Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:05:05 (29405): wrapper (7.7.26015): starting
20:05:05 (29405): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 20:05:05] Arguments: --nthreads 12
[2025-06-04 20:05:05] Threads: 12
[2025-06-04 20:05:05] Checking for CVMFS
[2025-06-04 20:05:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:05:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:05:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:05:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:05:06] 2.11.2.0 2933 36379 89428 146798 1 1 18964364 20275200 1 130560 0 16241254 99.983 6310200 7720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 20:05:06] CVMFS is ok
[2025-06-04 20:05:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:05:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:05:06] Further information can be found at the LHC@home message board.
[2025-06-04 20:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:05:06] Checking for apptainer binary...
[2025-06-04 20:05:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:05:06] Running /usr/bin/apptainer --version
[2025-06-04 20:05:06] apptainer version 1.3.2-1.el7
[2025-06-04 20:05:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:05:07] c-205-15.aglt2.org
[2025-06-04 20:05:07] apptainer works
[2025-06-04 20:05:07] Set ATHENA_PROC_NUMBER=12
[2025-06-04 20:05:07] Set ATHENA_CORE_NUMBER=12
[2025-06-04 20:05:07] Starting ATLAS job with PandaID=6680207877
[2025-06-04 20:05:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:35:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:35:56]  status=None
[2025-06-04 21:35:56]  status_code=0
[2025-06-04 21:35:56]  storage_token=
[2025-06-04 21:35:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680207877/log.44871837._102259.job.log.tgz.1
[2025-06-04 21:35:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/21/log.44871837._102259.job.log.tgz.1
[2025-06-04 21:35:56]  workdir=None
[2025-06-04 21:35:56] ]
[2025-06-04 21:35:56] 2025-06-05 01:35:31,660 | INFO     | transferring file log.44871837._102259.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680207877/log.44871837._102259.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 21:35:56] 2025-06-05 01:35:31,660 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680207877/log.44871837._102259.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._102259.job
[2025-06-04 21:35:56] 2025-06-05 01:35:31,682 | INFO     | adding to output.list: log.44871837._102259.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/21/log.44871837._102259.job.log.tg
[2025-06-04 21:35:56] 2025-06-05 01:35:31,682 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:35:56] 2025-06-05 01:35:31,683 | INFO     | summary of transferred files:
[2025-06-04 21:35:56] 2025-06-05 01:35:31,683 | INFO     |  -- lfn=log.44871837._102259.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:35:56] 2025-06-05 01:35:31,683 | INFO     | stage-out finished correctly
[2025-06-04 21:35:56] 2025-06-05 01:35:32,411 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:35:56] 2025-06-05 01:35:32,493 | INFO     | job 6680207877 has state=finished
[2025-06-04 21:35:56] 2025-06-05 01:35:32,494 | INFO     | preparing for final server update for job 6680207877 in state='finished'
[2025-06-04 21:35:56] 2025-06-05 01:35:32,494 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:35:56] 2025-06-05 01:35:32,494 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:35:56] 2025-06-05 01:35:32,495 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:35:56] 2025-06-05 01:35:32,495 | INFO     | job 6680207877 has finished - writing final server update
[2025-06-04 21:35:56] 2025-06-05 01:35:32,495 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:35:56] 2025-06-05 01:35:32,496 | INFO     | executing command: lscpu
[2025-06-04 21:35:56] 2025-06-05 01:35:32,523 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:35:56] 2025-06-05 01:35:34,588 | WARNING  | process 7469 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 21:35:56] 2025-06-05 01:35:34,588 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680207877/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:35:56] 2025-06-05 01:35:34,589 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680207877/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:35:56] 2025-06-05 01:35:34,590 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3761211 B
[2025-06-04 21:35:56] 2025-06-05 01:35:34,590 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16024 B
[2025-06-04 21:35:56] 2025-06-05 01:35:34,590 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:35:56] 2025-06-05 01:35:37,157 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 21:35:56] 2025-06-05 01:35:37,158 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680207877/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,163 | INFO     | extracted standard info from prmon json
[2025-06-04 21:35:56] 2025-06-05 01:35:37,163 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:35:56] 2025-06-05 01:35:37,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:35:56] 2025-06-05 01:35:37,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:35:56] 2025-06-05 01:35:37,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:35:56] 2025-06-05 01:35:37,167 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:35:56] 2025-06-05 01:35:37,167 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 21:35:56] 2025-06-05 01:35:37,167 | INFO     | sum of deviations: -1102138422.9999993
[2025-06-04 21:35:56] 2025-06-05 01:35:37,168 | INFO     | mean x: 1749084728.5
[2025-06-04 21:35:56] 2025-06-05 01:35:37,168 | INFO     | mean y: 2689867.2195121953
[2025-06-04 21:35:56] 2025-06-05 01:35:37,168 | INFO     | -- intersect: 11279638532.01441
[2025-06-04 21:35:56] 2025-06-05 01:35:37,168 | INFO     | intersect: 11279638532.01441
[2025-06-04 21:35:56] 2025-06-05 01:35:37,168 | INFO     | chi2: 0.031727843223694534
[2025-06-04 21:35:56] 2025-06-05 01:35:37,168 | INFO     | -- intersect: 11279638532.01441
[2025-06-04 21:35:56] 2025-06-05 01:35:37,169 | INFO     | current memory leak: -6.45 B/s (using 82 data points, chi2=0.03)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,169 | INFO     | ..............................
[2025-06-04 21:35:56] 2025-06-05 01:35:37,169 | INFO     | . Timing measurements:
[2025-06-04 21:35:56] 2025-06-05 01:35:37,169 | INFO     | . get job = 0 s
[2025-06-04 21:35:56] 2025-06-05 01:35:37,169 | INFO     | . initial setup = 2 s
[2025-06-04 21:35:56] 2025-06-05 01:35:37,169 | INFO     | . payload setup = 9 s
[2025-06-04 21:35:56] 2025-06-05 01:35:37,170 | INFO     | . stage-in = 0 s
[2025-06-04 21:35:56] 2025-06-05 01:35:37,170 | INFO     | . payload execution = 5377 s
[2025-06-04 21:35:56] 2025-06-05 01:35:37,170 | INFO     | . stage-out = 0 s
[2025-06-04 21:35:56] 2025-06-05 01:35:37,170 | INFO     | . log creation = 0 s
[2025-06-04 21:35:56] 2025-06-05 01:35:37,170 | INFO     | ..............................
[2025-06-04 21:35:56] 2025-06-05 01:35:37,180 | INFO     | sufficient remaining disk space (29382148096 B)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,185 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,259 | INFO     | 
[2025-06-04 21:35:56] 2025-06-05 01:35:37,259 | INFO     | job summary report
[2025-06-04 21:35:56] 2025-06-05 01:35:37,259 | INFO     | --------------------------------------------------
[2025-06-04 21:35:56] 2025-06-05 01:35:37,259 | INFO     | PanDA job id: 6680207877
[2025-06-04 21:35:56] 2025-06-05 01:35:37,259 | INFO     | task id: 44871837
[2025-06-04 21:35:56] 2025-06-05 01:35:37,259 | INFO     | errors: (none)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:35:56] 2025-06-05 01:35:37,259 | INFO     | pilot state: finished 
[2025-06-04 21:35:56] 2025-06-05 01:35:37,260 | INFO     | transexitcode: 0
[2025-06-04 21:35:56] 2025-06-05 01:35:37,260 | INFO     | exeerrorcode: 0
[2025-06-04 21:35:56] 2025-06-05 01:35:37,260 | INFO     | exeerrordiag: 
[2025-06-04 21:35:56] 2025-06-05 01:35:37,260 | INFO     | exitcode: 0
[2025-06-04 21:35:56] 2025-06-05 01:35:37,260 | INFO     | exitmsg: OK
[2025-06-04 21:35:56] 2025-06-05 01:35:37,260 | INFO     | cpuconsumptiontime: 58714 s
[2025-06-04 21:35:56] 2025-06-05 01:35:37,260 | INFO     | nevents: 400
[2025-06-04 21:35:56] 2025-06-05 01:35:37,260 | INFO     | neventsw: 0
[2025-06-04 21:35:56] 2025-06-05 01:35:37,261 | INFO     | pid: 7469
[2025-06-04 21:35:56] 2025-06-05 01:35:37,261 | INFO     | pgrp: 7469
[2025-06-04 21:35:56] 2025-06-05 01:35:37,261 | INFO     | corecount: 12
[2025-06-04 21:35:56] 2025-06-05 01:35:37,261 | INFO     | event service: False
[2025-06-04 21:35:56] 2025-06-05 01:35:37,261 | INFO     | sizes: {0: 2397289, 5: 2397495, 11: 2397551, 5390: 2423910, 5391: 2423909, 5393: 2432906, 5394: 2433090, 5398: 2433260}
[2025-06-04 21:35:56] 2025-06-05 01:35:37,261 | INFO     | --------------------------------------------------
[2025-06-04 21:35:56] 2025-06-05 01:35:37,261 | INFO     | 
[2025-06-04 21:35:56] 2025-06-05 01:35:37,261 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 21:35:56] 2025-06-05 01:35:37,265 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6680207877: 4065659 B (within 2537553920 B limit)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,266 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6680207877/HITS.44871837._102259.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,267 | INFO     | total size of present files: 0 B (workdir size: 4065659 B)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,267 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6680207877/HITS.44871837._102259.pool.root.1 since it does not exist
[2025-06-04 21:35:56] 2025-06-05 01:35:37,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,281 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:35:56] 2025-06-05 01:35:37,285 | INFO     | job 6680207877 has completed (purged errors)
[2025-06-04 21:35:56] 2025-06-05 01:35:37,285 | INFO     | overall cleanup function is called
[2025-06-04 21:35:56] 2025-06-05 01:35:37,363 | INFO     | number of running child processes to parent process 7469: 1
[2025-06-04 21:35:56] 2025-06-05 01:35:37,363 | INFO     | maximum number of monitored processes: 6
[2025-06-04 21:35:56] 2025-06-05 01:35:37,363 | INFO     | aborting job monitoring since job object (job id=6680207877) has expired
[2025-06-04 21:35:56] 2025-06-05 01:35:38,294 | INFO     | --- collectZombieJob: --- 10, [7469]
[2025-06-04 21:35:56] 2025-06-05 01:35:38,294 | INFO     | zombie collector waiting for pid 7469
[2025-06-04 21:35:56] 2025-06-05 01:35:38,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:35:56] 2025-06-05 01:35:38,294 | INFO     | collected zombie processes
[2025-06-04 21:35:56] 2025-06-05 01:35:38,295 | INFO     | will attempt to kill all subprocesses of pid=7469
[2025-06-04 21:35:56] 2025-06-05 01:35:38,384 | INFO     | process IDs to be killed: [7469] (in reverse order)
[2025-06-04 21:35:56] 2025-06-05 01:35:38,433 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:35:56] 2025-06-05 01:35:38,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:35:56] 2025-06-05 01:35:38,436 | INFO     | did not find any defunct processes belonging to 7469
[2025-06-04 21:35:56] 2025-06-05 01:35:38,438 | INFO     | did not find any defunct processes belonging to 7469
[2025-06-04 21:35:56] 2025-06-05 01:35:38,438 | INFO     | ready for new job
[2025-06-04 21:35:56] 2025-06-05 01:35:38,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:35:56] 2025-06-05 01:35:38,440 | INFO     | **************************************
[2025-06-04 21:35:56] 2025-06-05 01:35:38,440 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:35:56] 2025-06-05 01:35:38,440 | INFO     | **************************************
[2025-06-04 21:35:56] 2025-06-05 01:35:38,440 | INFO     | 
[2025-06-04 21:35:56] 2025-06-05 01:35:38,441 | INFO     | architecture information:
[2025-06-04 21:35:56] 2025-06-05 01:35:38,441 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:35:56] 2025-06-05 01:35:38,455 | INFO     | cat /etc/os-release:
[2025-06-04 21:35:56] NAME="CentOS Linux"
[2025-06-04 21:35:56] VERSION="7 (Core)"
[2025-06-04 21:35:56] ID="centos"
[2025-06-04 21:35:56] ID_LIKE="rhel fedora"
[2025-06-04 21:35:56] VERSION_ID="7"
[2025-06-04 21:35:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:35:56] ANSI_COLOR="0;31"
[2025-06-04 21:35:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:35:56] HOME_URL="https://www.centos.org/"
[2025-06-04 21:35:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:35:56] 
[2025-06-04 21:35:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:35:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:35:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:35:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:35:56] 
[2025-06-04 21:35:56] 2025-06-05 01:35:38,455 | INFO     | **************************************
[2025-06-04 21:35:56] 2025-06-05 01:35:38,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 21:35:56] 2025-06-05 01:35:38,975 | INFO     | sufficient remaining disk space (29386342400 B)
[2025-06-04 21:35:56] 2025-06-05 01:35:38,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:35:56] 2025-06-05 01:35:38,976 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:35:56] 2025-06-05 01:35:38,976 | INFO     | update_server=False
[2025-06-04 21:35:56] 2025-06-05 01:35:38,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:35:56] 2025-06-05 01:35:38,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:35:56] 2025-06-05 01:35:38,977 | INFO     | aborting loop
[2025-06-04 21:35:56] 2025-06-05 01:35:38,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:35:56] 2025-06-05 01:35:38,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:35:56] 2025-06-05 01:35:39,144 | INFO     | all job control threads have been joined
[2025-06-04 21:35:56] 2025-06-05 01:35:39,152 | INFO     | all data control threads have been joined
[2025-06-04 21:35:56] 2025-06-05 01:35:39,252 | INFO     | all payload control threads have been joined
[2025-06-04 21:35:56] 2025-06-05 01:35:39,553 | INFO     | PID=864 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-04 21:35:56] 2025-06-05 01:35:39,554 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:35:56] 2025-06-05 01:35:39,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:35:56] 2025-06-05 01:35:39,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:35:56] 2025-06-05 01:35:39,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:35:56] 2025-06-05 01:35:39,982 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:39,982 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:39,983 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:40,062 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:40,073 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:40,149 | INFO     | [job] control thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:40,157 | INFO     | [data] control thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:40,257 | INFO     | [payload] control thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:40,392 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:40,635 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:40,917 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:41,206 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:41,227 | INFO     | [job] validate thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:41,787 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:42,983 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:49,109 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:35:56] 2025-06-05 01:35:50,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:35:56] 2025-06-05 01:35:50,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234544809792)>', '<ExcThread(monitor, started 140233836328704)>']
[2025-06-04 21:35:56] 2025-06-05 01:35:51,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:35:56] 2025-06-05 01:35:51,607 | INFO     | [monitor] control thread has ended
[2025-06-04 21:35:56] 2025-06-05 01:35:55,870 | INFO     | all workflow threads have been joined
[2025-06-04 21:35:56] 2025-06-05 01:35:55,870 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:35:56] 2025-06-05 01:35:55,870 | INFO     | traces error code: 0
[2025-06-04 21:35:56] 2025-06-05 01:35:55,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:35:56] 2025-06-05 01:35:55,965 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:35:56] 2025-06-05 01:35:55,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:35:56] 2025-06-05 01:35:55,973 [wrapper] pilotpid: 864
[2025-06-04 21:35:56] 2025-06-05 01:35:55,976 [wrapper] Pilot exit status: 0
[2025-06-04 21:35:56] 2025-06-05 01:35:55,991 [wrapper] pandaids: 6680207877
[2025-06-04 21:35:56] 2025-06-05 01:35:56,027 [wrapper] cleanup supervisor_pilot  2208 865
[2025-06-04 21:35:56] 2025-06-05 01:35:56,031 [wrapper] Test setup, not cleaning
[2025-06-04 21:35:56] 2025-06-05 01:35:56,035 [wrapper] apfmon messages muted
[2025-06-04 21:35:56] 2025-06-05 01:35:56,039 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:35:56] 2025-06-05 01:35:56,043 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:35:56]  *** Error codes and diagnostics ***
[2025-06-04 21:35:56]     "exeErrorCode": 0,
[2025-06-04 21:35:56]     "exeErrorDiag": "",
[2025-06-04 21:35:56]     "pilotErrorCode": 0,
[2025-06-04 21:35:56]     "pilotErrorDiag": "",
[2025-06-04 21:35:56]  *** Listing of results directory ***
[2025-06-04 21:35:56] total 413960
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 19:52 pilot3.tar.gz
[2025-06-04 21:35:56] -rwx------ 1 boincer umatlas     37140 Jun  4 20:04 runpilot2-wrapper.sh
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 20:04 queuedata.json
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas       100 Jun  4 20:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:35:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 20:05 run_atlas
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas       105 Jun  4 20:05 job.xml
[2025-06-04 21:35:56] -rw-r--r-- 2 boincer umatlas 223025845 Jun  4 20:05 EVNT.44871834._001420.pool.root.1
[2025-06-04 21:35:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:05 start_atlas.sh
[2025-06-04 21:35:56] drwxrwx--x 2 boincer umatlas      4096 Jun  4 20:05 shared
[2025-06-04 21:35:56] -rw-r--r-- 2 boincer umatlas    508874 Jun  4 20:05 input.tar.gz
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas         0 Jun  4 20:05 boinc_lockfile
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas      2557 Jun  4 20:05 pandaJob.out
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas    987117 Jun  4 20:05 agis_schedconf.cvmfs.json
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas   1598969 Jun  4 20:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:35:56] drwx------ 4 boincer umatlas      4096 Jun  4 20:05 pilot3
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 21:27 init_data.xml
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas       529 Jun  4 21:34 boinc_task_state.xml
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas 195310597 Jun  4 21:34 HITS.44871837._102259.pool.root.1
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas      1045 Jun  4 21:35 memory_monitor_summary.json
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas        27 Jun  4 21:35 wrapper_checkpoint.txt
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:35 boinc_mmap_file
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas    357586 Jun  4 21:35 log.44871837._102259.job.log.tgz.1
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas        95 Jun  4 21:35 pilot_heartbeat.json
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas      7748 Jun  4 21:35 heartbeat.json
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas      4740 Jun  4 21:35 pilotlog.txt
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas    506451 Jun  4 21:35 log.44871837._102259.job.log.1
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas       357 Jun  4 21:35 output.list
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:35 runtime_log
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas    880640 Jun  4 21:35 result.tar.gz
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 21:35 runtime_log.err
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas       659 Jun  4 21:35 aKMMDmvGDh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt3nKDmBSMOon.diag
[2025-06-04 21:35:56] -rw-r--r-- 1 boincer umatlas     22267 Jun  4 21:35 stderr.txt
[2025-06-04 21:35:56] HITS file was successfully produced:
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas 195310597 Jun  4 21:34 shared/HITS.pool.root.1
[2025-06-04 21:35:56]  *** Contents of shared directory: ***
[2025-06-04 21:35:56] total 409920
[2025-06-04 21:35:56] -rw-r--r-- 2 boincer umatlas 223025845 Jun  4 20:05 ATLAS.root_0
[2025-06-04 21:35:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:05 start_atlas.sh
[2025-06-04 21:35:56] -rw-r--r-- 2 boincer umatlas    508874 Jun  4 20:05 input.tar.gz
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas 195310597 Jun  4 21:34 HITS.pool.root.1
[2025-06-04 21:35:56] -rw------- 1 boincer umatlas    880640 Jun  4 21:35 result.tar.gz
21:35:57 (29405): run_atlas exited; CPU time 58699.410064
21:35:57 (29405): called boinc_finish(0)

</stderr_txt>
]]>

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