Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:02:55 (798): wrapper (7.7.26015): starting
20:02:55 (798): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 20:02:55] Arguments: --nthreads 8
[2025-06-04 20:02:55] Threads: 8
[2025-06-04 20:02:55] Checking for CVMFS
[2025-06-04 20:02:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:02:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:02:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:02:55] 2.11.2.0 3213 441313 244272 146798 0 16 15234809 20275201 139 130560 0 130946583 99.991 19463469 18274 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 20:02:55] CVMFS is ok
[2025-06-04 20:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:02:55] Further information can be found at the LHC@home message board.
[2025-06-04 20:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:02:55] Checking for apptainer binary...
[2025-06-04 20:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:02:55] Running /usr/bin/apptainer --version
[2025-06-04 20:02:55] apptainer version 1.3.2-1.el7
[2025-06-04 20:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:02:56] c-205-38.aglt2.org
[2025-06-04 20:02:56] apptainer works
[2025-06-04 20:02:56] Set ATHENA_PROC_NUMBER=8
[2025-06-04 20:02:56] Set ATHENA_CORE_NUMBER=8
[2025-06-04 20:02:56] Starting ATLAS job with PandaID=6668325908
[2025-06-04 20:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:11:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:11:48]  is_altstaged=None
[2025-06-04 21:11:48]  is_tar=False
[2025-06-04 21:11:48]  lfn=log.44871837._082374.job.log.tgz.1
[2025-06-04 21:11:48]  mtime=0
[2025-06-04 21:11:48]  protocol_id=None
[2025-06-04 21:11:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 21:11:48]  replicas=None
[2025-06-04 21:11:48]  scope=mc23_13p6TeV
[2025-06-04 21:11:48]  status=None
[2025-06-04 21:11:48]  status_code=0
[2025-06-04 21:11:48]  storage_token=
[2025-06-04 21:11:48]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6668325908/log.44871837._082374.job.log.tgz.1
[2025-06-04 21:11:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/7f/log.44871837._082374.job.log.tgz.1
[2025-06-04 21:11:48]  workdir=None
[2025-06-04 21:11:48] ]
[2025-06-04 21:11:48] 2025-06-05 01:11:23,611 | INFO     | transferring file log.44871837._082374.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668325908/log.44871837._082374.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 21:11:48] 2025-06-05 01:11:23,612 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668325908/log.44871837._082374.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._082374.job
[2025-06-04 21:11:48] 2025-06-05 01:11:23,628 | INFO     | adding to output.list: log.44871837._082374.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/7f/log.44871837._082374.job.log.tg
[2025-06-04 21:11:48] 2025-06-05 01:11:23,629 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:11:48] 2025-06-05 01:11:23,629 | INFO     | summary of transferred files:
[2025-06-04 21:11:48] 2025-06-05 01:11:23,629 | INFO     |  -- lfn=log.44871837._082374.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:11:48] 2025-06-05 01:11:23,629 | INFO     | stage-out finished correctly
[2025-06-04 21:11:48] 2025-06-05 01:11:24,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:11:48] 2025-06-05 01:11:25,026 | INFO     | job 6668325908 has state=finished
[2025-06-04 21:11:48] 2025-06-05 01:11:25,027 | INFO     | preparing for final server update for job 6668325908 in state='finished'
[2025-06-04 21:11:48] 2025-06-05 01:11:25,027 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:11:48] 2025-06-05 01:11:25,027 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:11:48] 2025-06-05 01:11:25,027 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:11:48] 2025-06-05 01:11:25,028 | INFO     | job 6668325908 has finished - writing final server update
[2025-06-04 21:11:48] 2025-06-05 01:11:25,028 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:11:48] 2025-06-05 01:11:25,030 | INFO     | executing command: lscpu
[2025-06-04 21:11:48] 2025-06-05 01:11:25,062 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:11:48] 2025-06-05 01:11:25,571 | INFO     | monitor loop #308: job 0:6668325908 is in state 'finished'
[2025-06-04 21:11:48] 2025-06-05 01:11:25,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:11:48] 2025-06-05 01:11:28,074 | INFO     | monitor loop #309: job 0:6668325908 is in state 'finished'
[2025-06-04 21:11:48] 2025-06-05 01:11:28,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:11:48] 2025-06-05 01:11:28,288 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 21:11:48] 2025-06-05 01:11:28,288 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668325908/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:11:48] 2025-06-05 01:11:28,288 | INFO     | extracted standard info from prmon json
[2025-06-04 21:11:48] 2025-06-05 01:11:28,289 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:11:48] 2025-06-05 01:11:28,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:11:48] 2025-06-05 01:11:28,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:11:48] 2025-06-05 01:11:28,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | sum of square deviations: 66959395.0
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | sum of deviations: -894806102.5000002
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | mean x: 1749083909.5
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | mean y: 2534152.0833333335
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | -- intersect: 23376266187.82168
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | intersect: 23376266187.82168
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | chi2: 0.011606408606262318
[2025-06-04 21:11:48] 2025-06-05 01:11:28,290 | INFO     | -- intersect: 23376266187.82168
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | current memory leak: -13.36 B/s (using 60 data points, chi2=0.01)
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | ..............................
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | . Timing measurements:
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | . get job = 0 s
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | . initial setup = 2 s
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | . payload setup = 4 s
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | . stage-in = 0 s
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | . payload execution = 4076 s
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | . stage-out = 0 s
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | . log creation = 0 s
[2025-06-04 21:11:48] 2025-06-05 01:11:28,291 | INFO     | ..............................
[2025-06-04 21:11:48] 2025-06-05 01:11:28,771 | INFO     | 
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | job summary report
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | --------------------------------------------------
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | PanDA job id: 6668325908
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | task id: 44871837
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | errors: (none)
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | pilot state: finished 
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | transexitcode: 0
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | exeerrorcode: 0
[2025-06-04 21:11:48] 2025-06-05 01:11:28,772 | INFO     | exeerrordiag: 
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | exitcode: 0
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | exitmsg: OK
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | cpuconsumptiontime: 30205 s
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | nevents: 400
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | neventsw: 0
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | pid: 23707
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | pgrp: 23707
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | corecount: 8
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | event service: False
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | sizes: {0: 2397342, 3: 2397548, 11: 2397576, 4084: 2423449, 4085: 2432418, 4086: 2432474, 4090: 2432772}
[2025-06-04 21:11:48] 2025-06-05 01:11:28,773 | INFO     | --------------------------------------------------
[2025-06-04 21:11:48] 2025-06-05 01:11:28,774 | INFO     | 
[2025-06-04 21:11:48] 2025-06-05 01:11:28,774 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 21:11:48] 2025-06-05 01:11:28,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:11:48] 2025-06-05 01:11:28,793 | INFO     | job 6668325908 has completed (purged errors)
[2025-06-04 21:11:48] 2025-06-05 01:11:28,794 | INFO     | overall cleanup function is called
[2025-06-04 21:11:48] 2025-06-05 01:11:29,800 | INFO     | --- collectZombieJob: --- 10, [23707]
[2025-06-04 21:11:48] 2025-06-05 01:11:29,800 | INFO     | zombie collector waiting for pid 23707
[2025-06-04 21:11:48] 2025-06-05 01:11:29,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:11:48] 2025-06-05 01:11:29,801 | INFO     | collected zombie processes
[2025-06-04 21:11:48] 2025-06-05 01:11:29,801 | INFO     | will attempt to kill all subprocesses of pid=23707
[2025-06-04 21:11:48] 2025-06-05 01:11:29,897 | INFO     | process IDs to be killed: [23707] (in reverse order)
[2025-06-04 21:11:48] 2025-06-05 01:11:29,936 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:11:48] 2025-06-05 01:11:29,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:11:48] 2025-06-05 01:11:29,939 | INFO     | did not find any defunct processes belonging to 23707
[2025-06-04 21:11:48] 2025-06-05 01:11:29,941 | INFO     | did not find any defunct processes belonging to 23707
[2025-06-04 21:11:48] 2025-06-05 01:11:29,941 | INFO     | ready for new job
[2025-06-04 21:11:48] 2025-06-05 01:11:29,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:11:48] 2025-06-05 01:11:29,943 | INFO     | **************************************
[2025-06-04 21:11:48] 2025-06-05 01:11:29,943 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:11:48] 2025-06-05 01:11:29,943 | INFO     | **************************************
[2025-06-04 21:11:48] 2025-06-05 01:11:29,943 | INFO     | 
[2025-06-04 21:11:48] 2025-06-05 01:11:29,944 | INFO     | architecture information:
[2025-06-04 21:11:48] 2025-06-05 01:11:29,944 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:11:48] 2025-06-05 01:11:29,953 | INFO     | cat /etc/os-release:
[2025-06-04 21:11:48] NAME="CentOS Linux"
[2025-06-04 21:11:48] VERSION="7 (Core)"
[2025-06-04 21:11:48] ID="centos"
[2025-06-04 21:11:48] ID_LIKE="rhel fedora"
[2025-06-04 21:11:48] VERSION_ID="7"
[2025-06-04 21:11:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:11:48] ANSI_COLOR="0;31"
[2025-06-04 21:11:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:11:48] HOME_URL="https://www.centos.org/"
[2025-06-04 21:11:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:11:48] 
[2025-06-04 21:11:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:11:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:11:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:11:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:11:48] 
[2025-06-04 21:11:48] 2025-06-05 01:11:29,954 | INFO     | **************************************
[2025-06-04 21:11:48] 2025-06-05 01:11:30,456 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 21:11:48] 2025-06-05 01:11:30,471 | INFO     | sufficient remaining disk space (32629587968 B)
[2025-06-04 21:11:48] 2025-06-05 01:11:30,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:11:48] 2025-06-05 01:11:30,472 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:11:48] 2025-06-05 01:11:30,472 | INFO     | update_server=False
[2025-06-04 21:11:48] 2025-06-05 01:11:30,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:11:48] 2025-06-05 01:11:30,496 | INFO     | all data control threads have been joined
[2025-06-04 21:11:48] 2025-06-05 01:11:30,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:11:48] 2025-06-05 01:11:30,577 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:11:48] 2025-06-05 01:11:30,578 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:11:48] 2025-06-05 01:11:30,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:11:48] 2025-06-05 01:11:30,578 | INFO     | will abort loop
[2025-06-04 21:11:48] 2025-06-05 01:11:30,603 | INFO     | PID=6560 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 21:11:48] 2025-06-05 01:11:30,603 | INFO     | .. there are 2 such processes running
[2025-06-04 21:11:48] 2025-06-05 01:11:30,603 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:11:48] 2025-06-05 01:11:30,603 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:11:48] 2025-06-05 01:11:30,603 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:11:48] 2025-06-05 01:11:31,200 | INFO     | all job control threads have been joined
[2025-06-04 21:11:48] 2025-06-05 01:11:31,478 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:31,501 | INFO     | all payload control threads have been joined
[2025-06-04 21:11:48] 2025-06-05 01:11:31,502 | INFO     | [data] control thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:31,583 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:31,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:11:48] 2025-06-05 01:11:31,749 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:32,142 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:32,206 | INFO     | [job] control thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:32,505 | INFO     | [payload] control thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:32,683 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:32,727 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:32,774 | INFO     | [job] validate thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:32,866 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:32,924 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:33,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:11:48] 2025-06-05 01:11:33,713 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:34,349 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:34,543 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:40,727 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:11:48] 2025-06-05 01:11:41,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:11:48] 2025-06-05 01:11:43,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998739416896)>', '<ExcThread(monitor, started 139997990602496)>']
[2025-06-04 21:11:48] 2025-06-05 01:11:43,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:11:48] 2025-06-05 01:11:43,667 | INFO     | [monitor] control thread has ended
[2025-06-04 21:11:48] 2025-06-05 01:11:48,595 | INFO     | all workflow threads have been joined
[2025-06-04 21:11:48] 2025-06-05 01:11:48,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:11:48] 2025-06-05 01:11:48,596 | INFO     | traces error code: 0
[2025-06-04 21:11:48] 2025-06-05 01:11:48,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:11:48] 2025-06-05 01:11:48,686 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:11:48] 2025-06-05 01:11:48,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:11:48] 2025-06-05 01:11:48,693 [wrapper] pilotpid: 6560
[2025-06-04 21:11:48] 2025-06-05 01:11:48,696 [wrapper] Pilot exit status: 0
[2025-06-04 21:11:48] 2025-06-05 01:11:48,707 [wrapper] pandaids: 6668325908
[2025-06-04 21:11:48] 2025-06-05 01:11:48,737 [wrapper] cleanup supervisor_pilot 14908 6561
[2025-06-04 21:11:48] 2025-06-05 01:11:48,740 [wrapper] Test setup, not cleaning
[2025-06-04 21:11:48] 2025-06-05 01:11:48,743 [wrapper] apfmon messages muted
[2025-06-04 21:11:48] 2025-06-05 01:11:48,746 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:11:48] 2025-06-05 01:11:48,749 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:11:48]  *** Error codes and diagnostics ***
[2025-06-04 21:11:48]     "exeErrorCode": 0,
[2025-06-04 21:11:48]     "exeErrorDiag": "",
[2025-06-04 21:11:48]     "pilotErrorCode": 0,
[2025-06-04 21:11:48]     "pilotErrorDiag": "",
[2025-06-04 21:11:48]  *** Listing of results directory ***
[2025-06-04 21:11:48] total 421724
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas    495897 May 28 05:38 pilot3.tar.gz
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas      5111 May 28 05:45 queuedata.json
[2025-06-04 21:11:48] -rwx------ 1 boincer umatlas     37140 May 28 05:46 runpilot2-wrapper.sh
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas       100 Jun  4 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:11:48] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 20:02 run_atlas
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas       105 Jun  4 20:02 job.xml
[2025-06-04 21:11:48] -rw-r--r-- 2 boincer umatlas 225810164 Jun  4 20:02 EVNT.44871834._001687.pool.root.1
[2025-06-04 21:11:48] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:02 start_atlas.sh
[2025-06-04 21:11:48] drwxrwx--x 2 boincer umatlas      4096 Jun  4 20:02 shared
[2025-06-04 21:11:48] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 20:02 input.tar.gz
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas         0 Jun  4 20:02 boinc_lockfile
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 20:02 pandaJob.out
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas    987117 Jun  4 20:03 agis_schedconf.cvmfs.json
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas   1598969 Jun  4 20:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:11:48] drwx------ 4 boincer umatlas      4096 Jun  4 20:03 pilot3
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas      6051 Jun  4 21:09 init_data.xml
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas        95 Jun  4 21:10 pilot_heartbeat.json
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas 200787261 Jun  4 21:10 HITS.44871837._082374.pool.root.1
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 21:11 boinc_mmap_file
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas        27 Jun  4 21:11 wrapper_checkpoint.txt
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas       529 Jun  4 21:11 boinc_task_state.xml
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas      1036 Jun  4 21:11 memory_monitor_summary.json
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas    293845 Jun  4 21:11 log.44871837._082374.job.log.tgz.1
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas      7724 Jun  4 21:11 heartbeat.json
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas      5002 Jun  4 21:11 pilotlog.txt
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas    414842 Jun  4 21:11 log.44871837._082374.job.log.1
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas       357 Jun  4 21:11 output.list
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas       620 Jun  4 21:11 runtime_log
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas    727040 Jun  4 21:11 result.tar.gz
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas       657 Jun  4 21:11 xhiMDmKYSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXqbKDmpPiAUn.diag
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 21:11 runtime_log.err
[2025-06-04 21:11:48] -rw-r--r-- 1 boincer umatlas     21400 Jun  4 21:11 stderr.txt
[2025-06-04 21:11:48] HITS file was successfully produced:
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas 200787261 Jun  4 21:10 shared/HITS.pool.root.1
[2025-06-04 21:11:48]  *** Contents of shared directory: ***
[2025-06-04 21:11:48] total 417836
[2025-06-04 21:11:48] -rw-r--r-- 2 boincer umatlas 225810164 Jun  4 20:02 ATLAS.root_0
[2025-06-04 21:11:48] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 20:02 start_atlas.sh
[2025-06-04 21:11:48] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 20:02 input.tar.gz
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas 200787261 Jun  4 21:10 HITS.pool.root.1
[2025-06-04 21:11:48] -rw------- 1 boincer umatlas    727040 Jun  4 21:11 result.tar.gz
21:11:50 (798): run_atlas exited; CPU time 30175.276294
21:11:50 (798): called boinc_finish(0)

</stderr_txt>
]]>

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