5 09:35 start_atlas.sh
[2025-06-05 11:17:22] drwxrwx--x. 2 boinc boinc        68 Jun  5 09:35 shared
[2025-06-05 11:17:22] -rw-r--r--. 2 boinc boinc    508885 Jun  5 09:35 input.tar.gz
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc      9509 Jun  5 09:35 init_data.xml
[2025-06-05 11:17:22] -rw-r--r--. 2 boinc boinc 222473742 Jun  5 09:35 EVNT.44871834._003036.pool.root.1
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc         0 Jun  5 09:35 boinc_lockfile
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc      2559 Jun  5 09:35 pandaJob.out
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc    987117 Jun  5 09:36 agis_schedconf.cvmfs.json
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc   1598969 Jun  5 09:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:17:22] drwx------. 4 boinc boinc      4096 Jun  5 09:36 pilot3
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc 194071528 Jun  5 11:15 HITS.44871837._077607.pool.root.1
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc      1014 Jun  5 11:15 memory_monitor_summary.json
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc    299915 Jun  5 11:15 log.44871837._077607.job.log.tgz.1
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc       529 Jun  5 11:15 boinc_task_state.xml
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc        95 Jun  5 11:16 pilot_heartbeat.json
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc      7665 Jun  5 11:17 heartbeat.json
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc      8192 Jun  5 11:17 boinc_mmap_file
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc        27 Jun  5 11:17 wrapper_checkpoint.txt
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc      4549 Jun  5 11:17 pilotlog.txt
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc    587006 Jun  5 11:17 log.44871837._077607.job.log.1
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc       357 Jun  5 11:17 output.list
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc       620 Jun  5 11:17 runtime_log
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc    901120 Jun  5 11:17 result.tar.gz
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc      8617 Jun  5 11:17 runtime_log.err
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc       641 Jun  5 11:17 9jJODmk5Le7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr4aKDmO0tvBn.diag
[2025-06-05 11:17:22] -rw-r--r--. 1 boinc boinc     22184 Jun  5 11:17 stderr.txt
[2025-06-05 11:17:22] HITS file was successfully produced:
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc 194071528 Jun  5 11:15 shared/HITS.pool.root.1
[2025-06-05 11:17:22]  *** Contents of shared directory: ***
[2025-06-05 11:17:22] total 408180
[2025-06-05 11:17:22] -rw-r--r--. 2 boinc boinc     15093 Jun  5 09:35 start_atlas.sh
[2025-06-05 11:17:22] -rw-r--r--. 2 boinc boinc    508885 Jun  5 09:35 input.tar.gz
[2025-06-05 11:17:22] -rw-r--r--. 2 boinc boinc 222473742 Jun  5 09:35 ATLAS.root_0
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc 194071528 Jun  5 11:15 HITS.pool.root.1
[2025-06-05 11:17:22] -rw-------. 1 boinc boinc    901120 Jun  5 11:17 result.tar.gz
11:17:24 (2667506): run_atlas exited; CPU time 30991.140123
11:17:24 (2667506): called boinc_finish(0)

</stderr_txt>
]]>

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